RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeastyeast

Gene UBA3, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA3YPR066W UBP9P39967 754 aa8.93□□□□□ -0.98
UBA3YPR066W KIN1P13185 1064 aa8.92□□□□□ -0.98
UBA3YPR066W HIR3P47171 1648 aa8.91□□□□□ -0.98
UBA3YPR066W IES2P40154 320 aa8.91□□□□□ -0.98
UBA3YPR066W DIT2P21595 489 aa8.9□□□□□ -0.98
UBA3YPR066W NUP42P49686 430 aaKnown RBP8.9□□□□□ -0.98
UBA3YPR066W VMA1P17255 1071 aaKnown RBP8.89□□□□□ -0.99
UBA3YPR066W GLC3P32775 704 aa8.89□□□□□ -0.99
UBA3YPR066W ABP1P15891 592 aaKnown RBP8.88□□□□□ -0.99
UBA3YPR066W BUD31P25337 157 aaPredicted RBP8.87□□□□□ -0.99
UBA3YPR066W WSC3Q12215 556 aa8.87□□□□□ -0.99
UBA3YPR066W YBL029C-AQ3E756 94 aa8.87□□□□□ -0.99
UBA3YPR066W SPA2P23201 1466 aaKnown RBP8.86□□□□□ -0.99
UBA3YPR066W COX6P00427 148 aa8.86□□□□□ -0.99
UBA3YPR066W MAK21Q12176 1025 aaKnown RBP8.86□□□□□ -0.99
UBA3YPR066W AIM7Q12156 149 aa8.85□□□□□ -0.99
UBA3YPR066W ECM5Q03214 1411 aa8.81□□□□□ -1
UBA3YPR066W RLF2Q12495 606 aa8.8□□□□□ -1
UBA3YPR066W UBP14P38237 781 aaKnown RBP8.79□□□□□ -1
UBA3YPR066W VNX1P42839 908 aa8.79□□□□□ -1
UBA3YPR066W YDR090CQ03193 310 aa8.79□□□□□ -1
UBA3YPR066W SAM3Q08986 587 aa8.79□□□□□ -1
UBA3YPR066W VHR2P40041 505 aa8.78□□□□□ -1
UBA3YPR066W SET4P42948 560 aa8.78□□□□□ -1
UBA3YPR066W YOL036WQ08206 761 aa8.78□□□□□ -1
UBA3YPR066W GRE2Q12068 342 aaKnown RBP8.76□□□□□ -1.01
UBA3YPR066W GUA1P38625 525 aaKnown RBP8.75□□□□□ -1.01
UBA3YPR066W ATH1P48016 1211 aa8.75□□□□□ -1.01
UBA3YPR066W GUT1P32190 709 aa8.74□□□□□ -1.01
UBA3YPR066W ATF2P53296 535 aa8.74□□□□□ -1.01
UBA3YPR066W YLR326WQ06170 240 aaKnown RBP8.74□□□□□ -1.01
UBA3YPR066W MSB4Q12317 492 aa8.74□□□□□ -1.01
UBA3YPR066W GYP5Q12344 894 aa8.74□□□□□ -1.01
UBA3YPR066W XRN1P22147 1528 aaKnown RBP8.74□□□□□ -1.01
UBA3YPR066W SSN2P38931 1420 aa8.73□□□□□ -1.01
UBA3YPR066W SPP1Q03012 353 aa8.73□□□□□ -1.01
UBA3YPR066W THO2P53552 1597 aaKnown RBP8.73□□□□□ -1.01
UBA3YPR066W BUD4P47136 1447 aa8.72□□□□□ -1.01
UBA3YPR066W YGR273CP53329 174 aa8.71□□□□□ -1.02
UBA3YPR066W SOL3P38858 249 aa8.69□□□□□ -1.02
UBA3YPR066W TIF11P38912 153 aaKnown RBP8.69□□□□□ -1.02
UBA3YPR066W DCW1P36091 449 aa8.68□□□□□ -1.02
UBA3YPR066W PEP1P32319 1579 aa8.66□□□□□ -1.02
UBA3YPR066W EAP1P36041 632 aaKnown RBP8.66□□□□□ -1.02
UBA3YPR066W ULI1P43604 169 aa8.66□□□□□ -1.02
UBA3YPR066W HGH1P48362 394 aaKnown RBP8.66□□□□□ -1.02
UBA3YPR066W MDS3P53094 1487 aa8.65□□□□□ -1.02
UBA3YPR066W KEX1P09620 729 aa8.65□□□□□ -1.02
UBA3YPR066W PCS60P38137 543 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02 RIP-Chip
UBA3YPR066W KIC1P38692 1080 aa8.65□□□□□ -1.02
UBA3YPR066W HPC2Q01448 625 aa8.64□□□□□ -1.03
UBA3YPR066W TRP5P00931 707 aaKnown RBP8.63□□□□□ -1.03
UBA3YPR066W HTA1P04911 132 aaKnown RBP8.63□□□□□ -1.03
UBA3YPR066W HTA2P04912 132 aa8.63□□□□□ -1.03
UBA3YPR066W RAD54P32863 898 aa8.63□□□□□ -1.03
UBA3YPR066W NST1P53935 1240 aa8.61□□□□□ -1.03
UBA3YPR066W PSE1P32337 1089 aaKnown RBP8.6□□□□□ -1.03
UBA3YPR066W ATG2P53855 1592 aa8.6□□□□□ -1.03
UBA3YPR066W REV3P14284 1504 aa8.59□□□□□ -1.03
UBA3YPR066W TFB3Q03290 321 aa8.59□□□□□ -1.03
UBA3YPR066W IOC2Q12072 812 aa8.58□□□□□ -1.04
UBA3YPR066W LDB19Q12502 818 aa8.57□□□□□ -1.04
UBA3YPR066W SIS1P25294 352 aaKnown RBP8.56□□□□□ -1.04
UBA3YPR066W ORC6P38826 435 aa8.56□□□□□ -1.04
UBA3YPR066W YEL023CP39992 682 aa8.55□□□□□ -1.04
UBA3YPR066W ILV3P39522 585 aaKnown RBP8.53□□□□□ -1.04
UBA3YPR066W PKC1P24583 1151 aa8.52□□□□□ -1.05
UBA3YPR066W CSN12P47130 423 aa8.52□□□□□ -1.05
UBA3YPR066W MPH3P0CE00 602 aa8.5□□□□□ -1.05
UBA3YPR066W YNL035CP53962 389 aaKnown RBP8.5□□□□□ -1.05
UBA3YPR066W JIP4Q03361 876 aa8.5□□□□□ -1.05
UBA3YPR066W SIN3P22579 1536 aa8.49□□□□□ -1.05
UBA3YPR066W RTG1P32607 177 aa8.49□□□□□ -1.05
UBA3YPR066W PTC4P38089 393 aa8.49□□□□□ -1.05
UBA3YPR066W BRL1P38770 471 aa8.49□□□□□ -1.05
UBA3YPR066W TEA1P47988 759 aa8.49□□□□□ -1.05
UBA3YPR066W TAF2P23255 1407 aa8.48□□□□□ -1.05
UBA3YPR066W AI4P03878 556 aa8.48□□□□□ -1.05
UBA3YPR066W SSA2P10592 639 aaKnown RBP8.48□□□□□ -1.05
UBA3YPR066W RGR1P19263 1082 aa8.48□□□□□ -1.05
UBA3YPR066W KTR1P27810 393 aaKnown RBP8.48□□□□□ -1.05
UBA3YPR066W MVP1P40959 511 aaKnown RBP8.45□□□□□ -1.06
UBA3YPR066W GAP1P19145 602 aaPredicted RBP8.44□□□□□ -1.06
UBA3YPR066W FKH1P40466 484 aa8.44□□□□□ -1.06
UBA3YPR066W DAN4P47179 1161 aa8.44□□□□□ -1.06
UBA3YPR066W TYW1Q08960 810 aaKnown RBP8.44□□□□□ -1.06
UBA3YPR066W SSK2P53599 1579 aa8.44□□□□□ -1.06
UBA3YPR066W SEC61P32915 480 aa8.43□□□□□ -1.06
UBA3YPR066W SLI15P38283 698 aa8.43□□□□□ -1.06
UBA3YPR066W GLN1P32288 370 aaKnown RBP8.41□□□□□ -1.06
UBA3YPR066W BIM1P40013 344 aa8.41□□□□□ -1.06
UBA3YPR066W NCR1Q12200 1170 aa8.41□□□□□ -1.06
UBA3YPR066W YJL007CP47080 104 aa8.4□□□□□ -1.06
UBA3YPR066W SKI3P17883 1432 aaKnown RBP8.39□□□□□ -1.07
UBA3YPR066W CLB5P30283 435 aa8.39□□□□□ -1.07
UBA3YPR066W TFG1P41895 735 aaPredicted RBP8.39□□□□□ -1.07
UBA3YPR066W NIS1P53939 407 aa8.39□□□□□ -1.07
UBA3YPR066W AIR2Q12476 344 aaKnown RBP8.39□□□□□ -1.07
UBA3YPR066W ATG32P40458 529 aa8.38□□□□□ -1.07
UBA3YPR066W CSC1Q06538 782 aa8.38□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms