RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W TWF1P53250 332 aa2.1□□□□□ -2.07
USO1YDL058W TOF1P53840 1238 aa2.1□□□□□ -2.07
USO1YDL058W EFM6P53970 246 aa2.1□□□□□ -2.07
USO1YDL058W ASI1P54074 624 aa2.1□□□□□ -2.07
USO1YDL058W MTD1Q02046 320 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W ELC1Q03071 99 aa2.1□□□□□ -2.07
USO1YDL058W GRX3Q03835 250 aa2.1□□□□□ -2.07
USO1YDL058W YDR131CQ03899 556 aa2.1□□□□□ -2.07
USO1YDL058W YLR326WQ06170 240 aaKnown RBP2.1□□□□□ -2.07
USO1YDL058W YLR031WQ07978 186 aa2.1□□□□□ -2.07
USO1YDL058W GSH2Q08220 491 aa2.1□□□□□ -2.07
USO1YDL058W TGL5Q12043 749 aa2.1□□□□□ -2.07
USO1YDL058W YOR019WQ99248 730 aa2.1□□□□□ -2.07
USO1YDL058W PRC1P00729 532 aa2.09□□□□□ -2.07
USO1YDL058W ERG20P08524 352 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W RPO26P20435 155 aa2.09□□□□□ -2.07
USO1YDL058W PDR3P33200 976 aa2.09□□□□□ -2.07
USO1YDL058W DRE2P36152 348 aa2.09□□□□□ -2.07
USO1YDL058W CDS1P38221 457 aa2.09□□□□□ -2.07
USO1YDL058W MPT5P39016 859 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
USO1YDL058W GIM4P40005 111 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W YFR006WP43590 535 aa2.09□□□□□ -2.07
USO1YDL058W IRC5P43610 853 aa2.09□□□□□ -2.07
USO1YDL058W PAC10P48363 199 aa2.09□□□□□ -2.07
USO1YDL058W GET1P53192 235 aa2.09□□□□□ -2.07
USO1YDL058W YML131WQ03102 365 aa2.09□□□□□ -2.07
USO1YDL058W PKR1Q03880 122 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W RVB1Q03940 463 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W HPT1Q04178 221 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W YML082WQ04533 649 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W PHM6Q05637 104 aa2.09□□□□□ -2.07
USO1YDL058W NKP2Q06162 153 aa2.09□□□□□ -2.07
USO1YDL058W YPR091CQ06833 770 aa2.09□□□□□ -2.07
USO1YDL058W YOR223WQ12015 292 aa2.09□□□□□ -2.07
USO1YDL058W LYS21Q12122 440 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W YLR050CQ12155 161 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W MNL2Q12205 849 aa2.09□□□□□ -2.07
USO1YDL058W TAF3Q12297 353 aa2.09□□□□□ -2.07
USO1YDL058W TFB5Q3E7C1 72 aaPredicted RBP2.09□□□□□ -2.07
USO1YDL058W YOR304C-AO14468 76 aa2.09□□□□□ -2.07
USO1YDL058W FLP1P03870 423 aa2.09□□□□□ -2.07
USO1YDL058W ENA1P13587 1091 aa2.09□□□□□ -2.07
USO1YDL058W CHS2P14180 963 aa2.09□□□□□ -2.07
USO1YDL058W VMA1P17255 1071 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W PAP1P29468 568 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W GPI10P30777 616 aa2.09□□□□□ -2.07
USO1YDL058W HOM6P31116 359 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W TPS2P31688 896 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W CTF13P35203 478 aa2.09□□□□□ -2.07
USO1YDL058W LRG1P35688 1017 aa2.09□□□□□ -2.07
USO1YDL058W PET10P36139 283 aa2.09□□□□□ -2.07
USO1YDL058W POL12P38121 705 aaPredicted RBP2.09□□□□□ -2.07
USO1YDL058W PEX28P38848 579 aa2.09□□□□□ -2.07
USO1YDL058W PES4P39684 611 aa2.09□□□□□ -2.07
USO1YDL058W CIN1P40987 1014 aa2.09□□□□□ -2.07
USO1YDL058W GLC8P41818 229 aa2.09□□□□□ -2.07
USO1YDL058W YNR029CP53729 429 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W CEG1Q01159 459 aaPredicted RBP2.09□□□□□ -2.07
USO1YDL058W ENA2Q01896 1091 aa2.09□□□□□ -2.07
USO1YDL058W UFO1Q04511 668 aa2.09□□□□□ -2.07
USO1YDL058W CHS5Q12114 671 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W RIO1Q12196 484 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W YCT1Q12235 531 aa2.09□□□□□ -2.07
USO1YDL058W ENA5Q12691 1091 aa2.09□□□□□ -2.07
USO1YDL058W ISN1Q99312 450 aa2.09□□□□□ -2.07
USO1YDL058W YMR084WA2P2R3 262 aa2.09□□□□□ -2.07
USO1YDL058W DST1P07273 309 aa2.09□□□□□ -2.07
USO1YDL058W GPA1P08539 472 aa2.09□□□□□ -2.07
USO1YDL058W RPC31P17890 251 aa2.09□□□□□ -2.07
USO1YDL058W YAP1P19880 650 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W SGF29P25554 259 aa2.09□□□□□ -2.07
USO1YDL058W EMC1P25574 760 aa2.09□□□□□ -2.07
USO1YDL058W NAM7P30771 971 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W NUP2P32499 720 aa2.09□□□□□ -2.07
USO1YDL058W YPT7P32939 208 aa2.09□□□□□ -2.07
USO1YDL058W YGL015CP33199 130 aa2.09□□□□□ -2.07
USO1YDL058W APT2P36973 181 aa2.09□□□□□ -2.07
USO1YDL058W CCT4P39078 528 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W VAB2P40003 282 aa2.09□□□□□ -2.07
USO1YDL058W FTR1P40088 404 aa2.09□□□□□ -2.07
USO1YDL058W VMA13P41807 478 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W SSN8P47821 323 aa2.09□□□□□ -2.07
USO1YDL058W NIT3P49954 291 aa2.09□□□□□ -2.07
USO1YDL058W YNL260CP53846 198 aa2.09□□□□□ -2.07
USO1YDL058W NUP49Q02199 472 aa2.09□□□□□ -2.07
USO1YDL058W YDR514CQ04408 483 aa2.09□□□□□ -2.07
USO1YDL058W CNL1Q06333 122 aa2.09□□□□□ -2.07
USO1YDL058W OPT2Q06593 877 aa2.09□□□□□ -2.07
USO1YDL058W VAM6Q07468 1049 aa2.09□□□□□ -2.07
USO1YDL058W CRT10Q08226 957 aa2.09□□□□□ -2.07
USO1YDL058W ISU2Q12056 156 aa2.09□□□□□ -2.07
USO1YDL058W APC2Q12440 853 aa2.09□□□□□ -2.07
USO1YDL058W ERG27Q12452 347 aaKnown RBP2.09□□□□□ -2.07
USO1YDL058W INH1P01097 85 aa2.09□□□□□ -2.08
USO1YDL058W CPA2P03965 1118 aaKnown RBP2.09□□□□□ -2.08
USO1YDL058W ILV2P07342 687 aaKnown RBP2.09□□□□□ -2.08
USO1YDL058W DIT2P21595 489 aa2.09□□□□□ -2.08
USO1YDL058W CWH43P25618 953 aa2.09□□□□□ -2.08
USO1YDL058W HMX1P32339 317 aa2.09□□□□□ -2.08
USO1YDL058W PRP21P32524 280 aaPredicted RBP2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms