RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C MRPL19P53875 158 aa1.44□□□□□ -2.18
SEC3YER008C ACS1Q01574 713 aa1.44□□□□□ -2.18
SEC3YER008C TAF11Q04226 346 aa1.44□□□□□ -2.18
SEC3YER008C MFB1Q04922 465 aa1.44□□□□□ -2.18
SEC3YER008C UTP21Q06078 939 aaPredicted RBP1.44□□□□□ -2.18
SEC3YER008C YPS7Q06325 596 aa1.44□□□□□ -2.18
SEC3YER008C ESC8Q08119 714 aa1.44□□□□□ -2.18
SEC3YER008C FRE5Q08908 694 aa1.44□□□□□ -2.18
SEC3YER008C ICL2Q12031 575 aa1.44□□□□□ -2.18
SEC3YER008C UPC2Q12151 913 aa1.44□□□□□ -2.18
SEC3YER008C ABF1P14164 731 aa1.43□□□□□ -2.18
SEC3YER008C KIN3P22209 435 aa1.43□□□□□ -2.18
SEC3YER008C RRN3P36070 627 aa1.43□□□□□ -2.18
SEC3YER008C MUM2P38236 366 aa1.43□□□□□ -2.18
SEC3YER008C YIL077CP40508 320 aa1.43□□□□□ -2.18
SEC3YER008C YIR042CP40586 236 aa1.43□□□□□ -2.18
SEC3YER008C SET2P46995 733 aaKnown RBP1.43□□□□□ -2.18
SEC3YER008C BRE5P53741 515 aaKnown RBP1.43□□□□□ -2.18
SEC3YER008C CTF4Q01454 927 aa1.43□□□□□ -2.18
SEC3YER008C NGL3Q03210 505 aa1.43□□□□□ -2.18
SEC3YER008C VTI1Q04338 217 aa1.43□□□□□ -2.18
SEC3YER008C BLS1Q06071 122 aa1.43□□□□□ -2.18
SEC3YER008C CDC45Q08032 650 aa1.43□□□□□ -2.18
SEC3YER008C RIB2Q12362 591 aaKnown RBP1.43□□□□□ -2.18
SEC3YER008C YBR182C-AQ8TGU6 64 aa1.43□□□□□ -2.18
SEC3YER008C ADE3P07245 946 aaKnown RBP1.43□□□□□ -2.18
SEC3YER008C ALG7P07286 448 aa1.43□□□□□ -2.18
SEC3YER008C PHO3P24031 467 aa1.43□□□□□ -2.18
SEC3YER008C GCD7P32502 381 aaPredicted RBP1.43□□□□□ -2.18
SEC3YER008C STB5P38699 743 aa1.43□□□□□ -2.18
SEC3YER008C PPE1P38796 400 aa1.43□□□□□ -2.18
SEC3YER008C FMP10P40098 244 aa1.43□□□□□ -2.18
SEC3YER008C MET12P46151 657 aa1.43□□□□□ -2.18
SEC3YER008C SLD3P53135 668 aa1.43□□□□□ -2.18
SEC3YER008C CLU1Q03690 1277 aaKnown RBP1.43□□□□□ -2.18
SEC3YER008C NSE5Q03718 556 aa1.43□□□□□ -2.18
SEC3YER008C PPN1Q04119 674 aa1.43□□□□□ -2.18
SEC3YER008C SNO4Q04902 237 aa1.43□□□□□ -2.18
SEC3YER008C HBT1Q07653 1046 aaKnown RBP1.43□□□□□ -2.18
SEC3YER008C HSP33Q08914 237 aaKnown RBP1.43□□□□□ -2.18
SEC3YER008C HSP32Q08992 237 aa1.43□□□□□ -2.18
SEC3YER008C TRM11Q12463 433 aa1.43□□□□□ -2.18
SEC3YER008C HKR1P41809 1802 aa1.43□□□□□ -2.18
SEC3YER008C SOD2P00447 233 aa1.43□□□□□ -2.18
SEC3YER008C ERG4P25340 473 aa1.43□□□□□ -2.18
SEC3YER008C NPR2P39923 615 aa1.43□□□□□ -2.18
SEC3YER008C SMK1P41808 388 aa1.43□□□□□ -2.18
SEC3YER008C RET2P43621 546 aa1.43□□□□□ -2.18
SEC3YER008C YGR016WP53209 190 aa1.43□□□□□ -2.18
SEC3YER008C VPS62P53285 467 aa1.43□□□□□ -2.18
SEC3YER008C CBK1P53894 756 aa1.43□□□□□ -2.18
SEC3YER008C ASI2P53895 289 aa1.43□□□□□ -2.18
SEC3YER008C VID22Q05934 901 aa1.43□□□□□ -2.18
SEC3YER008C ADY3Q07732 790 aa1.43□□□□□ -2.18
SEC3YER008C ZRT2Q12436 422 aa1.43□□□□□ -2.18
SEC3YER008C NOP56Q12460 504 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
SEC3YER008C PGA3Q12746 312 aaKnown RBP1.43□□□□□ -2.18
SEC3YER008C NUC1P08466 329 aa1.43□□□□□ -2.18
SEC3YER008C CBP3P21560 335 aa1.43□□□□□ -2.18
SEC3YER008C EFT1P32324 842 aaKnown RBP1.43□□□□□ -2.18
SEC3YER008C PAH1P32567 862 aa1.43□□□□□ -2.18
SEC3YER008C SLC1P33333 303 aa1.43□□□□□ -2.18
SEC3YER008C DID4P36108 232 aa1.43□□□□□ -2.18
SEC3YER008C SRO77P38163 1010 aa1.43□□□□□ -2.18
SEC3YER008C MTG2P38860 518 aa1.43□□□□□ -2.18
SEC3YER008C ELO3P40319 345 aa1.43□□□□□ -2.18
SEC3YER008C PXA1P41909 870 aa1.43□□□□□ -2.18
SEC3YER008C REC102Q02721 264 aa1.43□□□□□ -2.18
SEC3YER008C GRX3Q03835 250 aa1.43□□□□□ -2.18
SEC3YER008C SYF1Q04048 859 aaPredicted RBP1.43□□□□□ -2.18
SEC3YER008C COG8Q04632 607 aa1.43□□□□□ -2.18
SEC3YER008C YLR407WQ06070 228 aa1.43□□□□□ -2.18
SEC3YER008C YLR352WQ06479 807 aa1.43□□□□□ -2.18
SEC3YER008C SPN1Q06505 410 aaPredicted RBP1.43□□□□□ -2.18
SEC3YER008C IRC13Q08630 104 aa1.43□□□□□ -2.18
SEC3YER008C YOR389WQ08912 624 aa1.43□□□□□ -2.18
SEC3YER008C GLK1P17709 500 aaKnown RBP1.42□□□□□ -2.18
SEC3YER008C FUR1P18562 216 aaKnown RBP1.42□□□□□ -2.18
SEC3YER008C MRPL9P31334 269 aa1.42□□□□□ -2.18
SEC3YER008C MFT1P33441 392 aaKnown RBP1.42□□□□□ -2.18
SEC3YER008C PTH2P34222 208 aa1.42□□□□□ -2.18
SEC3YER008C BYE1P36106 594 aa1.42□□□□□ -2.18
SEC3YER008C ESL2P36168 1195 aa1.42□□□□□ -2.18
SEC3YER008C APE4P38821 490 aa1.42□□□□□ -2.18
SEC3YER008C CTF8P38877 133 aa1.42□□□□□ -2.18
SEC3YER008C SWD1P39706 426 aa1.42□□□□□ -2.18
SEC3YER008C SGN1P40561 250 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
SEC3YER008C RMD8P43620 662 aa1.42□□□□□ -2.18
SEC3YER008C DSD1P53095 428 aa1.42□□□□□ -2.18
SEC3YER008C YLR345WQ06137 509 aa1.42□□□□□ -2.18
SEC3YER008C TFC6Q06339 672 aa1.42□□□□□ -2.18
SEC3YER008C PEX15Q08215 383 aa1.42□□□□□ -2.18
SEC3YER008C HFI1Q12060 488 aa1.42□□□□□ -2.18
SEC3YER008C RPS17AP02407 136 aaKnown RBP1.42□□□□□ -2.18
SEC3YER008C YEL076C-AP0CX16 216 aa1.42□□□□□ -2.18
SEC3YER008C YLR464WP0CX17 216 aa1.42□□□□□ -2.18
SEC3YER008C PCK1P10963 549 aa1.42□□□□□ -2.18
SEC3YER008C RPS17BP14127 136 aaKnown RBP1.42□□□□□ -2.18
SEC3YER008C POL3P15436 1097 aa1.42□□□□□ -2.18
SEC3YER008C KIN82P25341 720 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms