RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C YJR120WP47157 116 aa4.14□□□□□ -1.75
ATG38YLR211C GFD1Q04839 188 aaKnown RBP4.14□□□□□ -1.75
ATG38YLR211C HRD3Q05787 833 aa4.14□□□□□ -1.75
ATG38YLR211C ORM2Q06144 216 aa4.14□□□□□ -1.75
ATG38YLR211C BSP1Q06604 576 aa4.14□□□□□ -1.75
ATG38YLR211C Q0010Q9ZZX9 128 aa4.14□□□□□ -1.75
ATG38YLR211C COX11P19516 300 aaKnown RBP4.13□□□□□ -1.75
ATG38YLR211C MRPL9P31334 269 aa4.13□□□□□ -1.75
ATG38YLR211C GRX4P32642 244 aa4.13□□□□□ -1.75
ATG38YLR211C YBR071WP38243 211 aa4.13□□□□□ -1.75
ATG38YLR211C BPL1P48445 690 aaPredicted RBP4.13□□□□□ -1.75
ATG38YLR211C COS12P53053 380 aa4.13□□□□□ -1.75
ATG38YLR211C RDL1Q12305 139 aaKnown RBP4.13□□□□□ -1.75
ATG38YLR211C TMA17Q12513 150 aa4.13□□□□□ -1.75
ATG38YLR211C YNR071CP53757 342 aa4.12□□□□□ -1.75
ATG38YLR211C SPN1Q06505 410 aaPredicted RBP4.12□□□□□ -1.75
ATG38YLR211C IRC3Q06683 689 aa4.12□□□□□ -1.75
ATG38YLR211C BET2P20133 325 aa4.11□□□□□ -1.75
ATG38YLR211C GDA1P32621 518 aa4.11□□□□□ -1.75
ATG38YLR211C APD1P38281 316 aa4.11□□□□□ -1.75
ATG38YLR211C STB5P38699 743 aa4.11□□□□□ -1.75
ATG38YLR211C OPT1P40897 799 aa4.11□□□□□ -1.75
ATG38YLR211C SPC105P53148 917 aa4.11□□□□□ -1.75
ATG38YLR211C YGL081WP53156 320 aa4.11□□□□□ -1.75
ATG38YLR211C COG6P53959 839 aa4.11□□□□□ -1.75
ATG38YLR211C MPS1P54199 764 aa4.11□□□□□ -1.75
ATG38YLR211C RAD33Q04231 177 aa4.11□□□□□ -1.75
ATG38YLR211C SDH8P38345 138 aa4.1□□□□□ -1.75
ATG38YLR211C VPS8P39702 1274 aa4.1□□□□□ -1.75
ATG38YLR211C MDR1P53258 950 aa4.1□□□□□ -1.75
ATG38YLR211C YML119WQ03208 357 aa4.1□□□□□ -1.75
ATG38YLR211C CYK3Q07533 885 aa4.1□□□□□ -1.75
ATG38YLR211C TRE2Q08693 809 aa4.1□□□□□ -1.75
ATG38YLR211C AHA1Q12449 350 aaKnown RBP4.1□□□□□ -1.75
ATG38YLR211C YMR085WP0CF18 432 aa4.09□□□□□ -1.75
ATG38YLR211C SEC12P11655 471 aa4.09□□□□□ -1.75
ATG38YLR211C AMD2P22580 549 aa4.09□□□□□ -1.75
ATG38YLR211C STL1P39932 569 aa4.09□□□□□ -1.75
ATG38YLR211C ATG36P46983 293 aa4.09□□□□□ -1.75
ATG38YLR211C SLD3P53135 668 aa4.09□□□□□ -1.75
ATG38YLR211C YPL068CQ02749 293 aa4.09□□□□□ -1.75
ATG38YLR211C URE2P23202 354 aaKnown RBP4.08□□□□□ -1.76
ATG38YLR211C SNO3P43544 222 aa4.08□□□□□ -1.76
ATG38YLR211C IDP3P53982 420 aaKnown RBP4.08□□□□□ -1.76
ATG38YLR211C ERG13P54839 491 aaKnown RBP4.08□□□□□ -1.76
ATG38YLR211C CBP3P21560 335 aa4.07□□□□□ -1.76
ATG38YLR211C MAK32P23060 363 aa4.07□□□□□ -1.76
ATG38YLR211C RRP43P25359 394 aaPredicted RBP4.07□□□□□ -1.76
ATG38YLR211C PLC1P32383 869 aa4.07□□□□□ -1.76
ATG38YLR211C PET309P32522 965 aaPredicted RBP4.07□□□□□ -1.76
ATG38YLR211C IMD2P38697 523 aaKnown RBP4.07□□□□□ -1.76
ATG38YLR211C GSM1P42950 618 aa4.07□□□□□ -1.76
ATG38YLR211C IMD3P50095 523 aaKnown RBP4.07□□□□□ -1.76
ATG38YLR211C PEX15Q08215 383 aa4.07□□□□□ -1.76
ATG38YLR211C CRT10Q08226 957 aa4.07□□□□□ -1.76
ATG38YLR211C YAP1P19880 650 aaKnown RBP4.06□□□□□ -1.76
ATG38YLR211C PRP45P28004 379 aaPredicted RBP4.06□□□□□ -1.76
ATG38YLR211C TFC4P33339 1025 aa4.06□□□□□ -1.76
ATG38YLR211C YIL092WP40497 633 aa4.06□□□□□ -1.76
ATG38YLR211C TPO3Q06451 622 aa4.06□□□□□ -1.76
ATG38YLR211C HOS1Q12214 470 aa4.06□□□□□ -1.76
ATG38YLR211C CRC1Q12289 327 aa4.06□□□□□ -1.76
ATG38YLR211C DBP10Q12389 995 aaKnown RBP4.06□□□□□ -1.76
ATG38YLR211C PNO1Q99216 274 aaKnown RBP4.06□□□□□ -1.76
ATG38YLR211C YPT1P01123 206 aaKnown RBP4.05□□□□□ -1.76
ATG38YLR211C YER190C-BP0CX94 160 aa4.05□□□□□ -1.76
ATG38YLR211C YEL077W-AP0CX95 160 aa4.05□□□□□ -1.76
ATG38YLR211C YGR296C-BP0CX96 160 aa4.05□□□□□ -1.76
ATG38YLR211C YPL283W-BP0CX97 160 aa4.05□□□□□ -1.76
ATG38YLR211C YPR204C-AP0CX98 160 aa4.05□□□□□ -1.76
ATG38YLR211C PRE2P30656 287 aaKnown RBP4.05□□□□□ -1.76
ATG38YLR211C UBP16Q02863 499 aa4.05□□□□□ -1.76
ATG38YLR211C SLX4Q12098 748 aa4.05□□□□□ -1.76
ATG38YLR211C LCB4Q12246 624 aa4.05□□□□□ -1.76
ATG38YLR211C CHO2P05374 869 aaKnown RBP4.04□□□□□ -1.76
ATG38YLR211C ARO9P38840 513 aaPredicted RBP4.04□□□□□ -1.76
ATG38YLR211C SSP120P39931 234 aaKnown RBP4.04□□□□□ -1.76
ATG38YLR211C EMP65P40085 556 aa4.04□□□□□ -1.76
ATG38YLR211C HOL1P53389 586 aa4.04□□□□□ -1.76
ATG38YLR211C TDA9Q04545 1251 aa4.04□□□□□ -1.76
ATG38YLR211C RAD34Q06665 692 aa4.04□□□□□ -1.76
ATG38YLR211C RTC1Q08281 1341 aa4.03□□□□□ -1.76
ATG38YLR211C SAP1P39955 897 aaKnown RBP4.03□□□□□ -1.76
ATG38YLR211C IRC8P47046 822 aa4.03□□□□□ -1.76
ATG38YLR211C ACS1Q01574 713 aa4.03□□□□□ -1.76
ATG38YLR211C YPL071CQ02864 156 aa4.03□□□□□ -1.76
ATG38YLR211C ENT2Q05785 613 aa4.03□□□□□ -1.76
ATG38YLR211C TSR4P25040 408 aa4.02□□□□□ -1.77
ATG38YLR211C YCR061WP25639 631 aa4.02□□□□□ -1.77
ATG38YLR211C PAF1P38351 445 aa4.02□□□□□ -1.77
ATG38YLR211C MTG2P38860 518 aa4.02□□□□□ -1.77
ATG38YLR211C SCS2P40075 244 aaKnown RBP4.02□□□□□ -1.77
ATG38YLR211C YIL024CP40543 189 aa4.02□□□□□ -1.77
ATG38YLR211C MNT3P40549 630 aa4.02□□□□□ -1.77
ATG38YLR211C CIN1P40987 1014 aa4.02□□□□□ -1.77
ATG38YLR211C IRC7P43623 340 aa4.02□□□□□ -1.77
ATG38YLR211C PUS4P48567 403 aaKnown RBP4.02□□□□□ -1.77
ATG38YLR211C SCS3P53012 380 aa4.02□□□□□ -1.77
ATG38YLR211C TRS31Q03337 283 aa4.02□□□□□ -1.77
ATG38YLR211C YML053CQ04978 212 aa4.02□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms