RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W RTA1P53047 317 aa1.76□□□□□ -2.13
CFT1YDR301W STR3P53101 465 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W KXD1P53158 218 aa1.76□□□□□ -2.13
CFT1YDR301W RCF2P53721 224 aa1.76□□□□□ -2.13
CFT1YDR301W PIR3Q03180 325 aa1.76□□□□□ -2.13
CFT1YDR301W CWC21Q03375 135 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W CEF1Q03654 590 aaPredicted RBP1.76□□□□□ -2.13
CFT1YDR301W GYL1Q04322 720 aa1.76□□□□□ -2.13
CFT1YDR301W HEL2Q05580 639 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W YDL121CQ07541 149 aa1.76□□□□□ -2.13
CFT1YDR301W DAP1Q12091 152 aa1.76□□□□□ -2.13
CFT1YDR301W YLL056CQ12177 298 aa1.76□□□□□ -2.13
CFT1YDR301W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
CFT1YDR301W PYC1P11154 1178 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W CAD1P24813 409 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W PUF4P25339 888 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
CFT1YDR301W PAP1P29468 568 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W HEM12P32347 362 aaPredicted RBP1.76□□□□□ -2.13
CFT1YDR301W UBC6P33296 250 aaPredicted RBP1.76□□□□□ -2.13
CFT1YDR301W SEG2P34250 1132 aa1.76□□□□□ -2.13
CFT1YDR301W SPC42P36094 363 aa1.76□□□□□ -2.13
CFT1YDR301W YHL041WP38730 149 aa1.76□□□□□ -2.13
CFT1YDR301W SOL3P38858 249 aa1.76□□□□□ -2.13
CFT1YDR301W DPH1P40487 425 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W YIL054WP40524 105 aa1.76□□□□□ -2.13
CFT1YDR301W DLD2P46681 530 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W BUD13P46947 266 aaPredicted RBP1.76□□□□□ -2.13
CFT1YDR301W PFD1P46988 109 aa1.76□□□□□ -2.13
CFT1YDR301W PET130P47065 347 aa1.76□□□□□ -2.13
CFT1YDR301W PRP31P49704 494 aaPredicted RBP1.76□□□□□ -2.13
CFT1YDR301W INP52P50942 1183 aa1.76□□□□□ -2.13
CFT1YDR301W YGR283CP53336 341 aaPredicted RBP1.76□□□□□ -2.13
CFT1YDR301W YNL040WP53960 456 aaPredicted RBP1.76□□□□□ -2.13
CFT1YDR301W PMT7Q06644 662 aa1.76□□□□□ -2.13
CFT1YDR301W ATG23Q06671 453 aa1.76□□□□□ -2.13
CFT1YDR301W TPO1Q07824 586 aa1.76□□□□□ -2.13
CFT1YDR301W PIN2Q12057 282 aa1.76□□□□□ -2.13
CFT1YDR301W SVS1Q12254 260 aa1.76□□□□□ -2.13
CFT1YDR301W FRT1Q99332 602 aa1.76□□□□□ -2.13
CFT1YDR301W CDC8P00572 216 aa1.76□□□□□ -2.13
CFT1YDR301W GCR1P07261 785 aa1.76□□□□□ -2.13
CFT1YDR301W APE1P14904 514 aa1.76□□□□□ -2.13
CFT1YDR301W PRP9P19736 530 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W MFT1P33441 392 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W POP4P38336 279 aa1.76□□□□□ -2.13
CFT1YDR301W NEM1P38757 446 aa1.76□□□□□ -2.13
CFT1YDR301W YHR219WP38900 624 aa1.76□□□□□ -2.13
CFT1YDR301W MNN1P39106 762 aa1.76□□□□□ -2.13
CFT1YDR301W NUP60P39705 539 aa1.76□□□□□ -2.13
CFT1YDR301W RPH1P39956 796 aa1.76□□□□□ -2.13
CFT1YDR301W HEM14P40012 539 aa1.76□□□□□ -2.13
CFT1YDR301W FMP10P40098 244 aa1.76□□□□□ -2.13
CFT1YDR301W YMR134WP40207 237 aa1.76□□□□□ -2.13
CFT1YDR301W MEP1P40260 492 aa1.76□□□□□ -2.13
CFT1YDR301W ELO3P40319 345 aa1.76□□□□□ -2.13
CFT1YDR301W LSB3P43603 459 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W COP1P53622 1201 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W YNR014WP53719 212 aa1.76□□□□□ -2.13
CFT1YDR301W SPP2Q02521 185 aa1.76□□□□□ -2.13
CFT1YDR301W SHR3Q02774 210 aa1.76□□□□□ -2.13
CFT1YDR301W RTN1Q04947 295 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W PNP1Q05788 311 aa1.76□□□□□ -2.13
CFT1YDR301W YPR097WQ06839 1073 aa1.76□□□□□ -2.13
CFT1YDR301W ADY3Q07732 790 aa1.76□□□□□ -2.13
CFT1YDR301W YOL036WQ08206 761 aa1.76□□□□□ -2.13
CFT1YDR301W CUE5Q08412 411 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W NRT1Q08485 598 aa1.76□□□□□ -2.13
CFT1YDR301W THI21Q08975 551 aa1.76□□□□□ -2.13
CFT1YDR301W REC8Q12188 680 aa1.76□□□□□ -2.13
CFT1YDR301W HOS1Q12214 470 aa1.76□□□□□ -2.13
CFT1YDR301W HRT3Q12347 344 aa1.76□□□□□ -2.13
CFT1YDR301W AHC1Q12433 566 aa1.76□□□□□ -2.13
CFT1YDR301W YDR034W-BQ6Q5X2 51 aa1.76□□□□□ -2.13
CFT1YDR301W ILV2P07342 687 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W TRM1P15565 570 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W PET123P17558 318 aa1.76□□□□□ -2.13
CFT1YDR301W HSP60P19882 572 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W AMD2P22580 549 aa1.76□□□□□ -2.13
CFT1YDR301W LAS1P36146 502 aaPredicted RBP1.76□□□□□ -2.13
CFT1YDR301W MRPL40P36534 297 aa1.76□□□□□ -2.13
CFT1YDR301W SIF2P38262 535 aa1.76□□□□□ -2.13
CFT1YDR301W SPP381P38282 291 aaPredicted RBP1.76□□□□□ -2.13
CFT1YDR301W EDC3P39998 551 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W MOB1P40484 314 aa1.76□□□□□ -2.13
CFT1YDR301W SEC28P40509 296 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W IST3P40565 148 aaPredicted RBP1.76□□□□□ -2.13
CFT1YDR301W CDC1P40986 491 aa1.76□□□□□ -2.13
CFT1YDR301W RRT5P43607 289 aa1.76□□□□□ -2.13
CFT1YDR301W SET2P46995 733 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W FLC3P53121 802 aa1.76□□□□□ -2.13
CFT1YDR301W PCL10P53124 433 aa1.76□□□□□ -2.13
CFT1YDR301W UTP8P53276 713 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W RNT1Q02555 471 aa1.76□□□□□ -2.13
CFT1YDR301W EMI2Q04409 500 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W STE23Q06010 1027 aa1.76□□□□□ -2.13
CFT1YDR301W NUT2Q06213 157 aa1.76□□□□□ -2.13
CFT1YDR301W PUN1Q06991 263 aa1.76□□□□□ -2.13
CFT1YDR301W MPC54Q08550 464 aa1.76□□□□□ -2.13
CFT1YDR301W TMA46Q12000 345 aaKnown RBP1.76□□□□□ -2.13
CFT1YDR301W MCD1Q12158 566 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms