RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W LAA1P39526 2014 aa5.9□□□□□ -1.47
VMA16YHR026W TUF1P02992 437 aaKnown RBP5.89□□□□□ -1.47
VMA16YHR026W DBP5P20449 482 aaKnown RBP5.89□□□□□ -1.47
VMA16YHR026W SIR1P21691 654 aa5.89□□□□□ -1.47
VMA16YHR026W PUF4P25339 888 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
VMA16YHR026W LYP1P32487 611 aa5.89□□□□□ -1.47
VMA16YHR026W PCH2P38126 564 aa5.89□□□□□ -1.47
VMA16YHR026W YBR284WP38150 797 aa5.89□□□□□ -1.47
VMA16YHR026W MIP6P38760 659 aaKnown RBP5.89□□□□□ -1.47
VMA16YHR026W OSW7P43611 510 aa5.89□□□□□ -1.47
VMA16YHR026W CCM1P48237 864 aaPredicted RBP5.89□□□□□ -1.47
VMA16YHR026W APT1P49435 187 aaKnown RBP5.89□□□□□ -1.47
VMA16YHR026W PSP1P50896 841 aaKnown RBP5.89□□□□□ -1.47
VMA16YHR026W YGR053CP53234 283 aa5.89□□□□□ -1.47
VMA16YHR026W MAL13P53338 473 aa5.89□□□□□ -1.47
VMA16YHR026W CBK1P53894 756 aa5.89□□□□□ -1.47
VMA16YHR026W NCS2P53923 493 aaPredicted RBP5.89□□□□□ -1.47
VMA16YHR026W SDH1Q00711 640 aa5.89□□□□□ -1.47
VMA16YHR026W TMN2Q04562 672 aa5.89□□□□□ -1.47
VMA16YHR026W YLR287CQ05881 355 aa5.89□□□□□ -1.47
VMA16YHR026W MED7Q08278 222 aa5.89□□□□□ -1.47
VMA16YHR026W NEW1Q08972 1196 aaKnown RBP5.89□□□□□ -1.47
VMA16YHR026W CDC53Q12018 815 aaKnown RBP5.89□□□□□ -1.47
VMA16YHR026W FAL1Q12099 399 aaKnown RBP5.89□□□□□ -1.47
VMA16YHR026W ATG9Q12142 997 aa5.89□□□□□ -1.47
VMA16YHR026W SPO21Q12411 609 aa5.89□□□□□ -1.47
VMA16YHR026W SMC6Q12749 1114 aa5.89□□□□□ -1.47
VMA16YHR026W APM4Q99186 491 aa5.89□□□□□ -1.47
VMA16YHR026W INO1P11986 533 aa5.88□□□□□ -1.47
VMA16YHR026W OM45P16547 393 aa5.88□□□□□ -1.47
VMA16YHR026W PET123P17558 318 aa5.88□□□□□ -1.47
VMA16YHR026W ISY1P21374 235 aaPredicted RBP5.88□□□□□ -1.47
VMA16YHR026W DPB3P27344 201 aa5.88□□□□□ -1.47
VMA16YHR026W SEC65P29478 273 aa5.88□□□□□ -1.47
VMA16YHR026W PET10P36139 283 aa5.88□□□□□ -1.47
VMA16YHR026W UBP5P39944 805 aa5.88□□□□□ -1.47
VMA16YHR026W NDC80P40460 691 aa5.88□□□□□ -1.47
VMA16YHR026W TAF1P46677 1066 aa5.88□□□□□ -1.47
VMA16YHR026W CUL3P53202 744 aa5.88□□□□□ -1.47
VMA16YHR026W PGA2P53903 129 aa5.88□□□□□ -1.47
VMA16YHR026W ERG5P54781 538 aa5.88□□□□□ -1.47
VMA16YHR026W SEC5P89102 971 aa5.88□□□□□ -1.47
VMA16YHR026W CWC21Q03375 135 aaKnown RBP5.88□□□□□ -1.47
VMA16YHR026W TLG2Q08144 397 aa5.88□□□□□ -1.47
VMA16YHR026W HRK1Q08732 759 aaKnown RBP5.88□□□□□ -1.47
VMA16YHR026W LEA1Q08963 238 aaPredicted RBP5.88□□□□□ -1.47
VMA16YHR026W QCR6P00127 147 aa5.87□□□□□ -1.47
VMA16YHR026W PSO2P30620 661 aa5.87□□□□□ -1.47
VMA16YHR026W ABD1P32783 436 aaPredicted RBP5.87□□□□□ -1.47
VMA16YHR026W PDR3P33200 976 aa5.87□□□□□ -1.47
VMA16YHR026W STO1P34160 861 aaKnown RBP5.87□□□□□ -1.47
VMA16YHR026W YKL069WP36088 180 aa5.87□□□□□ -1.47
VMA16YHR026W ERC1P38767 581 aa5.87□□□□□ -1.47
VMA16YHR026W RTT107P38850 1070 aa5.87□□□□□ -1.47
VMA16YHR026W VFA1P40080 203 aa5.87□□□□□ -1.47
VMA16YHR026W NUP82P40368 713 aa5.87□□□□□ -1.47
VMA16YHR026W CAF130P53280 1122 aaPredicted RBP5.87□□□□□ -1.47
VMA16YHR026W TRS130Q03660 1102 aa5.87□□□□□ -1.47
VMA16YHR026W SML1Q04964 104 aa5.87□□□□□ -1.47
VMA16YHR026W YLH47Q06493 454 aa5.87□□□□□ -1.47
VMA16YHR026W YAP7Q08182 245 aa5.87□□□□□ -1.47
VMA16YHR026W RRP6Q12149 733 aaKnown RBP5.87□□□□□ -1.47
VMA16YHR026W NOP14Q99207 810 aaKnown RBP5.87□□□□□ -1.47
VMA16YHR026W GAL80P04387 435 aa5.86□□□□□ -1.47
VMA16YHR026W YER152CP10356 443 aa5.86□□□□□ -1.47
VMA16YHR026W RRP43P25359 394 aaPredicted RBP5.86□□□□□ -1.47
VMA16YHR026W RPC53P25441 422 aa5.86□□□□□ -1.47
VMA16YHR026W PRR1P28708 518 aa5.86□□□□□ -1.47
VMA16YHR026W GPI10P30777 616 aa5.86□□□□□ -1.47
VMA16YHR026W SRB4P32569 687 aa5.86□□□□□ -1.47
VMA16YHR026W CSE1P33307 960 aa5.86□□□□□ -1.47
VMA16YHR026W YKL091CP33324 310 aaKnown RBP5.86□□□□□ -1.47
VMA16YHR026W OMA1P36163 345 aa5.86□□□□□ -1.47
VMA16YHR026W SMC2P38989 1170 aaKnown RBP5.86□□□□□ -1.47
VMA16YHR026W PCF11P39081 626 aaPredicted RBP5.86□□□□□ -1.47
VMA16YHR026W CIN4P39110 191 aa5.86□□□□□ -1.47
VMA16YHR026W GIP4P39732 760 aa5.86□□□□□ -1.47
VMA16YHR026W SHQ1P40486 507 aaPredicted RBP5.86□□□□□ -1.47
VMA16YHR026W MPH1P40562 993 aa5.86□□□□□ -1.47
VMA16YHR026W CHS6P40955 746 aa5.86□□□□□ -1.47
VMA16YHR026W YFL054CP43549 646 aa5.86□□□□□ -1.47
VMA16YHR026W POL31P46957 487 aa5.86□□□□□ -1.47
VMA16YHR026W SMC3P47037 1230 aa5.86□□□□□ -1.47
VMA16YHR026W HFM1P51979 1187 aa5.86□□□□□ -1.47
VMA16YHR026W FUS2Q05670 677 aa5.86□□□□□ -1.47
VMA16YHR026W YOR059CQ08448 450 aaKnown RBP5.86□□□□□ -1.47
VMA16YHR026W TRE1Q08919 783 aa5.86□□□□□ -1.47
VMA16YHR026W NSI1Q12457 570 aa5.86□□□□□ -1.47
VMA16YHR026W YEL076C-AP0CX16 216 aa5.85□□□□□ -1.47
VMA16YHR026W YLR464WP0CX17 216 aa5.85□□□□□ -1.47
VMA16YHR026W MTF2P10849 440 aa5.85□□□□□ -1.47
VMA16YHR026W VPS3P23643 1011 aa5.85□□□□□ -1.47
VMA16YHR026W APL1P27351 700 aa5.85□□□□□ -1.47
VMA16YHR026W PRO1P32264 428 aa5.85□□□□□ -1.47
VMA16YHR026W YSC84P32793 468 aa5.85□□□□□ -1.47
VMA16YHR026W TCD2P36101 447 aaKnown RBP5.85□□□□□ -1.47
VMA16YHR026W SEA4P38164 1038 aa5.85□□□□□ -1.47
VMA16YHR026W MMS4P38257 691 aa5.85□□□□□ -1.47
VMA16YHR026W YHL012WP38709 493 aa5.85□□□□□ -1.47
VMA16YHR026W PTC7P38797 343 aa5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms