RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C YAP3P38749 330 aa4.8□□□□□ -1.64
USB1YLR132C PRM2P40534 656 aa4.8□□□□□ -1.64
USB1YLR132C ASK10P48361 1146 aa4.8□□□□□ -1.64
USB1YLR132C PIP2P52960 996 aa4.8□□□□□ -1.64
USB1YLR132C ATG4P53867 494 aa4.8□□□□□ -1.64
USB1YLR132C APM1Q00776 475 aaPredicted RBP4.8□□□□□ -1.64
USB1YLR132C MAK10Q02197 733 aa4.8□□□□□ -1.64
USB1YLR132C FDC1Q03034 503 aa4.8□□□□□ -1.64
USB1YLR132C VMS1Q04311 632 aaKnown RBP4.8□□□□□ -1.64
USB1YLR132C HLR1Q04429 423 aa4.8□□□□□ -1.64
USB1YLR132C NUR1Q12066 484 aa4.8□□□□□ -1.64
USB1YLR132C HOS1Q12214 470 aa4.8□□□□□ -1.64
USB1YLR132C THR1P17423 357 aaKnown RBP4.79□□□□□ -1.64
USB1YLR132C HOP1P20050 605 aa4.79□□□□□ -1.64
USB1YLR132C CWH43P25618 953 aa4.79□□□□□ -1.64
USB1YLR132C YEL025CP39991 1188 aa4.79□□□□□ -1.64
USB1YLR132C EAF5P39995 279 aa4.79□□□□□ -1.64
USB1YLR132C MPS3P47069 682 aa4.79□□□□□ -1.64
USB1YLR132C RFX1P48743 811 aa4.79□□□□□ -1.64
USB1YLR132C PEF1P53238 335 aa4.79□□□□□ -1.64
USB1YLR132C CEF1Q03654 590 aaPredicted RBP4.79□□□□□ -1.64
USB1YLR132C YNL162W-AQ3E7A8 72 aa4.79□□□□□ -1.64
USB1YLR132C GAL1P04385 528 aa4.78□□□□□ -1.64
USB1YLR132C HMG2P12684 1045 aa4.78□□□□□ -1.64
USB1YLR132C SPO11P23179 398 aa4.78□□□□□ -1.64
USB1YLR132C FUB1P25659 250 aa4.78□□□□□ -1.64
USB1YLR132C TGL1P34163 548 aa4.78□□□□□ -1.64
USB1YLR132C APL3P38065 1025 aa4.78□□□□□ -1.64
USB1YLR132C CTP1P38152 299 aa4.78□□□□□ -1.64
USB1YLR132C YEL020CP39994 560 aa4.78□□□□□ -1.64
USB1YLR132C YSH1Q06224 779 aaPredicted RBP4.78□□□□□ -1.64
USB1YLR132C YCG1Q06680 1035 aa4.78□□□□□ -1.64
USB1YLR132C YDL086WQ07505 273 aa4.78□□□□□ -1.64
USB1YLR132C USV1Q12132 391 aa4.78□□□□□ -1.64
USB1YLR132C RRP6Q12149 733 aaKnown RBP4.78□□□□□ -1.64
USB1YLR132C MDM10P18409 493 aa4.77□□□□□ -1.65
USB1YLR132C SET3P36124 751 aa4.77□□□□□ -1.65
USB1YLR132C CRG1P38892 291 aaRIP-Chip data4.77□□□□□ -1.65not detected
USB1YLR132C FTR1P40088 404 aa4.77□□□□□ -1.65
USB1YLR132C VPS27P40343 622 aaKnown RBP4.77□□□□□ -1.65
USB1YLR132C HIS6P40545 261 aa4.77□□□□□ -1.65
USB1YLR132C THI6P41835 540 aa4.77□□□□□ -1.65
USB1YLR132C YSP2Q06681 1438 aa4.77□□□□□ -1.65
USB1YLR132C VAS1P07806 1104 aaKnown RBP4.76□□□□□ -1.65
USB1YLR132C PHO81P17442 1178 aa4.76□□□□□ -1.65
USB1YLR132C PET309P32522 965 aaPredicted RBP4.76□□□□□ -1.65
USB1YLR132C DHR2P36009 735 aaPredicted RBP4.76□□□□□ -1.65
USB1YLR132C TMN3P40071 706 aa4.76□□□□□ -1.65
USB1YLR132C KHA1P40309 873 aa4.76□□□□□ -1.65
USB1YLR132C YGR151CP53287 111 aa4.76□□□□□ -1.65
USB1YLR132C TRI1Q05024 226 aa4.76□□□□□ -1.65
USB1YLR132C TY1B-NL2Q99337 1749 aaKnown RBP4.76□□□□□ -1.65
USB1YLR132C YBT1P32386 1661 aa4.76□□□□□ -1.65
USB1YLR132C RPN13O13563 156 aa4.75□□□□□ -1.65
USB1YLR132C PTH2P34222 208 aa4.75□□□□□ -1.65
USB1YLR132C RMA1P36001 430 aaKnown RBP4.75□□□□□ -1.65
USB1YLR132C PPE1P38796 400 aa4.75□□□□□ -1.65
USB1YLR132C SCS2P40075 244 aaKnown RBP4.75□□□□□ -1.65
USB1YLR132C SNM1P40993 198 aa4.75□□□□□ -1.65
USB1YLR132C MNT2P53059 558 aa4.75□□□□□ -1.65
USB1YLR132C TEP1P53916 434 aa4.75□□□□□ -1.65
USB1YLR132C UBX4P54730 416 aa4.75□□□□□ -1.65
USB1YLR132C DAK1P54838 584 aaKnown RBP4.75□□□□□ -1.65
USB1YLR132C THI7Q05998 598 aa4.75□□□□□ -1.65
USB1YLR132C YOL114CQ12322 202 aa4.75□□□□□ -1.65
USB1YLR132C ARP7Q12406 477 aa4.75□□□□□ -1.65
USB1YLR132C TUP1P16649 713 aa4.74□□□□□ -1.65
USB1YLR132C CBP3P21560 335 aa4.74□□□□□ -1.65
USB1YLR132C MSH1P25846 959 aa4.74□□□□□ -1.65
USB1YLR132C CDS1P38221 457 aa4.74□□□□□ -1.65
USB1YLR132C FAF1P40546 346 aaPredicted RBP4.74□□□□□ -1.65
USB1YLR132C ATG36P46983 293 aa4.74□□□□□ -1.65
USB1YLR132C NUP188P52593 1655 aaKnown RBP4.73□□□□□ -1.65
USB1YLR132C DPB3P27344 201 aa4.73□□□□□ -1.65
USB1YLR132C MTC7P32633 139 aa4.73□□□□□ -1.65
USB1YLR132C GMH1P36125 273 aa4.73□□□□□ -1.65
USB1YLR132C YJL193WP39542 402 aa4.73□□□□□ -1.65
USB1YLR132C SPC98P53540 846 aa4.73□□□□□ -1.65
USB1YLR132C IZH3Q07959 543 aa4.73□□□□□ -1.65
USB1YLR132C VPS33P20795 691 aa4.72□□□□□ -1.65
USB1YLR132C CAP1P28495 268 aaKnown RBP4.72□□□□□ -1.65
USB1YLR132C ELF1P36053 145 aa4.72□□□□□ -1.65
USB1YLR132C EHT1P38295 451 aa4.72□□□□□ -1.65
USB1YLR132C KSP1P38691 1029 aaKnown RBP4.72□□□□□ -1.65
USB1YLR132C MUP3P38734 546 aa4.72□□□□□ -1.65
USB1YLR132C YLF2P38746 405 aa4.72□□□□□ -1.65
USB1YLR132C SWD1P39706 426 aa4.72□□□□□ -1.65
USB1YLR132C MAD2P40958 196 aa4.72□□□□□ -1.65
USB1YLR132C QRI7P43122 407 aa4.72□□□□□ -1.65
USB1YLR132C PUS4P48567 403 aaKnown RBP4.72□□□□□ -1.65
USB1YLR132C YGR054WP53235 642 aaKnown RBP4.72□□□□□ -1.65
USB1YLR132C DIP5P53388 608 aa4.72□□□□□ -1.65
USB1YLR132C YNR071CP53757 342 aa4.72□□□□□ -1.65
USB1YLR132C TIM50Q02776 476 aa4.72□□□□□ -1.65
USB1YLR132C UFO1Q04511 668 aa4.72□□□□□ -1.65
USB1YLR132C BMS1Q08965 1183 aaKnown RBP4.72□□□□□ -1.65
USB1YLR132C RTK1Q12100 620 aaPredicted RBP4.72□□□□□ -1.65
USB1YLR132C DBP10Q12389 995 aaKnown RBP4.72□□□□□ -1.65
USB1YLR132C IML1P47170 1584 aa4.72□□□□□ -1.65
USB1YLR132C URA3P03962 267 aa4.71□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms