Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Gm25239-201ENSMUST00000174915 86 ntBASIC40.73■■■■■ 4.11
Lin9Q8C735 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
Lin9Q8C735 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
Lin9Q8C735 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
Lin9Q8C735 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Lin9Q8C735 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.7■■■■□ 3.31
Lin9Q8C735 Gm15042-201ENSMUST00000120212 883 ntBASIC35.51■■■■□ 3.28
Lin9Q8C735 Gm24109-201ENSMUST00000175489 103 ntBASIC35.34■■■■□ 3.25
Lin9Q8C735 Gm15045-201ENSMUST00000117359 883 ntBASIC34.63■■■■□ 3.13
Lin9Q8C735 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Lin9Q8C735 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.38■■■■□ 3.09
Lin9Q8C735 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Lin9Q8C735 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Lin9Q8C735 Psd-208ENSMUST00000224556 2034 ntBASIC34.3■■■■□ 3.08
Lin9Q8C735 Gm23366-201ENSMUST00000175022 89 ntBASIC34.05■■■■□ 3.04
Lin9Q8C735 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Lin9Q8C735 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.77■■■■□ 3
Lin9Q8C735 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.67■■■□□ 2.98
Lin9Q8C735 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Lin9Q8C735 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Lin9Q8C735 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Lin9Q8C735 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Lin9Q8C735 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
Lin9Q8C735 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
Lin9Q8C735 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33■■■□□ 2.87
Lin9Q8C735 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Lin9Q8C735 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
Lin9Q8C735 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Lin9Q8C735 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
Lin9Q8C735 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Lin9Q8C735 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
Lin9Q8C735 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.76■■■□□ 2.84
Lin9Q8C735 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.74■■■□□ 2.83
Lin9Q8C735 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.71■■■□□ 2.83
Lin9Q8C735 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Lin9Q8C735 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Lin9Q8C735 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Lin9Q8C735 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.45■■■□□ 2.79
Lin9Q8C735 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Lin9Q8C735 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Lin9Q8C735 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Lin9Q8C735 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Lin9Q8C735 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Lin9Q8C735 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.24■■■□□ 2.75
Lin9Q8C735 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Lin9Q8C735 Gm25238-201ENSMUST00000174914 89 ntBASIC32.14■■■□□ 2.74
Lin9Q8C735 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Lin9Q8C735 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Lin9Q8C735 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.89■■■□□ 2.7
Lin9Q8C735 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Lin9Q8C735 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Lin9Q8C735 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.6■■■□□ 2.65
Lin9Q8C735 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
Lin9Q8C735 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.59■■■□□ 2.65
Lin9Q8C735 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Lin9Q8C735 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Lin9Q8C735 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Lin9Q8C735 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Lin9Q8C735 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Lin9Q8C735 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.34■■■□□ 2.61
Lin9Q8C735 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Lin9Q8C735 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Lin9Q8C735 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Lin9Q8C735 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.2■■■□□ 2.59
Lin9Q8C735 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
Lin9Q8C735 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Lin9Q8C735 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Lin9Q8C735 Gm27325-201ENSMUST00000175467 74 ntBASIC31.06■■■□□ 2.56
Lin9Q8C735 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31■■■□□ 2.55
Lin9Q8C735 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Lin9Q8C735 Gm25262-201ENSMUST00000174934 133 ntBASIC30.94■■■□□ 2.54
Lin9Q8C735 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Lin9Q8C735 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.92■■■□□ 2.54
Lin9Q8C735 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
Lin9Q8C735 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.81■■■□□ 2.52
Lin9Q8C735 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Lin9Q8C735 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Lin9Q8C735 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.75■■■□□ 2.51
Lin9Q8C735 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.73■■■□□ 2.51
Lin9Q8C735 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Lin9Q8C735 Rab21-202ENSMUST00000218831 843 ntBASIC30.62■■■□□ 2.49
Lin9Q8C735 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Lin9Q8C735 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.59■■■□□ 2.49
Lin9Q8C735 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.56■■■□□ 2.48
Lin9Q8C735 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Lin9Q8C735 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Lin9Q8C735 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.45■■■□□ 2.47
Lin9Q8C735 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Lin9Q8C735 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Lin9Q8C735 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.38■■■□□ 2.45
Lin9Q8C735 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Lin9Q8C735 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Lin9Q8C735 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Lin9Q8C735 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Lin9Q8C735 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
Lin9Q8C735 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Lin9Q8C735 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
Lin9Q8C735 Gm26115-201ENSMUST00000175605 87 ntBASIC30.22■■■□□ 2.43
Lin9Q8C735 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Lin9Q8C735 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms