RNA–Protein interactions for RNA: YPL137C

GIP3, Transcript of Cytoplasmic protein that regulates protein phosphatase 1 Glc7p, yeast

Gene GIP3, Length 3,831 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GIP3	YPL137C	DOP1	Q03921	1698 aa		3.71	□□□□□ -1.82
GIP3	YPL137C	SNT2	P53127	1403 aa		3.69	□□□□□ -1.82
GIP3	YPL137C	SMC4	Q12267	1418 aa		3.69	□□□□□ -1.82
GIP3	YPL137C	HAP1	P0CE41	1502 aa		3.68	□□□□□ -1.82
GIP3	YPL137C	TAF7	Q05021	590 aa		3.68	□□□□□ -1.82
GIP3	YPL137C	POL1	P13382	1468 aa		3.68	□□□□□ -1.82
GIP3	YPL137C	PDR12	Q02785	1511 aa		3.68	□□□□□ -1.82
GIP3	YPL137C	MLP2	P40457	1679 aa		3.67	□□□□□ -1.82
GIP3	YPL137C	MMS22	Q06164	1454 aa		3.67	□□□□□ -1.82
GIP3	YPL137C	YOR1	P53049	1477 aa		3.66	□□□□□ -1.82
GIP3	YPL137C	CHC1	P22137	1653 aa	Known RBP	3.65	□□□□□ -1.83
GIP3	YPL137C	TRM3	Q07527	1436 aa		3.65	□□□□□ -1.83
GIP3	YPL137C	VPS15	P22219	1454 aa		3.64	□□□□□ -1.83
GIP3	YPL137C	SKI3	P17883	1432 aa	Known RBP	3.63	□□□□□ -1.83
GIP3	YPL137C	DIP2	Q12220	943 aa	Predicted RBP	3.62	□□□□□ -1.83
GIP3	YPL137C	NUP170	P38181	1502 aa		3.61	□□□□□ -1.83
GIP3	YPL137C	VTH1	P40438	1549 aa		3.61	□□□□□ -1.83
GIP3	YPL137C	VTH2	P40890	1549 aa		3.61	□□□□□ -1.83
GIP3	YPL137C	BUD3	P25558	1636 aa		3.61	□□□□□ -1.83
GIP3	YPL137C	SNQ2	P32568	1501 aa	Known RBP	3.61	□□□□□ -1.83
GIP3	YPL137C	NUP159	P40477	1460 aa		3.61	□□□□□ -1.83
GIP3	YPL137C	MYO4	P32492	1471 aa		3.6	□□□□□ -1.83
GIP3	YPL137C	GDB1	Q06625	1536 aa		3.59	□□□□□ -1.83
GIP3	YPL137C	MMS1	Q06211	1407 aa		3.58	□□□□□ -1.84
GIP3	YPL137C	DNF3	Q12674	1656 aa		3.58	□□□□□ -1.84
GIP3	YPL137C	ULS1	Q08562	1619 aa		3.58	□□□□□ -1.84
GIP3	YPL137C	STU1	P38198	1513 aa		3.58	□□□□□ -1.84
GIP3	YPL137C	PDR15	Q04182	1529 aa	Known RBP	3.58	□□□□□ -1.84
GIP3	YPL137C	TRM732	Q03496	1420 aa		3.57	□□□□□ -1.84
GIP3	YPL137C	TY3B-G	Q99315	1547 aa		3.56	□□□□□ -1.84
GIP3	YPL137C	ARO1	P08566	1588 aa	Known RBP	3.56	□□□□□ -1.84
GIP3	YPL137C	SPP41	P38904	1435 aa		3.56	□□□□□ -1.84
GIP3	YPL137C	DRS2	P39524	1355 aa		3.55	□□□□□ -1.84
GIP3	YPL137C	TSC11	P40061	1430 aa		3.55	□□□□□ -1.84
GIP3	YPL137C	LEO1	P38439	464 aa		3.53	□□□□□ -1.84
GIP3	YPL137C	TY1B-NL2	Q99337	1749 aa	Known RBP	3.52	□□□□□ -1.85
GIP3	YPL137C	PDR10	P51533	1564 aa		3.52	□□□□□ -1.85
GIP3	YPL137C	PRY3	P47033	881 aa		3.51	□□□□□ -1.85
GIP3	YPL137C	ITT1	Q04638	464 aa		3.5	□□□□□ -1.85
GIP3	YPL137C	IQG1	Q12280	1495 aa		3.48	□□□□□ -1.85
GIP3	YPL137C	YFR006W	P43590	535 aa		3.48	□□□□□ -1.85
GIP3	YPL137C	SEC7	P11075	2009 aa	Known RBP	3.46	□□□□□ -1.86
GIP3	YPL137C	YBT1	P32386	1661 aa		3.46	□□□□□ -1.86
GIP3	YPL137C	NUP188	P52593	1655 aa	Known RBP	3.45	□□□□□ -1.86
GIP3	YPL137C	VMR1	P38735	1592 aa		3.42	□□□□□ -1.86
GIP3	YPL137C	USO1	P25386	1790 aa		3.41	□□□□□ -1.86
GIP3	YPL137C	LEU3	P08638	886 aa		3.39	□□□□□ -1.87
GIP3	YPL137C	YTA7	P40340	1379 aa		3.38	□□□□□ -1.87
GIP3	YPL137C	STH1	P32597	1359 aa		3.38	□□□□□ -1.87
GIP3	YPL137C	CAT8	P39113	1433 aa		3.38	□□□□□ -1.87
GIP3	YPL137C	YRF1-2	P40105	1681 aa		3.38	□□□□□ -1.87
GIP3	YPL137C	SAS10	Q12136	610 aa	Predicted RBP	3.36	□□□□□ -1.87
GIP3	YPL137C	IML1	P47170	1584 aa		3.36	□□□□□ -1.87
GIP3	YPL137C	DMA1	P38823	416 aa		3.35	□□□□□ -1.87
GIP3	YPL137C	ABP1	P15891	592 aa	Known RBP	3.34	□□□□□ -1.87
GIP3	YPL137C	YCK3	P39962	524 aa		3.33	□□□□□ -1.88
GIP3	YPL137C	MET10	P39692	1035 aa		3.32	□□□□□ -1.88
GIP3	YPL137C	PDR5	P33302	1511 aa	Known RBP	3.32	□□□□□ -1.88
GIP3	YPL137C	AAD16	Q02895	342 aa		3.31	□□□□□ -1.88
GIP3	YPL137C	PRI1	P10363	409 aa		3.31	□□□□□ -1.88
GIP3	YPL137C	BCK1	Q01389	1478 aa		3.29	□□□□□ -1.88
GIP3	YPL137C	YSP2	Q06681	1438 aa		3.28	□□□□□ -1.88
GIP3	YPL137C	NUP157	P40064	1391 aa	Known RBP	3.28	□□□□□ -1.88
GIP3	YPL137C	NUP192	P47054	1683 aa		3.26	□□□□□ -1.89
GIP3	YPL137C	RIM101	P33400	625 aa		3.26	□□□□□ -1.89
GIP3	YPL137C	GCN2	P15442	1659 aa		3.25	□□□□□ -1.89
GIP3	YPL137C	ISW2	Q08773	1120 aa		3.25	□□□□□ -1.89
GIP3	YPL137C	EDE1	P34216	1381 aa		3.24	□□□□□ -1.89
GIP3	YPL137C	RPG1	P38249	964 aa	Known RBP	3.24	□□□□□ -1.89
GIP3	YPL137C	TSR3	Q12094	313 aa	Known RBP	3.24	□□□□□ -1.89
GIP3	YPL137C	SPT21	P35209	758 aa		3.21	□□□□□ -1.9
GIP3	YPL137C	RRP5	Q05022	1729 aa	Known RBP	3.21	□□□□□ -1.9
GIP3	YPL137C	BNR1	P40450	1375 aa		3.21	□□□□□ -1.9
GIP3	YPL137C	GEA1	P47102	1408 aa	Predicted RBP	3.2	□□□□□ -1.9
GIP3	YPL137C	RPN1	P38764	993 aa	Known RBP	3.2	□□□□□ -1.9
GIP3	YPL137C	SSP1	P38871	571 aa		3.19	□□□□□ -1.9
GIP3	YPL137C	YMR196W	Q04336	1088 aa		3.19	□□□□□ -1.9
GIP3	YPL137C	YAH1	Q12184	172 aa	Known RBP	3.19	□□□□□ -1.9
GIP3	YPL137C	YAP3	P38749	330 aa		3.18	□□□□□ -1.9
GIP3	YPL137C	MAK10	Q02197	733 aa		3.18	□□□□□ -1.9
GIP3	YPL137C	YPR148C	Q06523	435 aa		3.16	□□□□□ -1.9
GIP3	YPL137C	RLF2	Q12495	606 aa		3.16	□□□□□ -1.9
GIP3	YPL137C	CFT1	Q06632	1357 aa	Known RBP	3.16	□□□□□ -1.9
GIP3	YPL137C	CKB1	P43639	278 aa		3.15	□□□□□ -1.9
GIP3	YPL137C	URN1	Q06525	465 aa	Known RBP	3.15	□□□□□ -1.9
GIP3	YPL137C	SRB8	P25648	1427 aa		3.15	□□□□□ -1.91
GIP3	YPL137C	FKS3	Q04952	1785 aa		3.14	□□□□□ -1.91
GIP3	YPL137C	SNF2	P22082	1703 aa		3.14	□□□□□ -1.91
GIP3	YPL137C	URB1	P34241	1764 aa	Known RBP	3.13	□□□□□ -1.91
GIP3	YPL137C	HAA1	Q12753	694 aa	Known RBP	3.13	□□□□□ -1.91
GIP3	YPL137C	IFH1	P39520	1085 aa		3.12	□□□□□ -1.91
GIP3	YPL137C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
GIP3	YPL137C	RPL17A	P05740	184 aa	Known RBP	3.12	□□□□□ -1.91
GIP3	YPL137C	RPL17B	P46990	184 aa	Known RBP	3.12	□□□□□ -1.91
GIP3	YPL137C	AIM44	Q99299	758 aa		3.12	□□□□□ -1.91
GIP3	YPL137C	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.11	□□□□□ -1.91
GIP3	YPL137C	TY4B-H	P0C2J7	1802 aa		3.1	□□□□□ -1.91
GIP3	YPL137C	TY4B-J	P47024	1803 aa		3.1	□□□□□ -1.91
GIP3	YPL137C	YRF1-3	P0CX14	1859 aa		3.1	□□□□□ -1.91
GIP3	YPL137C	YRF1-7	P0CX15	1859 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms