RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	TSC10	P38342	320 aa		4.4	□□□□□ -1.7
UPC2	YDR213W	YLF2	P38746	405 aa		4.4	□□□□□ -1.7
UPC2	YDR213W	PSY2	P40164	858 aa		4.4	□□□□□ -1.7
UPC2	YDR213W	MET18	P40469	1032 aa		4.4	□□□□□ -1.7
UPC2	YDR213W	HPM1	P40481	377 aa		4.4	□□□□□ -1.7
UPC2	YDR213W	NNF1	P47149	201 aa		4.4	□□□□□ -1.7
UPC2	YDR213W	ECL1	P48235	211 aa		4.4	□□□□□ -1.7
UPC2	YDR213W	VMA10	P48836	114 aa	Known RBP	4.4	□□□□□ -1.7
UPC2	YDR213W	NOG1	Q02892	647 aa	Known RBP	4.4	□□□□□ -1.7
UPC2	YDR213W	TDA5	Q06417	326 aa	Known RBP	4.4	□□□□□ -1.7
UPC2	YDR213W	MCP2	Q06567	569 aa		4.4	□□□□□ -1.7
UPC2	YDR213W	REH1	Q06709	432 aa		4.4	□□□□□ -1.7
UPC2	YDR213W	THI20	Q08224	551 aa		4.4	□□□□□ -1.7
UPC2	YDR213W	NOT5	Q12514	560 aa	Predicted RBP	4.4	□□□□□ -1.7
UPC2	YDR213W	RIM15	P43565	1770 aa		4.4	□□□□□ -1.7
UPC2	YDR213W	FUR4	P05316	633 aa	Known RBP	4.4	□□□□□ -1.71
UPC2	YDR213W	PHO81	P17442	1178 aa		4.4	□□□□□ -1.71
UPC2	YDR213W	AEP2	P22136	580 aa		4.4	□□□□□ -1.71
UPC2	YDR213W	PAT1	P25644	796 aa	Known RBP	4.4	□□□□□ -1.71
UPC2	YDR213W	CCR4	P31384	837 aa	Known RBP	4.4	□□□□□ -1.71
UPC2	YDR213W	TRM2	P33753	639 aa		4.4	□□□□□ -1.71
UPC2	YDR213W	SAS3	P34218	831 aa		4.4	□□□□□ -1.71
UPC2	YDR213W	FTR1	P40088	404 aa		4.4	□□□□□ -1.71
UPC2	YDR213W	CHS6	P40955	746 aa		4.4	□□□□□ -1.71
UPC2	YDR213W	MAD3	P47074	515 aa		4.4	□□□□□ -1.71
UPC2	YDR213W	MDE1	P47095	244 aa		4.4	□□□□□ -1.71
UPC2	YDR213W	CTR1	P49573	406 aa		4.4	□□□□□ -1.71
UPC2	YDR213W	RET3	P53600	189 aa		4.4	□□□□□ -1.71
UPC2	YDR213W	YVH1	Q02256	364 aa	Known RBP	4.4	□□□□□ -1.71
UPC2	YDR213W	SYH1	Q02875	849 aa	Known RBP	4.4	□□□□□ -1.71
UPC2	YDR213W	YDR239C	Q03780	787 aa		4.4	□□□□□ -1.71
UPC2	YDR213W	RAD30	Q04049	632 aa		4.4	□□□□□ -1.71
UPC2	YDR213W	YLR297W	Q05899	129 aa		4.4	□□□□□ -1.71
UPC2	YDR213W	SEC10	Q06245	871 aa		4.4	□□□□□ -1.71
UPC2	YDR213W	FAP7	Q12055	197 aa	Predicted RBP	4.4	□□□□□ -1.71
UPC2	YDR213W	CDC33	P07260	213 aa	Known RBP	4.39	□□□□□ -1.71
UPC2	YDR213W	EXO70	P19658	623 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	HSP60	P19882	572 aa	Known RBP	4.39	□□□□□ -1.71
UPC2	YDR213W	PHO3	P24031	467 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	CLB3	P24870	427 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	VAC17	P25591	423 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	EUG1	P32474	517 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	UGP1	P32861	499 aa	Known RBP	4.39	□□□□□ -1.71
UPC2	YDR213W	RPT1	P33299	467 aa	Known RBP	4.39	□□□□□ -1.71
UPC2	YDR213W	YBR197C	P38306	217 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	YJL206C	P39529	758 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	UBP7	P40453	1071 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	HXT8	P40886	569 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	MRK1	P50873	501 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	MIG2	P53035	382 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	YGL108C	P53139	140 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	SPC105	P53148	917 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	YGR054W	P53235	642 aa	Known RBP	4.39	□□□□□ -1.71
UPC2	YDR213W	PRO2	P54885	456 aa	Known RBP	4.39	□□□□□ -1.71
UPC2	YDR213W	CSM3	Q04659	317 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	HDA3	Q06623	655 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	AAD15	Q08361	143 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	YOR059C	Q08448	450 aa	Known RBP	4.39	□□□□□ -1.71
UPC2	YDR213W	PIN2	Q12057	282 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	YBL029C-A	Q3E756	94 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	CTT1	P06115	562 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	RAD10	P06838	210 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	CMK1	P27466	446 aa	Known RBP	4.39	□□□□□ -1.71
UPC2	YDR213W	HEM12	P32347	362 aa	Predicted RBP	4.39	□□□□□ -1.71
UPC2	YDR213W	NGG1	P32494	702 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	ETR1	P38071	380 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	POP4	P38336	279 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	SHU2	P38957	223 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	DLD3	P39976	496 aa	Known RBP	4.39	□□□□□ -1.71
UPC2	YDR213W	ASG1	P40467	964 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	PRK1	P40494	810 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	YRB2	P40517	327 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	FAR3	P46671	204 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	NCS6	P53088	359 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	LSG1	P53145	640 aa	Known RBP	4.39	□□□□□ -1.71
UPC2	YDR213W	NSG2	P53898	299 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	DAK1	P54838	584 aa	Known RBP	4.39	□□□□□ -1.71
UPC2	YDR213W	ADE13	Q05911	482 aa	Known RBP	4.39	□□□□□ -1.71
UPC2	YDR213W	SUE1	Q06524	206 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	DSE3	Q08729	430 aa		4.39	□□□□□ -1.71
UPC2	YDR213W	THP3	Q12049	470 aa	Known RBP	4.39	□□□□□ -1.71
UPC2	YDR213W	ILV1	P00927	576 aa	Known RBP	4.38	□□□□□ -1.71
UPC2	YDR213W	RAD18	P10862	487 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	CDC24	P11433	854 aa	Predicted RBP	4.38	□□□□□ -1.71
UPC2	YDR213W	CHS2	P14180	963 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	MSD1	P15179	658 aa	Known RBP	4.38	□□□□□ -1.71
UPC2	YDR213W	DBP5	P20449	482 aa	Known RBP	4.38	□□□□□ -1.71
UPC2	YDR213W	YCR016W	P25617	290 aa	Known RBP	4.38	□□□□□ -1.71
UPC2	YDR213W	PTP2	P29461	750 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	MEI5	P32489	222 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	PET100	P38958	111 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	SNL1	P40548	159 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	PAN2	P53010	1115 aa	Predicted RBP	4.38	□□□□□ -1.71
UPC2	YDR213W	BNI4	P53858	892 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	SED5	Q01590	340 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	UFO1	Q04511	668 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
UPC2	YDR213W	YEH2	Q07950	538 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	TRE1	Q08919	783 aa		4.38	□□□□□ -1.71
UPC2	YDR213W	APC9	Q12107	265 aa		4.38	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms