RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W SPO1P53541 631 aa2.25□□□□□ -2.05
CFT2YLR115W YNL018CP53976 612 aa2.25□□□□□ -2.05
CFT2YLR115W EFR3Q03653 782 aaKnown RBP2.25□□□□□ -2.05
CFT2YLR115W NSE5Q03718 556 aa2.25□□□□□ -2.05
CFT2YLR115W ACO1P19414 778 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
CFT2YLR115W MRS6P32864 603 aaKnown RBP2.24□□□□□ -2.05
CFT2YLR115W PRM2P40534 656 aa2.24□□□□□ -2.05
CFT2YLR115W HLJ1P48353 224 aa2.24□□□□□ -2.05
CFT2YLR115W YGR054WP53235 642 aaKnown RBP2.24□□□□□ -2.05
CFT2YLR115W FOL1P53848 824 aa2.24□□□□□ -2.05
CFT2YLR115W MDM1Q01846 1127 aa2.24□□□□□ -2.05
CFT2YLR115W SPC19Q03954 165 aa2.24□□□□□ -2.05
CFT2YLR115W HLR1Q04429 423 aa2.24□□□□□ -2.05
CFT2YLR115W ARR3Q06598 404 aa2.24□□□□□ -2.05
CFT2YLR115W SLK19Q08581 821 aaKnown RBP2.24□□□□□ -2.05
CFT2YLR115W ICT1Q12385 394 aa2.24□□□□□ -2.05
CFT2YLR115W TOR1P35169 2470 aa2.24□□□□□ -2.05
CFT2YLR115W ARO1P08566 1588 aaKnown RBP2.24□□□□□ -2.05
CFT2YLR115W PGK1P00560 416 aaKnown RBP2.24□□□□□ -2.05
CFT2YLR115W PMA2P19657 947 aa2.24□□□□□ -2.05
CFT2YLR115W GFD2P25370 566 aaKnown RBP2.24□□□□□ -2.05
CFT2YLR115W AAD3P25612 363 aa2.24□□□□□ -2.05
CFT2YLR115W EBP2P36049 427 aaKnown RBP2.24□□□□□ -2.05
CFT2YLR115W MNN11P46985 422 aaKnown RBP2.24□□□□□ -2.05
CFT2YLR115W UME1Q03010 460 aa2.24□□□□□ -2.05
CFT2YLR115W TRS23Q03784 219 aa2.24□□□□□ -2.05
CFT2YLR115W PPN1Q04119 674 aa2.24□□□□□ -2.05
CFT2YLR115W YTM1Q12024 460 aaPredicted RBP2.24□□□□□ -2.05
CFT2YLR115W SLX4Q12098 748 aa2.24□□□□□ -2.05
CFT2YLR115W PDR10P51533 1564 aa2.24□□□□□ -2.05
CFT2YLR115W NUP145P49687 1317 aa2.23□□□□□ -2.05
CFT2YLR115W USO1P25386 1790 aa2.23□□□□□ -2.05
CFT2YLR115W CNE1P27825 502 aa2.23□□□□□ -2.05
CFT2YLR115W EHT1P38295 451 aa2.23□□□□□ -2.05
CFT2YLR115W VID28P40547 921 aa2.23□□□□□ -2.05
CFT2YLR115W YIP4P53093 235 aa2.23□□□□□ -2.05
CFT2YLR115W CPR8P53728 308 aa2.23□□□□□ -2.05
CFT2YLR115W DAK1P54838 584 aaKnown RBP2.23□□□□□ -2.05
CFT2YLR115W AI5_ALPHAQ9ZZX1 630 aa2.23□□□□□ -2.05
CFT2YLR115W RPO21P04050 1733 aaKnown RBP2.23□□□□□ -2.05
CFT2YLR115W CHC1P22137 1653 aaKnown RBP2.23□□□□□ -2.05
CFT2YLR115W HOP1P20050 605 aa2.23□□□□□ -2.05
CFT2YLR115W APN1P22936 367 aa2.23□□□□□ -2.05
CFT2YLR115W CDC60P26637 1090 aaKnown RBP2.23□□□□□ -2.05
CFT2YLR115W YPT10P38146 199 aa2.23□□□□□ -2.05
CFT2YLR115W PPE1P38796 400 aa2.23□□□□□ -2.05
CFT2YLR115W DUN1P39009 513 aa2.23□□□□□ -2.05
CFT2YLR115W BFA1P47113 574 aa2.23□□□□□ -2.05
CFT2YLR115W PMT3P47190 753 aa2.23□□□□□ -2.05
CFT2YLR115W USA1Q03714 838 aa2.23□□□□□ -2.05
CFT2YLR115W GDB1Q06625 1536 aa2.23□□□□□ -2.05
CFT2YLR115W TY1B-NL2Q99337 1749 aaKnown RBP2.23□□□□□ -2.05
CFT2YLR115W SER1P33330 395 aaKnown RBP2.22□□□□□ -2.05
CFT2YLR115W PTH2P34222 208 aa2.22□□□□□ -2.05
CFT2YLR115W HOT13P36078 116 aa2.22□□□□□ -2.05
CFT2YLR115W TAN1P53072 289 aaPredicted RBP2.22□□□□□ -2.05
CFT2YLR115W BUD17P53727 317 aa2.22□□□□□ -2.05
CFT2YLR115W YHM2Q04013 314 aa2.22□□□□□ -2.05
CFT2YLR115W SXM1Q04175 944 aaKnown RBP2.22□□□□□ -2.05
CFT2YLR115W FRE7Q12333 620 aa2.22□□□□□ -2.05
CFT2YLR115W SPT7P35177 1332 aa2.22□□□□□ -2.05
CFT2YLR115W ATP12P22135 325 aa2.22□□□□□ -2.05
CFT2YLR115W SSH4P32343 579 aa2.22□□□□□ -2.05
CFT2YLR115W TMT1P32643 299 aa2.22□□□□□ -2.05
CFT2YLR115W DID4P36108 232 aa2.22□□□□□ -2.05
CFT2YLR115W LRO1P40345 661 aa2.22□□□□□ -2.05
CFT2YLR115W YGR021WP53212 290 aa2.22□□□□□ -2.05
CFT2YLR115W PSK2Q08217 1101 aa2.22□□□□□ -2.05
CFT2YLR115W ZPS1Q12512 249 aa2.22□□□□□ -2.05
CFT2YLR115W TY2B-BQ12491 1770 aa2.22□□□□□ -2.05
CFT2YLR115W CPA2P03965 1118 aaKnown RBP2.21□□□□□ -2.06
CFT2YLR115W RPL7AP05737 244 aaKnown RBP2.21□□□□□ -2.06
CFT2YLR115W NUP1P20676 1076 aa2.21□□□□□ -2.06
CFT2YLR115W DAL3P32459 195 aa2.21□□□□□ -2.06
CFT2YLR115W VID27P40157 782 aa2.21□□□□□ -2.06
CFT2YLR115W LTP1P40347 161 aa2.21□□□□□ -2.06
CFT2YLR115W CWC22P53333 577 aaKnown RBP2.21□□□□□ -2.06
CFT2YLR115W TLG1Q03322 224 aa2.21□□□□□ -2.06
CFT2YLR115W TSR2Q06672 205 aaKnown RBP2.21□□□□□ -2.06
CFT2YLR115W YCG1Q06680 1035 aa2.21□□□□□ -2.06
CFT2YLR115W YAP7Q08182 245 aa2.21□□□□□ -2.06
CFT2YLR115W RPL7BQ12213 244 aaKnown RBP2.21□□□□□ -2.06
CFT2YLR115W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
CFT2YLR115W SAS3P34218 831 aa2.21□□□□□ -2.06
CFT2YLR115W PXA2P34230 853 aa2.21□□□□□ -2.06
CFT2YLR115W PEX5P35056 612 aa2.21□□□□□ -2.06
CFT2YLR115W MUM2P38236 366 aa2.21□□□□□ -2.06
CFT2YLR115W THI6P41835 540 aa2.21□□□□□ -2.06
CFT2YLR115W YGR237CP50089 785 aa2.21□□□□□ -2.06
CFT2YLR115W PEX8P53248 589 aa2.21□□□□□ -2.06
CFT2YLR115W ERO1Q03103 563 aa2.21□□□□□ -2.06
CFT2YLR115W ATP4P05626 244 aa2.2□□□□□ -2.06
CFT2YLR115W HMG2P12684 1045 aa2.2□□□□□ -2.06
CFT2YLR115W HXT4P32467 576 aa2.2□□□□□ -2.06
CFT2YLR115W RMA1P36001 430 aaKnown RBP2.2□□□□□ -2.06
CFT2YLR115W YHR033WP38690 423 aa2.2□□□□□ -2.06
CFT2YLR115W EXO1P39875 702 aa2.2□□□□□ -2.06
CFT2YLR115W YEL025CP39991 1188 aa2.2□□□□□ -2.06
CFT2YLR115W XBP1P40489 647 aa2.2□□□□□ -2.06
CFT2YLR115W COQ6P53318 479 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms