RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM1	YDR120C	SEC7	P11075	2009 aa	Known RBP	4.88	□□□□□ -1.63
TRM1	YDR120C	NTH1	P32356	751 aa		4.88	□□□□□ -1.63
TRM1	YDR120C	CTP1	P38152	299 aa		4.88	□□□□□ -1.63
TRM1	YDR120C	ACA1	P39970	489 aa		4.88	□□□□□ -1.63
TRM1	YDR120C	MSE1	P48525	536 aa		4.88	□□□□□ -1.63
TRM1	YDR120C	YGR021W	P53212	290 aa		4.88	□□□□□ -1.63
TRM1	YDR120C	MDR1	P53258	950 aa		4.88	□□□□□ -1.63
TRM1	YDR120C	YLF2	P38746	405 aa		4.87	□□□□□ -1.63
TRM1	YDR120C	MAD3	P47074	515 aa		4.87	□□□□□ -1.63
TRM1	YDR120C	HIM1	Q06674	414 aa		4.87	□□□□□ -1.63
TRM1	YDR120C	IZH3	Q07959	543 aa		4.87	□□□□□ -1.63
TRM1	YDR120C	USV1	Q12132	391 aa		4.87	□□□□□ -1.63
TRM1	YDR120C	TUB2	P02557	457 aa	Known RBP	4.86	□□□□□ -1.63
TRM1	YDR120C	PHO81	P17442	1178 aa		4.86	□□□□□ -1.63
TRM1	YDR120C	PTH2	P34222	208 aa		4.86	□□□□□ -1.63
TRM1	YDR120C	YGR054W	P53235	642 aa	Known RBP	4.86	□□□□□ -1.63
TRM1	YDR120C	SSL2	Q00578	843 aa		4.86	□□□□□ -1.63
TRM1	YDR120C	CEF1	Q03654	590 aa	Predicted RBP	4.86	□□□□□ -1.63
TRM1	YDR120C	ARR3	Q06598	404 aa		4.86	□□□□□ -1.63
TRM1	YDR120C	MCH5	Q08777	521 aa		4.86	□□□□□ -1.63
TRM1	YDR120C	PUS9	Q12069	462 aa		4.86	□□□□□ -1.63
TRM1	YDR120C	ABF1	P14164	731 aa		4.86	□□□□□ -1.63
TRM1	YDR120C	TRX2	P22803	104 aa	Known RBP	4.86	□□□□□ -1.63
TRM1	YDR120C	FUB1	P25659	250 aa		4.86	□□□□□ -1.63
TRM1	YDR120C	MSH1	P25846	959 aa		4.86	□□□□□ -1.63
TRM1	YDR120C	YKL222C	P35995	705 aa		4.86	□□□□□ -1.63
TRM1	YDR120C	SET3	P36124	751 aa		4.86	□□□□□ -1.63
TRM1	YDR120C	YHL017W	P38745	532 aa		4.86	□□□□□ -1.63
TRM1	YDR120C	RPT2	P40327	437 aa	Known RBP	4.86	□□□□□ -1.63
TRM1	YDR120C	LRO1	P40345	661 aa		4.86	□□□□□ -1.63
TRM1	YDR120C	UBA2	P52488	636 aa		4.86	□□□□□ -1.63
TRM1	YDR120C	SEC18	P18759	758 aa	Known RBP	4.85	□□□□□ -1.63
TRM1	YDR120C	APM3	P38153	483 aa		4.85	□□□□□ -1.63
TRM1	YDR120C	PCL5	P38794	229 aa		4.85	□□□□□ -1.63
TRM1	YDR120C	YHR097C	P38809	366 aa	Known RBP	4.85	□□□□□ -1.63
TRM1	YDR120C	CHS7	P38843	316 aa		4.85	□□□□□ -1.63
TRM1	YDR120C	YEL025C	P39991	1188 aa		4.85	□□□□□ -1.63
TRM1	YDR120C	VPS27	P40343	622 aa	Known RBP	4.85	□□□□□ -1.63
TRM1	YDR120C	GSM1	P42950	618 aa		4.85	□□□□□ -1.63
TRM1	YDR120C	YGR151C	P53287	111 aa		4.85	□□□□□ -1.63
TRM1	YDR120C	ATG4	P53867	494 aa		4.85	□□□□□ -1.63
TRM1	YDR120C	MUK1	Q02866	612 aa		4.85	□□□□□ -1.63
TRM1	YDR120C	YMR206W	Q03695	313 aa		4.85	□□□□□ -1.63
TRM1	YDR120C	EIS1	Q05050	843 aa	Known RBP	4.85	□□□□□ -1.63
TRM1	YDR120C	YSH1	Q06224	779 aa	Predicted RBP	4.85	□□□□□ -1.63
TRM1	YDR120C	YDL086W	Q07505	273 aa		4.85	□□□□□ -1.63
TRM1	YDR120C	GEA1	P47102	1408 aa	Predicted RBP	4.85	□□□□□ -1.63
TRM1	YDR120C	YSP2	Q06681	1438 aa		4.85	□□□□□ -1.63
TRM1	YDR120C	VPS33	P20795	691 aa		4.84	□□□□□ -1.63
TRM1	YDR120C	DBF20	P32328	564 aa		4.84	□□□□□ -1.63
TRM1	YDR120C	MRS6	P32864	603 aa	Known RBP	4.84	□□□□□ -1.63
TRM1	YDR120C	STT3	P39007	718 aa	Known RBP	4.84	□□□□□ -1.63
TRM1	YDR120C	SMX3	P54999	86 aa	Predicted RBP	4.84	□□□□□ -1.63
TRM1	YDR120C	PCK1	P10963	549 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	MSM1	P22438	575 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	ELF1	P36053	145 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	MRPL7	P36519	292 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	UBS1	P38290	277 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	YJL193W	P39542	402 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	SPC72	P39723	622 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	AAD4	Q07747	329 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	YBT1	P32386	1661 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	SEC12	P11655	471 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	DPB3	P27344	201 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	CBR1	P38626	284 aa	Known RBP	4.83	□□□□□ -1.64
TRM1	YDR120C	PPE1	P38796	400 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	SAP185	P40856	1058 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	SNF12	P53628	566 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	ACS1	Q01574	713 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	CIA1	Q05583	330 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	CRD1	Q07560	283 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	ACF2	Q12168	779 aa		4.83	□□□□□ -1.64
TRM1	YDR120C	USO1	P25386	1790 aa		4.82	□□□□□ -1.64
TRM1	YDR120C	PRP45	P28004	379 aa	Predicted RBP	4.82	□□□□□ -1.64
TRM1	YDR120C	DHR2	P36009	735 aa	Predicted RBP	4.82	□□□□□ -1.64
TRM1	YDR120C	ARG2	P40360	574 aa		4.82	□□□□□ -1.64
TRM1	YDR120C	NDC80	P40460	691 aa		4.82	□□□□□ -1.64
TRM1	YDR120C	DIP5	P53388	608 aa		4.82	□□□□□ -1.64
TRM1	YDR120C	CPR6	P53691	371 aa	Known RBP	4.82	□□□□□ -1.64
TRM1	YDR120C	EFR3	Q03653	782 aa	Known RBP	4.82	□□□□□ -1.64
TRM1	YDR120C	ENT2	Q05785	613 aa		4.82	□□□□□ -1.64
TRM1	YDR120C	PSR2	Q07949	397 aa		4.82	□□□□□ -1.64
TRM1	YDR120C	SIR1	P21691	654 aa		4.81	□□□□□ -1.64
TRM1	YDR120C	MCM3	P24279	971 aa	Known RBP	4.81	□□□□□ -1.64
TRM1	YDR120C	APL3	P38065	1025 aa		4.81	□□□□□ -1.64
TRM1	YDR120C	KSP1	P38691	1029 aa	Known RBP	4.81	□□□□□ -1.64
TRM1	YDR120C	STB4	P50104	949 aa		4.81	□□□□□ -1.64
TRM1	YDR120C	NMA2	P53204	395 aa		4.81	□□□□□ -1.64
TRM1	YDR120C	RKI1	Q12189	258 aa		4.81	□□□□□ -1.64
TRM1	YDR120C	PHO5	P00635	467 aa		4.8	□□□□□ -1.64
TRM1	YDR120C	DSS4	P32601	143 aa		4.8	□□□□□ -1.64
TRM1	YDR120C	FRD1	P32614	470 aa	Known RBP	4.8	□□□□□ -1.64
TRM1	YDR120C	STB5	P38699	743 aa		4.8	□□□□□ -1.64
TRM1	YDR120C	ERR3	P42222	437 aa		4.8	□□□□□ -1.64
TRM1	YDR120C	POL31	P46957	487 aa		4.8	□□□□□ -1.64
TRM1	YDR120C	CTR1	P49573	406 aa		4.8	□□□□□ -1.64
TRM1	YDR120C	UFO1	Q04511	668 aa		4.8	□□□□□ -1.64
TRM1	YDR120C	GSF2	Q04697	403 aa	Known RBP	4.8	□□□□□ -1.64
TRM1	YDR120C	HBT1	Q07653	1046 aa	Known RBP	4.8	□□□□□ -1.64
TRM1	YDR120C	POL3	P15436	1097 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 8 ms