RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W GRX8Q05926 109 aa11.66□□□□□ -0.54
SNF6YHL025W IMA2Q08295 589 aa11.66□□□□□ -0.54
SNF6YHL025W YOR223WQ12015 292 aa11.66□□□□□ -0.54
SNF6YHL025W SVS1Q12254 260 aa11.66□□□□□ -0.54
SNF6YHL025W EFG1Q3E705 233 aaKnown RBP11.66□□□□□ -0.54
SNF6YHL025W MET16P18408 261 aaPredicted RBP11.65□□□□□ -0.54
SNF6YHL025W DAL1P32375 460 aa11.65□□□□□ -0.54
SNF6YHL025W SAE2P46946 345 aa11.65□□□□□ -0.54
SNF6YHL025W INA17Q02888 182 aa11.65□□□□□ -0.54
SNF6YHL025W ARA2Q04212 335 aa11.65□□□□□ -0.54
SNF6YHL025W SPE3Q12074 293 aaKnown RBP11.65□□□□□ -0.54
SNF6YHL025W LCB4Q12246 624 aa11.65□□□□□ -0.54
SNF6YHL025W MRPL25P23369 157 aa11.64□□□□□ -0.55
SNF6YHL025W COQ8P27697 501 aa11.64□□□□□ -0.55
SNF6YHL025W ECM13P38195 257 aa11.64□□□□□ -0.55
SNF6YHL025W STL1P39932 569 aa11.64□□□□□ -0.55
SNF6YHL025W BTT1P40314 149 aaPredicted RBP11.64□□□□□ -0.55
SNF6YHL025W YJL132WP47014 750 aa11.64□□□□□ -0.55
SNF6YHL025W YGR127WP53275 312 aa11.64□□□□□ -0.55
SNF6YHL025W YPR003CP53394 754 aa11.64□□□□□ -0.55
SNF6YHL025W NMA111P53920 997 aa11.64□□□□□ -0.55
SNF6YHL025W GCN5Q03330 439 aa11.64□□□□□ -0.55
SNF6YHL025W USA1Q03714 838 aa11.64□□□□□ -0.55
SNF6YHL025W NRT1Q08485 598 aa11.64□□□□□ -0.55
SNF6YHL025W PUF2Q12221 1075 aaKnown RBP RIP-Chip data11.64□□□□□ -0.55not detected
SNF6YHL025W AI5_ALPHAQ9ZZX1 630 aa11.64□□□□□ -0.55
SNF6YHL025W HIS1P00498 297 aaKnown RBP11.63□□□□□ -0.55
SNF6YHL025W KEX2P13134 814 aa11.63□□□□□ -0.55
SNF6YHL025W KAR4P25583 335 aa11.63□□□□□ -0.55
SNF6YHL025W MSH1P25846 959 aa11.63□□□□□ -0.55
SNF6YHL025W RAD16P31244 790 aa11.63□□□□□ -0.55
SNF6YHL025W FUI1P38196 639 aa11.63□□□□□ -0.55
SNF6YHL025W ALA1P40825 983 aaKnown RBP11.63□□□□□ -0.55
SNF6YHL025W MAF1P41910 395 aa11.63□□□□□ -0.55
SNF6YHL025W RTT101P47050 842 aa11.63□□□□□ -0.55
SNF6YHL025W MRX6P48564 524 aa11.63□□□□□ -0.55
SNF6YHL025W YNL144CP53907 740 aa11.63□□□□□ -0.55
SNF6YHL025W AAD15Q08361 143 aa11.63□□□□□ -0.55
SNF6YHL025W NDJ1Q12366 352 aa11.63□□□□□ -0.55
SNF6YHL025W TOR1P35169 2470 aa11.63□□□□□ -0.55
SNF6YHL025W URA7P28274 579 aaKnown RBP11.62□□□□□ -0.55
SNF6YHL025W OAF3P36023 863 aa11.62□□□□□ -0.55
SNF6YHL025W SAF1P38352 637 aa11.62□□□□□ -0.55
SNF6YHL025W OTU2P38747 307 aaKnown RBP11.62□□□□□ -0.55
SNF6YHL025W EDC3P39998 551 aaKnown RBP11.62□□□□□ -0.55
SNF6YHL025W IML2P47031 731 aa11.62□□□□□ -0.55
SNF6YHL025W ZIP2P53061 704 aa11.62□□□□□ -0.55
SNF6YHL025W UTP13Q05946 817 aaKnown RBP11.62□□□□□ -0.55
SNF6YHL025W YLR257WQ06146 321 aaKnown RBP11.62□□□□□ -0.55
SNF6YHL025W SGO1Q08490 590 aa11.62□□□□□ -0.55
SNF6YHL025W CBC2Q08920 208 aaKnown RBP RIP-Chip data11.62□□□□□ -0.55not detected
SNF6YHL025W SPE1P08432 466 aa11.61□□□□□ -0.55
SNF6YHL025W ILS1P09436 1072 aaKnown RBP11.61□□□□□ -0.55
SNF6YHL025W PDE1P22434 369 aa11.61□□□□□ -0.55
SNF6YHL025W TSR4P25040 408 aa11.61□□□□□ -0.55
SNF6YHL025W AIM26P32858 118 aa11.61□□□□□ -0.55
SNF6YHL025W PPE1P38796 400 aa11.61□□□□□ -0.55
SNF6YHL025W YEL028WP39989 153 aa11.61□□□□□ -0.55
SNF6YHL025W RPS10BP46784 105 aaKnown RBP11.61□□□□□ -0.55
SNF6YHL025W UTP8P53276 713 aaKnown RBP11.61□□□□□ -0.55
SNF6YHL025W RPS10AQ08745 105 aaPredicted RBP11.61□□□□□ -0.55
SNF6YHL025W ENO2P00925 437 aaKnown RBP11.6□□□□□ -0.55
SNF6YHL025W ILV2P07342 687 aaKnown RBP11.6□□□□□ -0.55
SNF6YHL025W IMG2P25642 146 aaPredicted RBP11.6□□□□□ -0.55
SNF6YHL025W NUP60P39705 539 aa11.6□□□□□ -0.55
SNF6YHL025W YAT2P40017 923 aa11.6□□□□□ -0.55
SNF6YHL025W MOB1P40484 314 aa11.6□□□□□ -0.55
SNF6YHL025W CNN1P43618 361 aa11.6□□□□□ -0.55
SNF6YHL025W TAH11P47112 604 aa11.6□□□□□ -0.55
SNF6YHL025W KTR5P53966 522 aaPredicted RBP11.6□□□□□ -0.55
SNF6YHL025W INP2Q03824 705 aa11.6□□□□□ -0.55
SNF6YHL025W IRC10Q08118 586 aa11.6□□□□□ -0.55
SNF6YHL025W MPC54Q08550 464 aa11.6□□□□□ -0.55
SNF6YHL025W HOS1Q12214 470 aa11.6□□□□□ -0.55
SNF6YHL025W RPB2P08518 1224 aaKnown RBP11.59□□□□□ -0.55
SNF6YHL025W MTF1P14908 341 aaKnown RBP11.59□□□□□ -0.55
SNF6YHL025W ADY2P25613 283 aa11.59□□□□□ -0.55
SNF6YHL025W CDC20P26309 610 aa11.59□□□□□ -0.55
SNF6YHL025W KES1P35844 434 aaKnown RBP11.59□□□□□ -0.55
SNF6YHL025W SFB3P38810 929 aa11.59□□□□□ -0.55
SNF6YHL025W ATM1P40416 690 aa11.59□□□□□ -0.55
SNF6YHL025W SNG1P46950 547 aa11.59□□□□□ -0.55
SNF6YHL025W PSP1P50896 841 aaKnown RBP11.59□□□□□ -0.55
SNF6YHL025W PIR3Q03180 325 aa11.59□□□□□ -0.55
SNF6YHL025W CUE5Q08412 411 aaKnown RBP11.59□□□□□ -0.55
SNF6YHL025W ERR1P0CX10 437 aa11.58□□□□□ -0.56
SNF6YHL025W ERR2P0CX11 437 aa11.58□□□□□ -0.56
SNF6YHL025W YCR051WP25631 222 aa11.58□□□□□ -0.56
SNF6YHL025W PTC3P34221 468 aaKnown RBP11.58□□□□□ -0.56
SNF6YHL025W KAP104P38217 918 aaKnown RBP11.58□□□□□ -0.56
SNF6YHL025W ERR3P42222 437 aa11.58□□□□□ -0.56
SNF6YHL025W EMW1P42842 904 aaKnown RBP11.58□□□□□ -0.56
SNF6YHL025W ENT5Q03769 411 aaKnown RBP11.58□□□□□ -0.56
SNF6YHL025W YMR160WQ03823 816 aa11.58□□□□□ -0.56
SNF6YHL025W ADE13Q05911 482 aaKnown RBP11.58□□□□□ -0.56
SNF6YHL025W LPX1Q12405 387 aaKnown RBP11.58□□□□□ -0.56
SNF6YHL025W CCH1P50077 2039 aa11.57□□□□□ -0.56
SNF6YHL025W HMG2P12684 1045 aa11.57□□□□□ -0.56
SNF6YHL025W APE1P14904 514 aa11.57□□□□□ -0.56
SNF6YHL025W BET2P20133 325 aa11.57□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms