RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W ERG20P08524 352 aaKnown RBP4□□□□□ -1.77
UBP12YJL197W SEC21P32074 935 aaKnown RBP4□□□□□ -1.77
UBP12YJL197W SWH1P35845 1188 aa4□□□□□ -1.77
UBP12YJL197W RMA1P36001 430 aaKnown RBP4□□□□□ -1.77
UBP12YJL197W APT2P36973 181 aa4□□□□□ -1.77
UBP12YJL197W MDR1P53258 950 aa4□□□□□ -1.77
UBP12YJL197W JJJ1P53863 590 aa4□□□□□ -1.77
UBP12YJL197W CIR2Q08822 631 aa4□□□□□ -1.77
UBP12YJL197W NUS1Q12063 375 aa4□□□□□ -1.77
UBP12YJL197W GPI10P30777 616 aa4□□□□□ -1.77
UBP12YJL197W TDP1P38319 544 aa4□□□□□ -1.77
UBP12YJL197W PZF1P39933 429 aa4□□□□□ -1.77
UBP12YJL197W FMP10P40098 244 aa4□□□□□ -1.77
UBP12YJL197W MET18P40469 1032 aa4□□□□□ -1.77
UBP12YJL197W TRS31Q03337 283 aa4□□□□□ -1.77
UBP12YJL197W PRP42Q03776 544 aaKnown RBP4□□□□□ -1.77
UBP12YJL197W GET3Q12154 354 aaKnown RBP4□□□□□ -1.77
UBP12YJL197W TY2A-LR1P0C2J4 438 aa4□□□□□ -1.77
UBP12YJL197W TY2A-FP0CX61 438 aa4□□□□□ -1.77
UBP12YJL197W TY2A-GR2P0CX62 438 aa4□□□□□ -1.77
UBP12YJL197W TRX1P22217 103 aaKnown RBP4□□□□□ -1.77
UBP12YJL197W CLB3P24870 427 aa4□□□□□ -1.77
UBP12YJL197W TY2A-CP25383 438 aa4□□□□□ -1.77
UBP12YJL197W RSC6P25632 483 aa4□□□□□ -1.77
UBP12YJL197W PRE4P30657 266 aa4□□□□□ -1.77
UBP12YJL197W SWC3P31376 625 aa4□□□□□ -1.77
UBP12YJL197W SFA1P32771 386 aa4□□□□□ -1.77
UBP12YJL197W MPT5P39016 859 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
UBP12YJL197W COG1P53079 417 aa4□□□□□ -1.77
UBP12YJL197W EOS1P53938 366 aa4□□□□□ -1.77
UBP12YJL197W TY2A-DR2Q03483 438 aa4□□□□□ -1.77
UBP12YJL197W CUE5Q08412 411 aaKnown RBP4□□□□□ -1.77
UBP12YJL197W TY2A-BQ12260 438 aa4□□□□□ -1.77
UBP12YJL197W TY2A-OR2Q12293 438 aa4□□□□□ -1.77
UBP12YJL197W TY2A-DR1Q12392 438 aa4□□□□□ -1.77
UBP12YJL197W TY2A-OR1Q12439 438 aa4□□□□□ -1.77
UBP12YJL197W TY2A-DR3Q99303 438 aa4□□□□□ -1.77
UBP12YJL197W SUI3P09064 285 aaKnown RBP3.99□□□□□ -1.77
UBP12YJL197W REC107P21651 314 aa3.99□□□□□ -1.77
UBP12YJL197W SPB1P25582 841 aaPredicted RBP3.99□□□□□ -1.77
UBP12YJL197W APL1P27351 700 aa3.99□□□□□ -1.77
UBP12YJL197W VFA1P40080 203 aa3.99□□□□□ -1.77
UBP12YJL197W YJL055WP47044 245 aa3.99□□□□□ -1.77
UBP12YJL197W YNL058CP53947 316 aa3.99□□□□□ -1.77
UBP12YJL197W ESC8Q08119 714 aa3.99□□□□□ -1.77
UBP12YJL197W SGO1Q08490 590 aa3.99□□□□□ -1.77
UBP12YJL197W RPP2AP05319 106 aaKnown RBP3.99□□□□□ -1.77
UBP12YJL197W PET122P10355 254 aa3.99□□□□□ -1.77
UBP12YJL197W CBS1P14066 229 aa3.99□□□□□ -1.77
UBP12YJL197W SIC1P38634 284 aa3.99□□□□□ -1.77
UBP12YJL197W YHR218WP38899 603 aa3.99□□□□□ -1.77
UBP12YJL197W MET28P40573 187 aa3.99□□□□□ -1.77
UBP12YJL197W BIT61P47041 543 aa3.99□□□□□ -1.77
UBP12YJL197W ASE1P50275 885 aa3.99□□□□□ -1.77
UBP12YJL197W DSD1P53095 428 aa3.99□□□□□ -1.77
UBP12YJL197W SGF73P53165 657 aa3.99□□□□□ -1.77
UBP12YJL197W ASI2P53895 289 aa3.99□□□□□ -1.77
UBP12YJL197W CLU1Q03690 1277 aaKnown RBP3.99□□□□□ -1.77
UBP12YJL197W AIM6Q07716 390 aa3.99□□□□□ -1.77
UBP12YJL197W YCK1P23291 538 aa3.99□□□□□ -1.77
UBP12YJL197W FTH1P38310 465 aa3.99□□□□□ -1.77
UBP12YJL197W SAK1P38990 1142 aa3.99□□□□□ -1.77
UBP12YJL197W RGI2P40188 164 aa3.99□□□□□ -1.77
UBP12YJL197W ERB1Q04660 807 aaKnown RBP3.99□□□□□ -1.77
UBP12YJL197W KIN82P25341 720 aa3.98□□□□□ -1.77
UBP12YJL197W PEP3P27801 918 aa3.98□□□□□ -1.77
UBP12YJL197W PGM1P33401 570 aaKnown RBP3.98□□□□□ -1.77
UBP12YJL197W YBR259WP38338 688 aa3.98□□□□□ -1.77
UBP12YJL197W RRM3P38766 723 aa3.98□□□□□ -1.77
UBP12YJL197W SMF1P38925 575 aa3.98□□□□□ -1.77
UBP12YJL197W MAM1P40065 302 aa3.98□□□□□ -1.77
UBP12YJL197W PFA3P42836 336 aa3.98□□□□□ -1.77
UBP12YJL197W FYV8P46949 817 aaKnown RBP3.98□□□□□ -1.77
UBP12YJL197W PRP31P49704 494 aaPredicted RBP3.98□□□□□ -1.77
UBP12YJL197W NCS2P53923 493 aaPredicted RBP3.98□□□□□ -1.77
UBP12YJL197W YPL108WQ02872 168 aaPredicted RBP3.98□□□□□ -1.77
UBP12YJL197W ENT4Q07872 247 aa3.98□□□□□ -1.77
UBP12YJL197W PHM7Q12252 991 aa3.98□□□□□ -1.77
UBP12YJL197W RIB2Q12362 591 aaKnown RBP3.98□□□□□ -1.77
UBP12YJL197W SPE1P08432 466 aa3.98□□□□□ -1.77
UBP12YJL197W KES1P35844 434 aaKnown RBP3.98□□□□□ -1.77
UBP12YJL197W UBP11P36026 717 aa3.98□□□□□ -1.77
UBP12YJL197W SSU1P41930 458 aa3.98□□□□□ -1.77
UBP12YJL197W YGR066CP53242 292 aa3.98□□□□□ -1.77
UBP12YJL197W REG1Q00816 1014 aa3.98□□□□□ -1.77
UBP12YJL197W HOT1Q03213 719 aa3.98□□□□□ -1.77
UBP12YJL197W MUS81Q04149 632 aaPredicted RBP3.98□□□□□ -1.77
UBP12YJL197W AIM32Q04689 311 aa3.98□□□□□ -1.77
UBP12YJL197W AIM41Q12032 185 aa3.98□□□□□ -1.77
UBP12YJL197W REX3Q12090 404 aa3.98□□□□□ -1.77
UBP12YJL197W SUL2Q12325 893 aa3.98□□□□□ -1.77
UBP12YJL197W DFR1P07807 211 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
UBP12YJL197W MDH1P17505 334 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
UBP12YJL197W ADE2P21264 571 aaKnown RBP3.98□□□□□ -1.77
UBP12YJL197W CLB1P24868 471 aa3.98□□□□□ -1.77
UBP12YJL197W GCS1P35197 352 aa3.98□□□□□ -1.77
UBP12YJL197W LYS9P38999 446 aa3.98□□□□□ -1.77
UBP12YJL197W YIR007WP40566 764 aa3.98□□□□□ -1.77
UBP12YJL197W THI6P41835 540 aa3.98□□□□□ -1.77
UBP12YJL197W ART5P53244 586 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms