RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 PSF2P40359 213 aa9.46□□□□□ -0.9
NME1NME1 IDS2P46958 469 aa9.46□□□□□ -0.9
NME1NME1 TIM44Q01852 431 aa9.46□□□□□ -0.9
NME1NME1 HBT1Q07653 1046 aaKnown RBP9.46□□□□□ -0.9
NME1NME1 PUS9Q12069 462 aa9.46□□□□□ -0.9
NME1NME1 ADE3P07245 946 aaKnown RBP9.45□□□□□ -0.9
NME1NME1 VPS34P22543 875 aa9.45□□□□□ -0.9
NME1NME1 SWI4P25302 1093 aaKnown RBP9.45□□□□□ -0.9
NME1NME1 COS12P53053 380 aa9.45□□□□□ -0.9
NME1NME1 DAK1P54838 584 aaKnown RBP9.45□□□□□ -0.9
NME1NME1 BMS1Q08965 1183 aaKnown RBP9.45□□□□□ -0.9
NME1NME1 MTF2P10849 440 aa9.44□□□□□ -0.9
NME1NME1 NCP1P16603 691 aaKnown RBP9.44□□□□□ -0.9
NME1NME1 BET2P20133 325 aa9.44□□□□□ -0.9
NME1NME1 VID27P40157 782 aa9.44□□□□□ -0.9
NME1NME1 SNF12P53628 566 aa9.44□□□□□ -0.9
NME1NME1 MUK1Q02866 612 aa9.44□□□□□ -0.9
NME1NME1 ATG21Q02887 496 aa9.44□□□□□ -0.9
NME1NME1 RAD26P40352 1085 aa9.43□□□□□ -0.9
NME1NME1 IMA1P53051 589 aa9.43□□□□□ -0.9
NME1NME1 SVL3Q03088 825 aaKnown RBP9.43□□□□□ -0.9
NME1NME1 SSP2Q08646 371 aa9.43□□□□□ -0.9
NME1NME1 YPL216WQ08964 1102 aa9.43□□□□□ -0.9
NME1NME1 GMH1P36125 273 aa9.42□□□□□ -0.9
NME1NME1 GLG1P36143 616 aa9.42□□□□□ -0.9
NME1NME1 YBR138CP38277 524 aa9.42□□□□□ -0.9
NME1NME1 LAM4P38800 1345 aa9.41□□□□□ -0.9
NME1NME1 UBC1P21734 215 aaKnown RBP9.41□□□□□ -0.9
NME1NME1 PRE2P30656 287 aaKnown RBP9.41□□□□□ -0.9
NME1NME1 NPR3P38742 1146 aa9.41□□□□□ -0.9
NME1NME1 AIM6Q07716 390 aa9.41□□□□□ -0.9
NME1NME1 FSH1P38777 243 aaKnown RBP9.4□□□□□ -0.9
NME1NME1 CHS7P38843 316 aa9.4□□□□□ -0.9
NME1NME1 YIP4P53093 235 aa9.4□□□□□ -0.9
NME1NME1 ARP2P32381 391 aaKnown RBP9.39□□□□□ -0.91
NME1NME1 BDH2P39713 417 aa9.39□□□□□ -0.91
NME1NME1 SPC98P53540 846 aa9.39□□□□□ -0.91
NME1NME1 YPL108WQ02872 168 aaPredicted RBP9.39□□□□□ -0.91
NME1NME1 ICL2Q12031 575 aa9.39□□□□□ -0.91
NME1NME1 PMT6P42934 759 aa9.38□□□□□ -0.91
NME1NME1 STB4P50104 949 aa9.38□□□□□ -0.91
NME1NME1 BUD17P53727 317 aa9.38□□□□□ -0.91
NME1NME1 TRS23Q03784 219 aa9.38□□□□□ -0.91
NME1NME1 YMR018WQ04364 514 aa9.38□□□□□ -0.91
NME1NME1 GSF2Q04697 403 aaKnown RBP9.38□□□□□ -0.91
NME1NME1 BIK1P11709 440 aa9.37□□□□□ -0.91
NME1NME1 SWC3P31376 625 aa9.37□□□□□ -0.91
NME1NME1 LOT5P34234 306 aa9.37□□□□□ -0.91
NME1NME1 CCL1P37366 393 aa9.37□□□□□ -0.91
NME1NME1 KAP123P40069 1113 aaKnown RBP9.37□□□□□ -0.91
NME1NME1 ESF2P53743 316 aaKnown RBP9.37□□□□□ -0.91
NME1NME1 NGL2Q03264 515 aaKnown RBP9.37□□□□□ -0.91
NME1NME1 USA1Q03714 838 aa9.37□□□□□ -0.91
NME1NME1 TMA64Q04600 565 aaKnown RBP9.37□□□□□ -0.91
NME1NME1 CSR1Q06705 408 aaKnown RBP9.37□□□□□ -0.91
NME1NME1 OPY2Q06810 360 aa9.37□□□□□ -0.91
NME1NME1 TGS1Q12052 315 aa9.37□□□□□ -0.91
NME1NME1 RER1P25560 188 aa9.36□□□□□ -0.91
NME1NME1 CNE1P27825 502 aa9.36□□□□□ -0.91
NME1NME1 RAD16P31244 790 aa9.36□□□□□ -0.91
NME1NME1 RPT3P33298 428 aaKnown RBP9.36□□□□□ -0.91
NME1NME1 SLC1P33333 303 aa9.36□□□□□ -0.91
NME1NME1 UBS1P38290 277 aa9.36□□□□□ -0.91
NME1NME1 PIH1P38768 344 aa9.36□□□□□ -0.91
NME1NME1 YJL206CP39529 758 aa9.36□□□□□ -0.91
NME1NME1 NEW1Q08972 1196 aaKnown RBP9.36□□□□□ -0.91
NME1NME1 STE4P18851 423 aa9.35□□□□□ -0.91
NME1NME1 RRN3P36070 627 aa9.35□□□□□ -0.91
NME1NME1 SDH8P38345 138 aa9.35□□□□□ -0.91
NME1NME1 UME6P39001 836 aa9.35□□□□□ -0.91
NME1NME1 ARB1P40024 610 aaKnown RBP9.35□□□□□ -0.91
NME1NME1 BST1P43571 1029 aa9.35□□□□□ -0.91
NME1NME1 SAP4P53036 818 aa9.35□□□□□ -0.91
NME1NME1 YDR179W-AQ03983 463 aa9.35□□□□□ -0.91
NME1NME1 PFK2P16862 959 aaKnown RBP RIP-Chip data9.34□□□□□ -0.91not detected
NME1NME1 YCR061WP25639 631 aa9.34□□□□□ -0.91
NME1NME1 IFA38P38286 347 aa9.34□□□□□ -0.91
NME1NME1 RPS15Q01855 142 aaKnown RBP9.34□□□□□ -0.91
NME1NME1 YDL073WQ07454 984 aa9.34□□□□□ -0.91
NME1NME1 PET122P10355 254 aa9.33□□□□□ -0.92
NME1NME1 LNP1P38878 278 aa9.33□□□□□ -0.92
NME1NME1 CTF18P49956 741 aa9.33□□□□□ -0.92
NME1NME1 CRF1Q04930 467 aa9.33□□□□□ -0.92
NME1NME1 CDC43P18898 376 aa9.32□□□□□ -0.92
NME1NME1 GCD7P32502 381 aaPredicted RBP9.32□□□□□ -0.92
NME1NME1 SDS3P40505 327 aa9.32□□□□□ -0.92
NME1NME1 CTF4Q01454 927 aa9.32□□□□□ -0.92
NME1NME1 VID22Q05934 901 aa9.32□□□□□ -0.92
NME1NME1 TAF3Q12297 353 aa9.32□□□□□ -0.92
NME1NME1 MDM20Q12387 796 aaKnown RBP9.32□□□□□ -0.92
NME1NME1 SNF1P06782 633 aaKnown RBP9.31□□□□□ -0.92
NME1NME1 KIN3P22209 435 aa9.31□□□□□ -0.92
NME1NME1 MCM10P32354 571 aa9.31□□□□□ -0.92
NME1NME1 OAR1P35731 278 aa9.31□□□□□ -0.92
NME1NME1 SKP2P42843 763 aa9.31□□□□□ -0.92
NME1NME1 CCT7P42943 550 aaKnown RBP9.31□□□□□ -0.92
NME1NME1 BNA1P47096 177 aa9.31□□□□□ -0.92
NME1NME1 SUL2Q12325 893 aa9.31□□□□□ -0.92
NME1NME1 LEU2P04173 364 aaPredicted RBP9.3□□□□□ -0.92
NME1NME1 DMC1P25453 334 aa9.3□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms