RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Npc1l1Q6T3U4 1333 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Pde4aO89084 844 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Ca8P28651 291 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Ppfibp1Q8C8U0 969 aaKnown RBP16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Ccdc89Q9DA73 370 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Eddm13E9Q7F5 164 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 XpcP51612 930 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Eya3P97480 510 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Pdcl2Q78Y63 240 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Ccnt1Q9QWV9 724 aaKnown RBP16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Tldc2A2ACG1 198 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Gpr162Q3UN16 588 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Arid3aQ62431 601 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Mettl5Q8K1A0 209 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Ubac1Q8VDI7 409 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Nxf1Q99JX7 618 aaKnown RBP16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Ciao1Q99KN2 339 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Oas2E9Q9A9 742 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 PparaP23204 468 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Sap30bpQ02614 308 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Smarcad1Q04692 1021 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Lin9Q8C735 542 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Vmn1r199Q8R280 367 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Yeats4Q9CR11 227 aaKnown RBP16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Tubb4aQ9D6F9 444 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Rnf17Q99MV7 1640 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Ctnna3Q65CL1 895 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Slc18a1Q8R090 521 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Prr5lA2AVJ5 370 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 FanccP50652 591 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Trim52Q8CDV4 233 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Nid2O88322 1403 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 OscarQ8VBT3 265 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Ccdc94Q9D6J3 314 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Kcnh3Q9WVJ0 1095 aa16■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Znf219Q6IQX8 726 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Ano6Q6P9J9 911 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Depdc1bQ8BH88 529 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Acot11Q8VHQ9 594 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Tnpo2Q99LG2 887 aaKnown RBP15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 FliiQ9JJ28 1271 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Med14A2ABV5 1459 aaKnown RBP15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Capza3P70190 299 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Kdm4cQ8VCD7 1054 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Tab2Q99K90 693 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Prkg1P0C605 671 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Senp1P59110 640 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Fam177a1Q8BR63 207 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Abcb4P21440 1276 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Smim5Q8BT42 78 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Gimap7Q8R379 293 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Plcd1Q8R3B1 756 aa15.99■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Tmem2Q5FWI3 1383 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Ccdc170D3YXL0 722 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 PpardP35396 440 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Oxr1Q4KMM3 866 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Rhpn1Q61085 643 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Nacc1Q7TSZ8 514 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Prune1Q8BIW1 454 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Pcdhb2Q91Y00 799 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Ube3aO08759 870 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Dcaf17Q3TUL7 519 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Capn12Q9ER56 720 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Myo3aQ8K3H5 1613 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Unc13aQ4KUS2 1712 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Dnmt1P13864 1620 aaKnown RBP15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Kdm6bQ5NCY0 1641 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Emilin1Q99K41 1017 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Fbxo3Q9DC63 480 aa15.98■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Tpd52l2Q9CYZ2 220 aaKnown RBP15.97■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Arglu1Q3UL36 271 aaKnown RBP15.97■□□□□ 0.15
Col2a1-202ENSMUST00000088355 HelbQ6NVF4 1074 aa15.97■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Kiaa1107Q80TK0 1369 aa15.97■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Gm28919A0A087WP35 240 aa15.97■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Vps33bP59016 617 aa15.97■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Mcm6P97311 821 aa15.97■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Hip1rQ9JKY5 1068 aa15.97■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Gm5934D3Z4U6 212 aa15.97■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Zfp213E9QAW0 468 aa15.97■□□□□ 0.15
Col2a1-202ENSMUST00000088355 HibadhQ99L13 335 aaKnown RBP15.97■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Tulp4Q9JIL5 1547 aa15.97■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Psmc2P46471 433 aa15.96■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Rapgef1Q3UHC1 1224 aa15.96■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Asic3Q6X1Y6 530 aa15.96■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Tlr7P58681 1050 aa15.96■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Ccdc129Q14B48 1034 aa15.96■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Asap2Q7SIG6 958 aa15.96■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Rexo1Q7TT28 1213 aa15.96■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Sgsm1Q8BPQ7 1093 aa15.96■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Polr2dQ9D7M8 142 aaKnown RBP15.96■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Fam178bQ24JP3 464 aa15.96■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Als2cr12Q8BVM7 383 aa15.96■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Tmx3Q8BXZ1 456 aa15.96■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Mtmr7Q9Z2C9 660 aa15.96■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Erbb3Q61526 1339 aa15.96■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Krt18P05784 423 aa15.96■□□□□ 0.14
Col2a1-202ENSMUST00000088355 Fam107bQ3TGF2 131 aa15.96■□□□□ 0.14
Col2a1-202ENSMUST00000088355 Zswim4Q8C7B8 1101 aa15.96■□□□□ 0.14
Col2a1-202ENSMUST00000088355 Pde5aQ8CG03 865 aa15.96■□□□□ 0.14
Col2a1-202ENSMUST00000088355 Amhr2Q8K592 568 aa15.96■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms