RNA–Protein interactions for RNA: YEL024W

RIP1, Transcript of Ubiquinol-cytochrome-c reductase, yeast

Gene RIP1, Length 648 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIP1	YEL024W	YHL008C	P38750	627 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	CRP1	P38845	465 aa	Known RBP	4.63	□□□□□ -1.67
RIP1	YEL024W	TDA11	P38854	504 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	STL1	P39932	569 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	YIL054W	P40524	105 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	LAM5	P43560	674 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	RPS0B	P46654	252 aa	Known RBP	4.63	□□□□□ -1.67
RIP1	YEL024W	TAF1	P46677	1066 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	IML2	P47031	731 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	NET1	P47035	1189 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	YJR054W	P47114	497 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	CTR1	P49573	406 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	PSP2	P50109	593 aa	Known RBP	4.63	□□□□□ -1.67
RIP1	YEL024W	NUP84	P52891	726 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	RRT6	P53117	311 aa	Predicted RBP	4.63	□□□□□ -1.67
RIP1	YEL024W	YGL036W	P53185	909 aa	Predicted RBP	4.63	□□□□□ -1.67
RIP1	YEL024W	PXR1	P53335	271 aa	Predicted RBP	4.63	□□□□□ -1.67
RIP1	YEL024W	BIO4	P53630	237 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	DSL1	P53847	754 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	UBX4	P54730	416 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	ATP25	Q03153	612 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	HOT1	Q03213	719 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	TRS130	Q03660	1102 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	YML020W	Q03722	664 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	YKU80	Q04437	629 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	YDR278C	Q05612	105 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	YLR455W	Q06188	304 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	YET3	Q07451	203 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	SHS1	Q07657	551 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	THI21	Q08975	551 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	SPE3	Q12074	293 aa	Known RBP	4.63	□□□□□ -1.67
RIP1	YEL024W	NKP1	Q12493	238 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	KCS1	Q12494	1050 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	ATG11	Q12527	1178 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	RTP1	Q12751	981 aa		4.63	□□□□□ -1.67
RIP1	YEL024W	RPL24A	P04449	155 aa	Known RBP	4.62	□□□□□ -1.67
RIP1	YEL024W	RAD10	P06838	210 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	FBP1	P09201	348 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	SEC63	P14906	663 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	SNT1	P25357	1226 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	HRR25	P29295	494 aa	Known RBP	4.62	□□□□□ -1.67
RIP1	YEL024W	MRP4	P32902	394 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	HES1	P35843	434 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	YKR078W	P36158	585 aa	Known RBP	4.62	□□□□□ -1.67
RIP1	YEL024W	TGL4	P36165	910 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	GIP1	P38229	639 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	YBR259W	P38338	688 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	TSC10	P38342	320 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	OTU2	P38747	307 aa	Known RBP	4.62	□□□□□ -1.67
RIP1	YEL024W	YJL206C	P39529	758 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	FLC2	P39719	783 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	OAF1	P39720	1047 aa	Predicted RBP	4.62	□□□□□ -1.67
RIP1	YEL024W	GEM1	P39722	662 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	SAW1	P39735	261 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	PDS1	P40316	373 aa	Predicted RBP	4.62	□□□□□ -1.67
RIP1	YEL024W	PFK26	P40433	827 aa	Known RBP	4.62	□□□□□ -1.67
RIP1	YEL024W	SEC28	P40509	296 aa	Known RBP	4.62	□□□□□ -1.67
RIP1	YEL024W	IAH1	P41734	238 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	YJL107C	P42947	387 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	GCN20	P43535	752 aa	Known RBP	4.62	□□□□□ -1.67
RIP1	YEL024W	MNN11	P46985	422 aa	Known RBP	4.62	□□□□□ -1.67
RIP1	YEL024W	YJL045W	P47052	634 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	TRF5	P48561	642 aa	Known RBP	4.62	□□□□□ -1.67
RIP1	YEL024W	RFX1	P48743	811 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	NUT1	P53114	1132 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	USE1	P53146	245 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	NMA2	P53204	395 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	YPR003C	P53394	754 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
RIP1	YEL024W	ACL4	Q03771	387 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	SND1	Q04007	877 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	ARO80	Q04052	950 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	YSH1	Q06224	779 aa	Predicted RBP	4.62	□□□□□ -1.67
RIP1	YEL024W	SNX3	Q08826	162 aa	Known RBP	4.62	□□□□□ -1.67
RIP1	YEL024W	IES3	Q12345	250 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	ERP3	Q12403	225 aa		4.62	□□□□□ -1.67
RIP1	YEL024W	PDC5	P16467	563 aa	Known RBP	4.61	□□□□□ -1.67
RIP1	YEL024W	TYR1	P20049	452 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	AFT1	P22149	690 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	PHO87	P25360	923 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	ATP7	P30902	174 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	TFC1	P32367	649 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	DPH5	P32469	300 aa	Predicted RBP	4.61	□□□□□ -1.67
RIP1	YEL024W	SPR1	P32603	445 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	SHP1	P34223	423 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	RRP14	P36080	434 aa	Known RBP	4.61	□□□□□ -1.67
RIP1	YEL024W	PAM1	P37304	830 aa	Known RBP	4.61	□□□□□ -1.67
RIP1	YEL024W	CTP1	P38152	299 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	SHE3	P38272	425 aa	Known RBP	4.61	□□□□□ -1.67
RIP1	YEL024W	YBP1	P38315	674 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	YHR054C	P38780	354 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	RSC30	P38781	883 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	BZZ1	P38822	633 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	DPH1	P40487	425 aa	Known RBP	4.61	□□□□□ -1.67
RIP1	YEL024W	SAD1	P43589	448 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	POL31	P46957	487 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	YJL132W	P47014	750 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	RSM26	P47141	266 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	AZR1	P50080	613 aa		4.61	□□□□□ -1.67
RIP1	YEL024W	RPA14	P50106	137 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms