RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C SPO71Q03868 1245 aa1.12□□□□□ -2.23
VAM6YDL077C YDR179W-AQ03983 463 aa1.12□□□□□ -2.23
VAM6YDL077C PLP1Q04004 230 aa1.12□□□□□ -2.23
VAM6YDL077C PPM1Q04081 328 aa1.12□□□□□ -2.23
VAM6YDL077C GIS4Q04233 774 aa1.12□□□□□ -2.23
VAM6YDL077C SVF1Q05515 481 aa1.12□□□□□ -2.23
VAM6YDL077C YLR407WQ06070 228 aa1.12□□□□□ -2.23
VAM6YDL077C YPQ2Q06328 317 aa1.12□□□□□ -2.23
VAM6YDL077C NSE1Q07913 336 aa1.12□□□□□ -2.23
VAM6YDL077C SLD7Q08457 257 aa1.12□□□□□ -2.23
VAM6YDL077C TRE1Q08919 783 aa1.12□□□□□ -2.23
VAM6YDL077C MRN1Q08925 612 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
VAM6YDL077C RCN2Q12044 265 aa1.12□□□□□ -2.23
VAM6YDL077C BAG7Q12128 409 aa1.12□□□□□ -2.23
VAM6YDL077C YOL107WQ12239 342 aa1.12□□□□□ -2.23
VAM6YDL077C MDM20Q12387 796 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C ATG11Q12527 1178 aa1.12□□□□□ -2.23
VAM6YDL077C YOR111WQ99210 232 aa1.12□□□□□ -2.23
VAM6YDL077C DFG16Q99234 619 aa1.12□□□□□ -2.23
VAM6YDL077C TDH1P00360 332 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C RPS31P05759 152 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C HIS3P06633 220 aa1.11□□□□□ -2.23
VAM6YDL077C SES1P07284 462 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C MTF2P10849 440 aa1.11□□□□□ -2.23
VAM6YDL077C STE12P13574 688 aa1.11□□□□□ -2.23
VAM6YDL077C CHS2P14180 963 aa1.11□□□□□ -2.23
VAM6YDL077C KAR2P16474 682 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C GLK1P17709 500 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C EXO70P19658 623 aa1.11□□□□□ -2.23
VAM6YDL077C NAR1P23503 491 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C PRP22P24384 1145 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C RPC19P28000 142 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C CHS3P29465 1165 aa1.11□□□□□ -2.23
VAM6YDL077C PYC2P32327 1180 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C PLC1P32383 869 aa1.11□□□□□ -2.23
VAM6YDL077C RPT5P33297 434 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C CLG1P35190 452 aa1.11□□□□□ -2.23
VAM6YDL077C RMA1P36001 430 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C CAF4P36130 643 aa1.11□□□□□ -2.23
VAM6YDL077C GLG1P36143 616 aa1.11□□□□□ -2.23
VAM6YDL077C TRZ1P36159 838 aaPredicted RBP1.11□□□□□ -2.23
VAM6YDL077C NOP4P37838 685 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C ADE17P38009 592 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C MAL33P38157 468 aa1.11□□□□□ -2.23
VAM6YDL077C CST26P38226 397 aa1.11□□□□□ -2.23
VAM6YDL077C YHR131CP38835 850 aa1.11□□□□□ -2.23
VAM6YDL077C MTG2P38860 518 aa1.11□□□□□ -2.23
VAM6YDL077C ATG7P38862 630 aa1.11□□□□□ -2.23
VAM6YDL077C GID8P40208 455 aa1.11□□□□□ -2.23
VAM6YDL077C HXT9P40885 567 aa1.11□□□□□ -2.23
VAM6YDL077C VTC2P43585 828 aa1.11□□□□□ -2.23
VAM6YDL077C FYV8P46949 817 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C NMD5P46970 1048 aa1.11□□□□□ -2.23
VAM6YDL077C YJL181WP46987 611 aa1.11□□□□□ -2.23
VAM6YDL077C NUT1P53114 1132 aa1.11□□□□□ -2.23
VAM6YDL077C GET1P53192 235 aa1.11□□□□□ -2.23
VAM6YDL077C SOK2P53438 785 aaPredicted RBP1.11□□□□□ -2.23
VAM6YDL077C TEP1P53916 434 aa1.11□□□□□ -2.23
VAM6YDL077C SLT2Q00772 484 aa1.11□□□□□ -2.23
VAM6YDL077C KAP120Q02932 1032 aa1.11□□□□□ -2.23
VAM6YDL077C ERO1Q03103 563 aa1.11□□□□□ -2.23
VAM6YDL077C GCN5Q03330 439 aa1.11□□□□□ -2.23
VAM6YDL077C WAR1Q03631 944 aa1.11□□□□□ -2.23
VAM6YDL077C USA1Q03714 838 aa1.11□□□□□ -2.23
VAM6YDL077C TAF12Q03761 539 aa1.11□□□□□ -2.23
VAM6YDL077C RAD30Q04049 632 aa1.11□□□□□ -2.23
VAM6YDL077C SHE9Q04172 456 aa1.11□□□□□ -2.23
VAM6YDL077C MGR3Q04472 501 aa1.11□□□□□ -2.23
VAM6YDL077C GAD1Q04792 585 aa1.11□□□□□ -2.23
VAM6YDL077C GFD1Q04839 188 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C COX20Q04935 205 aa1.11□□□□□ -2.23
VAM6YDL077C DON1Q05610 365 aa1.11□□□□□ -2.23
VAM6YDL077C MCP2Q06567 569 aa1.11□□□□□ -2.23
VAM6YDL077C YDL121CQ07541 149 aa1.11□□□□□ -2.23
VAM6YDL077C GAS5Q08193 484 aa1.11□□□□□ -2.23
VAM6YDL077C NOP12Q08208 459 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C FRE5Q08908 694 aa1.11□□□□□ -2.23
VAM6YDL077C RTT10Q08924 1013 aa1.11□□□□□ -2.23
VAM6YDL077C AKR2Q12013 749 aa1.11□□□□□ -2.23
VAM6YDL077C CDC53Q12018 815 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C TAH18Q12181 623 aa1.11□□□□□ -2.23
VAM6YDL077C RTR2Q12378 196 aa1.11□□□□□ -2.23
VAM6YDL077C RRP36Q12481 300 aaPredicted RBP1.11□□□□□ -2.23
VAM6YDL077C YOL098CQ12496 1037 aa1.11□□□□□ -2.23
VAM6YDL077C CYT1P07143 309 aa1.11□□□□□ -2.23
VAM6YDL077C GCD1P09032 578 aaPredicted RBP1.11□□□□□ -2.23
VAM6YDL077C HNM1P19807 563 aa1.11□□□□□ -2.23
VAM6YDL077C DBP5P20449 482 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C ISY1P21374 235 aaPredicted RBP1.11□□□□□ -2.23
VAM6YDL077C ARG1P22768 420 aa1.11□□□□□ -2.23
VAM6YDL077C MBR1P23493 339 aa1.11□□□□□ -2.23
VAM6YDL077C YSP3P25036 478 aa1.11□□□□□ -2.23
VAM6YDL077C RRP43P25359 394 aaPredicted RBP1.11□□□□□ -2.23
VAM6YDL077C ILV6P25605 309 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C ITR1P30605 584 aa1.11□□□□□ -2.23
VAM6YDL077C SEC1P30619 724 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C CRM1P30822 1084 aaKnown RBP1.11□□□□□ -2.23
VAM6YDL077C PMT2P31382 759 aa1.11□□□□□ -2.23
VAM6YDL077C TFC1P32367 649 aa1.11□□□□□ -2.23
VAM6YDL077C MVD1P32377 396 aaKnown RBP1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 107.8 ms