RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W RTN2Q12443 393 aa7.07□□□□□ -1.28
SNU71YGR013W CAT8P39113 1433 aa7.07□□□□□ -1.28
SNU71YGR013W SUI3P09064 285 aaKnown RBP7.07□□□□□ -1.28
SNU71YGR013W FRS1P15624 595 aaKnown RBP7.07□□□□□ -1.28
SNU71YGR013W RFC5P38251 354 aa7.07□□□□□ -1.28
SNU71YGR013W FSH1P38777 243 aaKnown RBP7.07□□□□□ -1.28
SNU71YGR013W SAK1P38990 1142 aa7.07□□□□□ -1.28
SNU71YGR013W FMP10P40098 244 aa7.07□□□□□ -1.28
SNU71YGR013W CTF4Q01454 927 aa7.07□□□□□ -1.28
SNU71YGR013W YSA1Q01976 231 aa7.07□□□□□ -1.28
SNU71YGR013W YLR345WQ06137 509 aa7.07□□□□□ -1.28
SNU71YGR013W YPL191CQ08930 360 aa7.07□□□□□ -1.28
SNU71YGR013W TPK1P06244 397 aa7.06□□□□□ -1.28
SNU71YGR013W PCK1P10963 549 aa7.06□□□□□ -1.28
SNU71YGR013W PYC1P11154 1178 aaKnown RBP7.06□□□□□ -1.28
SNU71YGR013W CTF8P38877 133 aa7.06□□□□□ -1.28
SNU71YGR013W SPO22P40511 975 aa7.06□□□□□ -1.28
SNU71YGR013W HOS2P53096 452 aaPredicted RBP7.06□□□□□ -1.28
SNU71YGR013W GEA1P47102 1408 aaPredicted RBP7.06□□□□□ -1.28
SNU71YGR013W BIK1P11709 440 aa7.05□□□□□ -1.28
SNU71YGR013W APL1P27351 700 aa7.05□□□□□ -1.28
SNU71YGR013W YHR078WP38799 552 aa7.05□□□□□ -1.28
SNU71YGR013W CAB2P40506 365 aa7.05□□□□□ -1.28
SNU71YGR013W MRX6P48564 524 aa7.05□□□□□ -1.28
SNU71YGR013W RPT6Q01939 405 aaKnown RBP7.05□□□□□ -1.28
SNU71YGR013W MSC2Q03455 724 aa7.05□□□□□ -1.28
SNU71YGR013W HUA2Q12134 243 aa7.05□□□□□ -1.28
SNU71YGR013W SEC7P11075 2009 aaKnown RBP7.05□□□□□ -1.28
SNU71YGR013W PMS1P14242 873 aa7.04□□□□□ -1.28
SNU71YGR013W YPT7P32939 208 aa7.04□□□□□ -1.28
SNU71YGR013W YJL068CP40363 299 aa7.04□□□□□ -1.28
SNU71YGR013W YIL166CP40445 542 aa7.04□□□□□ -1.28
SNU71YGR013W UBP7P40453 1071 aa7.04□□□□□ -1.28
SNU71YGR013W FOL2P51601 243 aaKnown RBP7.04□□□□□ -1.28
SNU71YGR013W SQS1P53866 767 aaKnown RBP7.04□□□□□ -1.28
SNU71YGR013W VPS36Q06696 566 aa7.04□□□□□ -1.28
SNU71YGR013W ICL2Q12031 575 aa7.04□□□□□ -1.28
SNU71YGR013W TY3B-GQ99315 1547 aa7.04□□□□□ -1.28
SNU71YGR013W SES1P07284 462 aaKnown RBP7.04□□□□□ -1.28
SNU71YGR013W UTP9P38882 575 aaKnown RBP7.04□□□□□ -1.28
SNU71YGR013W PXA1P41909 870 aa7.04□□□□□ -1.28
SNU71YGR013W GSM1P42950 618 aa7.04□□□□□ -1.28
SNU71YGR013W ADY3Q07732 790 aa7.04□□□□□ -1.28
SNU71YGR013W YBR126W-AQ8TGU7 68 aa7.04□□□□□ -1.28
SNU71YGR013W YOR111WQ99210 232 aa7.04□□□□□ -1.28
SNU71YGR013W YOR093CQ12275 1648 aa7.04□□□□□ -1.28
SNU71YGR013W YSP2Q06681 1438 aa7.03□□□□□ -1.28
SNU71YGR013W SEC53P07283 254 aaKnown RBP7.03□□□□□ -1.28
SNU71YGR013W MRP20P32387 263 aa7.03□□□□□ -1.28
SNU71YGR013W SDP1P40479 209 aa7.03□□□□□ -1.28
SNU71YGR013W PFA3P42836 336 aa7.03□□□□□ -1.28
SNU71YGR013W ARC1P46672 376 aaKnown RBP7.03□□□□□ -1.28
SNU71YGR013W POL31P46957 487 aa7.03□□□□□ -1.28
SNU71YGR013W TAH11P47112 604 aa7.03□□□□□ -1.28
SNU71YGR013W DSD1P53095 428 aa7.03□□□□□ -1.28
SNU71YGR013W MUS81Q04149 632 aaPredicted RBP7.03□□□□□ -1.28
SNU71YGR013W ISA2Q12425 185 aa7.03□□□□□ -1.28
SNU71YGR013W TUB2P02557 457 aaKnown RBP7.02□□□□□ -1.28
SNU71YGR013W CDC24P11433 854 aaPredicted RBP7.02□□□□□ -1.28
SNU71YGR013W HMG2P12684 1045 aa7.02□□□□□ -1.28
SNU71YGR013W PRP22P24384 1145 aaKnown RBP7.02□□□□□ -1.28
SNU71YGR013W PRE4P30657 266 aa7.02□□□□□ -1.28
SNU71YGR013W POP2P39008 433 aa7.02□□□□□ -1.28
SNU71YGR013W YNL195CP40168 261 aa7.02□□□□□ -1.28
SNU71YGR013W COG1P53079 417 aa7.02□□□□□ -1.28
SNU71YGR013W NGL3Q03210 505 aa7.02□□□□□ -1.28
SNU71YGR013W RMT2Q03305 412 aa7.02□□□□□ -1.28
SNU71YGR013W ENT4Q07872 247 aa7.02□□□□□ -1.28
SNU71YGR013W CHC1P22137 1653 aaKnown RBP7.02□□□□□ -1.29
SNU71YGR013W TY1B-AO13527 1196 aaKnown RBP7.02□□□□□ -1.29
SNU71YGR013W YLR302CO13544 120 aa7.02□□□□□ -1.29
SNU71YGR013W CPA2P03965 1118 aaKnown RBP7.02□□□□□ -1.29
SNU71YGR013W ADE2P21264 571 aaKnown RBP7.02□□□□□ -1.29
SNU71YGR013W YCK2P23292 546 aaKnown RBP7.02□□□□□ -1.29
SNU71YGR013W LCB1P25045 558 aaKnown RBP7.02□□□□□ -1.29
SNU71YGR013W PSD1P39006 500 aa7.02□□□□□ -1.29
SNU71YGR013W YIR007WP40566 764 aa7.02□□□□□ -1.29
SNU71YGR013W TEL2P53038 688 aa7.02□□□□□ -1.29
SNU71YGR013W MDR1P53258 950 aa7.02□□□□□ -1.29
SNU71YGR013W PRP3Q03338 469 aaPredicted RBP7.02□□□□□ -1.29
SNU71YGR013W SIZ1Q04195 904 aa7.02□□□□□ -1.29
SNU71YGR013W GAS5Q08193 484 aa7.02□□□□□ -1.29
SNU71YGR013W CTI6Q08923 506 aa7.02□□□□□ -1.29
SNU71YGR013W PZF1P39933 429 aa7.01□□□□□ -1.29
SNU71YGR013W ARP9Q05123 467 aa7.01□□□□□ -1.29
SNU71YGR013W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
SNU71YGR013W SGO1Q08490 590 aa7.01□□□□□ -1.29
SNU71YGR013W SMF3Q12078 473 aaPredicted RBP7.01□□□□□ -1.29
SNU71YGR013W NBP2Q12163 236 aa7.01□□□□□ -1.29
SNU71YGR013W RPB2P08518 1224 aaKnown RBP7□□□□□ -1.29
SNU71YGR013W YCK1P23291 538 aa7□□□□□ -1.29
SNU71YGR013W MNE1P24720 663 aa7□□□□□ -1.29
SNU71YGR013W AIM26P32858 118 aa7□□□□□ -1.29
SNU71YGR013W CDS1P38221 457 aa7□□□□□ -1.29
SNU71YGR013W ZRG8P40021 1076 aa7□□□□□ -1.29
SNU71YGR013W PRP31P49704 494 aaPredicted RBP7□□□□□ -1.29
SNU71YGR013W YNR061CP53747 219 aa7□□□□□ -1.29
SNU71YGR013W ARG5,6Q01217 863 aa7□□□□□ -1.29
SNU71YGR013W ATG21Q02887 496 aa7□□□□□ -1.29
SNU71YGR013W ADY4Q05955 493 aa7□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 124.9 ms