RNA–Protein interactions for RNA: YGL171W

ROK1, Transcript of RNA-dependent ATPase, yeast

Gene ROK1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROK1	YGL171W	NIP100	P33420	868 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	FLR1	P38124	548 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	SRO77	P38163	1010 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
ROK1	YGL171W	ICP55	P40051	511 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	ZIM17	P42844	174 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	ARC1	P46672	376 aa	Known RBP	4.19	□□□□□ -1.74
ROK1	YGL171W	AIP1	P46680	615 aa	Known RBP	4.19	□□□□□ -1.74
ROK1	YGL171W	VTC4	P47075	721 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	GCV1	P48015	400 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	MTC3	P53077	123 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	SRT1	Q03175	343 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	RSA3	Q05942	220 aa	Known RBP	4.19	□□□□□ -1.74
ROK1	YGL171W	ECM22	Q05958	814 aa	Predicted RBP	4.19	□□□□□ -1.74
ROK1	YGL171W	ENT4	Q07872	247 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	RSB1	Q08417	382 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	COX17	Q12287	69 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	TY1B-DR3	Q99231	1755 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	TUB2	P02557	457 aa	Known RBP	4.19	□□□□□ -1.74
ROK1	YGL171W	CDC24	P11433	854 aa	Predicted RBP	4.19	□□□□□ -1.74
ROK1	YGL171W	LAT1	P12695	482 aa	Known RBP	4.19	□□□□□ -1.74
ROK1	YGL171W	OM45	P16547	393 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	PET123	P17558	318 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	HNM1	P19807	563 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	RFA1	P22336	621 aa	Known RBP	4.19	□□□□□ -1.74
ROK1	YGL171W	PEP3	P27801	918 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	EFT1	P32324	842 aa	Known RBP	4.19	□□□□□ -1.74
ROK1	YGL171W	MRP20	P32387	263 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	NIP1	P32497	812 aa	Known RBP	4.19	□□□□□ -1.74
ROK1	YGL171W	LOT5	P34234	306 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	MRPL16	P38064	232 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	PCH2	P38126	564 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	LYS9	P38999	446 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	MEF2	P39677	819 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	OSW5	P40219	148 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	FET5	P43561	622 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	AGX1	P43567	385 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	IMA1	P53051	589 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	SNF12	P53628	566 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	JJJ1	P53863	590 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	PRO2	P54885	456 aa	Known RBP	4.19	□□□□□ -1.74
ROK1	YGL171W	LEE1	Q02799	301 aa	Known RBP	4.19	□□□□□ -1.74
ROK1	YGL171W	SKG3	Q06315	1026 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	YPR196W	Q06595	470 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
ROK1	YGL171W	PSY3	Q12318	242 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	YRF1-4	O13559	1382 aa		4.19	□□□□□ -1.74
ROK1	YGL171W	TY1B-BR	Q12193	1756 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	TY1B-GR3	Q12316	1755 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	TY2B-B	Q12491	1770 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	TY1B-OR	Q92393	1755 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	CDC19	P00549	500 aa	Known RBP	4.18	□□□□□ -1.74
ROK1	YGL171W	ARG82	P07250	355 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	PWP1	P21304	576 aa	Known RBP	4.18	□□□□□ -1.74
ROK1	YGL171W	YCK1	P23291	538 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	SWH1	P35845	1188 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	HSM3	P38348	480 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	MSC7	P38694	644 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	FLC2	P39719	783 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	YEL057C	P39983	233 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	ATF1	P40353	525 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	SSU1	P41930	458 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
ROK1	YGL171W	GCV2	P49095	1034 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	HFM1	P51979	1187 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	YGR045C	P53229	120 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	GPD1	Q00055	391 aa	Known RBP	4.18	□□□□□ -1.74
ROK1	YGL171W	VTC3	Q02725	835 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	GTB1	Q04924	702 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	YPS7	Q06325	596 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	AAD4	Q07747	329 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	THI21	Q08975	551 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	NMD4	Q12129	218 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	YOR022C	Q12204	715 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	MDY2	Q12285	212 aa		4.18	□□□□□ -1.74
ROK1	YGL171W	SNT2	P53127	1403 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	YLR302C	O13544	120 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	PRC1	P00729	532 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	CBS1	P14066	229 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
ROK1	YGL171W	RSC6	P25632	483 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	ARP2	P32381	391 aa	Known RBP	4.17	□□□□□ -1.74
ROK1	YGL171W	SSE1	P32589	693 aa	Known RBP	4.17	□□□□□ -1.74
ROK1	YGL171W	VPS17	P32913	551 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	MIC60	P36112	540 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	AKL1	P38080	1108 aa	Known RBP	4.17	□□□□□ -1.74
ROK1	YGL171W	SMF1	P38925	575 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	SLN1	P39928	1220 aa	Predicted RBP	4.17	□□□□□ -1.74
ROK1	YGL171W	RPN3	P40016	523 aa	Known RBP	4.17	□□□□□ -1.74
ROK1	YGL171W	CEP3	P40969	608 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	BST1	P43571	1029 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	CUL3	P53202	744 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	HDA1	P53973	706 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	CWC21	Q03375	135 aa	Known RBP	4.17	□□□□□ -1.74
ROK1	YGL171W	YAP6	Q03935	383 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	RAD30	Q04049	632 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	TRI1	Q05024	226 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	HPF1	Q05164	967 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	SPH1	Q06160	661 aa		4.17	□□□□□ -1.74
ROK1	YGL171W	ARV1	Q06541	321 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms