Protein–RNA interactions for Protein: Q8R280

Vmn1r199, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r199Q8R280 Gm25239-201ENSMUST00000174915 86 ntBASIC45,73■■■■■ 4,91
Vmn1r199Q8R280 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42,46■■■■■ 4,39
Vmn1r199Q8R280 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41,83■■■■■ 4,29
Vmn1r199Q8R280 Gm24109-201ENSMUST00000175489 103 ntBASIC39,81■■■■□ 3,96
Vmn1r199Q8R280 Gm15042-201ENSMUST00000120212 883 ntBASIC39,63■■■■□ 3,93
Vmn1r199Q8R280 Gm15045-201ENSMUST00000117359 883 ntBASIC38,65■■■■□ 3,78
Vmn1r199Q8R280 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38,62■■■■□ 3,77
Vmn1r199Q8R280 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38,61■■■■□ 3,77
Vmn1r199Q8R280 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38,57■■■■□ 3,76
Vmn1r199Q8R280 Gm23366-201ENSMUST00000175022 89 ntBASIC38,15■■■■□ 3,7
Vmn1r199Q8R280 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37,95■■■■□ 3,67
Vmn1r199Q8R280 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37,35■■■■□ 3,57
Vmn1r199Q8R280 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37,26■■■■□ 3,56
Vmn1r199Q8R280 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36,99■■■■□ 3,51
Vmn1r199Q8R280 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36,94■■■■□ 3,5
Vmn1r199Q8R280 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36,92■■■■□ 3,5
Vmn1r199Q8R280 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36,92■■■■□ 3,5
Vmn1r199Q8R280 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36,76■■■■□ 3,48
Vmn1r199Q8R280 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36,66■■■■□ 3,46
Vmn1r199Q8R280 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36,54■■■■□ 3,44
Vmn1r199Q8R280 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36,35■■■■□ 3,41
Vmn1r199Q8R280 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36,25■■■■□ 3,39
Vmn1r199Q8R280 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36,23■■■■□ 3,39
Vmn1r199Q8R280 Gm25238-201ENSMUST00000174914 89 ntBASIC36,19■■■■□ 3,38
Vmn1r199Q8R280 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36,18■■■■□ 3,38
Vmn1r199Q8R280 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36,14■■■■□ 3,38
Vmn1r199Q8R280 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35,89■■■■□ 3,34
Vmn1r199Q8R280 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35,83■■■■□ 3,33
Vmn1r199Q8R280 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35,77■■■■□ 3,32
Vmn1r199Q8R280 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35,68■■■■□ 3,3
Vmn1r199Q8R280 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35,54■■■■□ 3,28
Vmn1r199Q8R280 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35,46■■■■□ 3,27
Vmn1r199Q8R280 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35,45■■■■□ 3,27
Vmn1r199Q8R280 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35,33■■■■□ 3,25
Vmn1r199Q8R280 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35,17■■■■□ 3,22
Vmn1r199Q8R280 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35,09■■■■□ 3,21
Vmn1r199Q8R280 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35,08■■■■□ 3,21
Vmn1r199Q8R280 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34,98■■■■□ 3,19
Vmn1r199Q8R280 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34,97■■■■□ 3,19
Vmn1r199Q8R280 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34,9■■■■□ 3,18
Vmn1r199Q8R280 Gm25262-201ENSMUST00000174934 133 ntBASIC34,87■■■■□ 3,17
Vmn1r199Q8R280 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34,74■■■■□ 3,15
Vmn1r199Q8R280 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34,72■■■■□ 3,15
Vmn1r199Q8R280 Gm27325-201ENSMUST00000175467 74 ntBASIC34,64■■■■□ 3,14
Vmn1r199Q8R280 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34,64■■■■□ 3,14
Vmn1r199Q8R280 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34,4■■■■□ 3,1
Vmn1r199Q8R280 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34,39■■■■□ 3,1
Vmn1r199Q8R280 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34,37■■■■□ 3,09
Vmn1r199Q8R280 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34,3■■■■□ 3,08
Vmn1r199Q8R280 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34,27■■■■□ 3,08
Vmn1r199Q8R280 Rab21-202ENSMUST00000218831 843 ntBASIC34,25■■■■□ 3,07
Vmn1r199Q8R280 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34,21■■■■□ 3,07
Vmn1r199Q8R280 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34,15■■■■□ 3,06
Vmn1r199Q8R280 Gm26115-201ENSMUST00000175605 87 ntBASIC34,15■■■■□ 3,06
Vmn1r199Q8R280 Psd-208ENSMUST00000224556 2034 ntBASIC34,11■■■■□ 3,05
Vmn1r199Q8R280 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34,11■■■■□ 3,05
Vmn1r199Q8R280 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34,05■■■■□ 3,04
Vmn1r199Q8R280 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC34■■■■□ 3,03
Vmn1r199Q8R280 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33,99■■■■□ 3,03
Vmn1r199Q8R280 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33,95■■■■□ 3,03
Vmn1r199Q8R280 Gm8109-201ENSMUST00000194076 746 ntBASIC33,92■■■■□ 3,02
Vmn1r199Q8R280 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33,9■■■■□ 3,02
Vmn1r199Q8R280 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33,9■■■■□ 3,02
Vmn1r199Q8R280 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33,88■■■■□ 3,01
Vmn1r199Q8R280 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33,79■■■■□ 3
Vmn1r199Q8R280 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33,78■■■■□ 3
Vmn1r199Q8R280 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33,74■■■□□ 2,99
Vmn1r199Q8R280 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33,57■■■□□ 2,97
Vmn1r199Q8R280 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33,57■■■□□ 2,96
Vmn1r199Q8R280 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33,56■■■□□ 2,96
Vmn1r199Q8R280 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33,53■■■□□ 2,96
Vmn1r199Q8R280 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33,52■■■□□ 2,96
Vmn1r199Q8R280 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33,5■■■□□ 2,95
Vmn1r199Q8R280 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33,5■■■□□ 2,95
Vmn1r199Q8R280 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33,41■■■□□ 2,94
Vmn1r199Q8R280 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33,41■■■□□ 2,94
Vmn1r199Q8R280 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33,36■■■□□ 2,93
Vmn1r199Q8R280 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33,35■■■□□ 2,93
Vmn1r199Q8R280 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33,35■■■□□ 2,93
Vmn1r199Q8R280 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33,3■■■□□ 2,92
Vmn1r199Q8R280 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33,24■■■□□ 2,91
Vmn1r199Q8R280 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33,16■■■□□ 2,9
Vmn1r199Q8R280 Gm17082-201ENSMUST00000166043 1091 ntBASIC33,08■■■□□ 2,89
Vmn1r199Q8R280 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33,06■■■□□ 2,88
Vmn1r199Q8R280 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33,06■■■□□ 2,88
Vmn1r199Q8R280 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33,05■■■□□ 2,88
Vmn1r199Q8R280 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33,04■■■□□ 2,88
Vmn1r199Q8R280 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33,01■■■□□ 2,87
Vmn1r199Q8R280 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2,87
Vmn1r199Q8R280 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32,97■■■□□ 2,87
Vmn1r199Q8R280 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32,96■■■□□ 2,87
Vmn1r199Q8R280 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32,93■■■□□ 2,86
Vmn1r199Q8R280 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32,92■■■□□ 2,86
Vmn1r199Q8R280 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32,9■■■□□ 2,86
Vmn1r199Q8R280 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32,86■■■□□ 2,85
Vmn1r199Q8R280 Gm27322-201ENSMUST00000184007 104 ntBASIC32,82■■■□□ 2,84
Vmn1r199Q8R280 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32,81■■■□□ 2,84
Vmn1r199Q8R280 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32,8■■■□□ 2,84
Vmn1r199Q8R280 Gm24804-201ENSMUST00000174982 85 ntBASIC32,76■■■□□ 2,83
Vmn1r199Q8R280 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32,75■■■□□ 2,83
Retrieved 100 of 76,532 protein–RNA pairs in 11,7 ms