RNA–Protein interactions for RNA: YKR004C

ECM9, Transcript of Non-essential protein of unknown function, yeast

Gene ECM9, Length 1,134 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM9	YKR004C	RMA1	P36001	430 aa	Known RBP	4.6	□□□□□ -1.67
ECM9	YKR004C	YEL076C	P39971	216 aa		4.6	□□□□□ -1.67
ECM9	YKR004C	LYS20	P48570	428 aa	Known RBP	4.6	□□□□□ -1.67
ECM9	YKR004C	PTA1	Q01329	785 aa	Predicted RBP	4.6	□□□□□ -1.67
ECM9	YKR004C	SNA4	Q07549	140 aa		4.6	□□□□□ -1.67
ECM9	YKR004C	CRT10	Q08226	957 aa		4.6	□□□□□ -1.67
ECM9	YKR004C	DSS4	P32601	143 aa		4.59	□□□□□ -1.67
ECM9	YKR004C	TYS1	P36421	394 aa	Known RBP	4.59	□□□□□ -1.67
ECM9	YKR004C	MTQ2	Q03920	221 aa	Predicted RBP	4.59	□□□□□ -1.67
ECM9	YKR004C	PNO1	Q99216	274 aa	Known RBP	4.59	□□□□□ -1.67
ECM9	YKR004C	BET2	P20133	325 aa		4.58	□□□□□ -1.68
ECM9	YKR004C	AIM17	P23180	465 aa	Known RBP	4.58	□□□□□ -1.68
ECM9	YKR004C	RRP14	P36080	434 aa	Known RBP	4.58	□□□□□ -1.68
ECM9	YKR004C	YNL092W	P53934	400 aa		4.58	□□□□□ -1.68
ECM9	YKR004C	RAD33	Q04231	177 aa		4.58	□□□□□ -1.68
ECM9	YKR004C	YOR111W	Q99210	232 aa		4.58	□□□□□ -1.68
ECM9	YKR004C	CET1	O13297	549 aa	Predicted RBP	4.57	□□□□□ -1.68
ECM9	YKR004C	PCK1	P10963	549 aa		4.57	□□□□□ -1.68
ECM9	YKR004C	DGR2	P32330	852 aa		4.57	□□□□□ -1.68
ECM9	YKR004C	CDC5	P32562	705 aa		4.57	□□□□□ -1.68
ECM9	YKR004C	SQS1	P53866	767 aa	Known RBP	4.57	□□□□□ -1.68
ECM9	YKR004C	NDD1	Q08887	554 aa		4.57	□□□□□ -1.68
ECM9	YKR004C	GDA1	P32621	518 aa		4.56	□□□□□ -1.68
ECM9	YKR004C	DID4	P36108	232 aa		4.56	□□□□□ -1.68
ECM9	YKR004C	FTH1	P38310	465 aa		4.56	□□□□□ -1.68
ECM9	YKR004C	MNN11	P46985	422 aa	Known RBP	4.56	□□□□□ -1.68
ECM9	YKR004C	MDV1	P47025	714 aa		4.56	□□□□□ -1.68
ECM9	YKR004C	SNU56	Q03782	492 aa	Known RBP	4.56	□□□□□ -1.68
ECM9	YKR004C	THI73	Q07904	523 aa		4.56	□□□□□ -1.68
ECM9	YKR004C	YTM1	Q12024	460 aa	Predicted RBP	4.56	□□□□□ -1.68
ECM9	YKR004C	MAK32	P23060	363 aa		4.55	□□□□□ -1.68
ECM9	YKR004C	HXT4	P32467	576 aa		4.55	□□□□□ -1.68
ECM9	YKR004C	IMD2	P38697	523 aa	Known RBP	4.55	□□□□□ -1.68
ECM9	YKR004C	YIR016W	P40572	265 aa		4.55	□□□□□ -1.68
ECM9	YKR004C	HLJ1	P48353	224 aa		4.55	□□□□□ -1.68
ECM9	YKR004C	IMD3	P50095	523 aa	Known RBP	4.55	□□□□□ -1.68
ECM9	YKR004C	PEF1	P53238	335 aa		4.55	□□□□□ -1.68
ECM9	YKR004C	ALG12	P53730	551 aa		4.55	□□□□□ -1.68
ECM9	YKR004C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	RIP-Chip
ECM9	YKR004C	ADR1	P07248	1323 aa		4.54	□□□□□ -1.68
ECM9	YKR004C	SEC12	P11655	471 aa		4.54	□□□□□ -1.68
ECM9	YKR004C	RPT3	P33298	428 aa	Known RBP	4.54	□□□□□ -1.68
ECM9	YKR004C	MTD1	Q02046	320 aa	Known RBP	4.54	□□□□□ -1.68
ECM9	YKR004C	FPR4	Q06205	392 aa	Predicted RBP	4.54	□□□□□ -1.68
ECM9	YKR004C	GND1	P38720	489 aa	Known RBP	4.53	□□□□□ -1.68
ECM9	YKR004C	CIN1	P40987	1014 aa		4.53	□□□□□ -1.68
ECM9	YKR004C	YNL058C	P53947	316 aa		4.53	□□□□□ -1.68
ECM9	YKR004C	DNM1	P54861	757 aa		4.53	□□□□□ -1.68
ECM9	YKR004C	SDH8	P38345	138 aa		4.52	□□□□□ -1.69
ECM9	YKR004C	YIL152W	P40455	235 aa		4.52	□□□□□ -1.69
ECM9	YKR004C	CIR1	P42940	261 aa		4.52	□□□□□ -1.69
ECM9	YKR004C	BOP3	P53958	396 aa		4.52	□□□□□ -1.69
ECM9	YKR004C	ATX2	Q12067	313 aa		4.52	□□□□□ -1.69
ECM9	YKR004C	YTA7	P40340	1379 aa		4.52	□□□□□ -1.69
ECM9	YKR004C	GAL4	P04386	881 aa		4.51	□□□□□ -1.69
ECM9	YKR004C	AEP2	P22136	580 aa		4.51	□□□□□ -1.69
ECM9	YKR004C	MTG2	P38860	518 aa		4.51	□□□□□ -1.69
ECM9	YKR004C	NGL1	Q08213	363 aa	Known RBP	4.51	□□□□□ -1.69
ECM9	YKR004C	UBX3	Q12229	455 aa		4.51	□□□□□ -1.69
ECM9	YKR004C	ILS1	P09436	1072 aa	Known RBP	4.5	□□□□□ -1.69
ECM9	YKR004C	CBP3	P21560	335 aa		4.5	□□□□□ -1.69
ECM9	YKR004C	MNN1	P39106	762 aa		4.5	□□□□□ -1.69
ECM9	YKR004C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
ECM9	YKR004C	PPG1	P32838	368 aa		4.49	□□□□□ -1.69
ECM9	YKR004C	COG2	P53271	262 aa		4.49	□□□□□ -1.69
ECM9	YKR004C	VTC3	Q02725	835 aa		4.49	□□□□□ -1.69
ECM9	YKR004C	YTH1	Q06102	208 aa	Predicted RBP	4.49	□□□□□ -1.69
ECM9	YKR004C	DSE3	Q08729	430 aa		4.49	□□□□□ -1.69
ECM9	YKR004C	GET3	Q12154	354 aa	Known RBP	4.49	□□□□□ -1.69
ECM9	YKR004C	Q0010	Q9ZZX9	128 aa		4.49	□□□□□ -1.69
ECM9	YKR004C	CHO2	P05374	869 aa	Known RBP	4.48	□□□□□ -1.69
ECM9	YKR004C	ATP12	P22135	325 aa		4.48	□□□□□ -1.69
ECM9	YKR004C	RRP43	P25359	394 aa	Predicted RBP	4.48	□□□□□ -1.69
ECM9	YKR004C	YCR043C	P25361	127 aa		4.48	□□□□□ -1.69
ECM9	YKR004C	TOM71	P38825	639 aa	Known RBP	4.48	□□□□□ -1.69
ECM9	YKR004C	LAS21	P40367	830 aa		4.48	□□□□□ -1.69
ECM9	YKR004C	RNR4	P49723	345 aa	Known RBP	4.48	□□□□□ -1.69
ECM9	YKR004C	UME1	Q03010	460 aa		4.48	□□□□□ -1.69
ECM9	YKR004C	YML119W	Q03208	357 aa		4.48	□□□□□ -1.69
ECM9	YKR004C	RTC1	Q08281	1341 aa		4.47	□□□□□ -1.69
ECM9	YKR004C	AMD2	P22580	549 aa		4.47	□□□□□ -1.69
ECM9	YKR004C	CWH43	P25618	953 aa		4.47	□□□□□ -1.69
ECM9	YKR004C	RRP8	P38961	392 aa	Known RBP	4.47	□□□□□ -1.69
ECM9	YKR004C	MDR1	P53258	950 aa		4.47	□□□□□ -1.69
ECM9	YKR004C	RNH70	P53331	553 aa		4.47	□□□□□ -1.69
ECM9	YKR004C	RAD34	Q06665	692 aa		4.47	□□□□□ -1.69
ECM9	YKR004C	GRS2	Q06817	618 aa		4.47	□□□□□ -1.69
ECM9	YKR004C	VPS5	Q92331	675 aa		4.47	□□□□□ -1.69
ECM9	YKR004C	NOP1	P15646	327 aa	Known RBP	4.46	□□□□□ -1.7
ECM9	YKR004C	PLC1	P32383	869 aa		4.46	□□□□□ -1.7
ECM9	YKR004C	KES1	P35844	434 aa	Known RBP	4.46	□□□□□ -1.7
ECM9	YKR004C	SRP68	P38687	599 aa	Known RBP	4.46	□□□□□ -1.7
ECM9	YKR004C	MAM1	P40065	302 aa		4.46	□□□□□ -1.7
ECM9	YKR004C	TES1	P41903	349 aa	Known RBP	4.46	□□□□□ -1.7
ECM9	YKR004C	PMT3	P47190	753 aa		4.46	□□□□□ -1.7
ECM9	YKR004C	YOR389W	Q08912	624 aa		4.46	□□□□□ -1.7
ECM9	YKR004C	PFA4	Q12006	378 aa		4.46	□□□□□ -1.7
ECM9	YKR004C	LYS21	Q12122	440 aa	Known RBP	4.46	□□□□□ -1.7
ECM9	YKR004C	LCB4	Q12246	624 aa		4.46	□□□□□ -1.7
ECM9	YKR004C	SER1	P33330	395 aa	Known RBP	4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms