RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	RTS3	P53289	263 aa		4.96	□□□□□ -1.61
HOS3	YPL116W	TAF13	P11747	167 aa		4.96	□□□□□ -1.62
HOS3	YPL116W	CLC1	P17891	233 aa		4.96	□□□□□ -1.62
HOS3	YPL116W	OSW7	P43611	510 aa		4.96	□□□□□ -1.62
HOS3	YPL116W	MCM1	P11746	286 aa		4.95	□□□□□ -1.62
HOS3	YPL116W	KIP3	P53086	805 aa	Known RBP	4.95	□□□□□ -1.62
HOS3	YPL116W	NNF2	P53253	936 aa		4.95	□□□□□ -1.62
HOS3	YPL116W	BUD21	Q08492	214 aa	Predicted RBP	4.95	□□□□□ -1.62
HOS3	YPL116W	CDC11	P32458	415 aa		4.94	□□□□□ -1.62
HOS3	YPL116W	KOG1	P38873	1557 aa		4.93	□□□□□ -1.62
HOS3	YPL116W	SSP1	P38871	571 aa		4.93	□□□□□ -1.62
HOS3	YPL116W	NST1	P53935	1240 aa		4.93	□□□□□ -1.62
HOS3	YPL116W	SEC9	P40357	651 aa		4.92	□□□□□ -1.62
HOS3	YPL116W	HOS4	P40480	1083 aa		4.92	□□□□□ -1.62
HOS3	YPL116W	APL5	Q08951	932 aa	Known RBP	4.92	□□□□□ -1.62
HOS3	YPL116W	SKI3	P17883	1432 aa	Known RBP	4.92	□□□□□ -1.62
HOS3	YPL116W	SWR1	Q05471	1514 aa		4.92	□□□□□ -1.62
HOS3	YPL116W	HSC82	P15108	705 aa	Known RBP	4.92	□□□□□ -1.62
HOS3	YPL116W	TY1B-A	O13527	1196 aa	Known RBP	4.91	□□□□□ -1.62
HOS3	YPL116W	PET111	P08468	800 aa		4.91	□□□□□ -1.62
HOS3	YPL116W	YJR008W	P47085	338 aa		4.91	□□□□□ -1.62
HOS3	YPL116W	DOS2	P54858	310 aa		4.91	□□□□□ -1.62
HOS3	YPL116W	AAD16	Q02895	342 aa		4.91	□□□□□ -1.62
HOS3	YPL116W	SEC20	P28791	383 aa		4.9	□□□□□ -1.62
HOS3	YPL116W	AIM21	P40563	679 aa		4.9	□□□□□ -1.62
HOS3	YPL116W	MSH4	P40965	878 aa	Predicted RBP	4.9	□□□□□ -1.62
HOS3	YPL116W	LEM3	P42838	414 aa		4.9	□□□□□ -1.62
HOS3	YPL116W	ECM16	Q04217	1267 aa	Known RBP	4.9	□□□□□ -1.62
HOS3	YPL116W	CFT2	Q12102	859 aa	Predicted RBP	4.9	□□□□□ -1.62
HOS3	YPL116W	RRP14	P36080	434 aa	Known RBP	4.9	□□□□□ -1.63
HOS3	YPL116W	SAP190	P36123	1033 aa		4.9	□□□□□ -1.63
HOS3	YPL116W	RPT2	P40327	437 aa	Known RBP	4.9	□□□□□ -1.63
HOS3	YPL116W	SGS1	P35187	1447 aa		4.89	□□□□□ -1.63
HOS3	YPL116W	GEF1	P37020	779 aa		4.89	□□□□□ -1.63
HOS3	YPL116W	SIC1	P38634	284 aa		4.89	□□□□□ -1.63
HOS3	YPL116W	MTR4	P47047	1073 aa	Known RBP	4.89	□□□□□ -1.63
HOS3	YPL116W	ZDS1	P50111	915 aa	Known RBP	4.89	□□□□□ -1.63
HOS3	YPL116W	PDR1	P12383	1068 aa		4.88	□□□□□ -1.63
HOS3	YPL116W	MSH3	P25336	1018 aa		4.88	□□□□□ -1.63
HOS3	YPL116W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
HOS3	YPL116W	RPN7	Q06103	429 aa	Known RBP	4.88	□□□□□ -1.63
HOS3	YPL116W	IME2	P32581	645 aa		4.88	□□□□□ -1.63
HOS3	YPL116W	TY4A-J	P47023	414 aa		4.88	□□□□□ -1.63
HOS3	YPL116W	TAN1	P53072	289 aa	Predicted RBP	4.88	□□□□□ -1.63
HOS3	YPL116W	FAR11	P53917	953 aa		4.88	□□□□□ -1.63
HOS3	YPL116W	YML020W	Q03722	664 aa		4.88	□□□□□ -1.63
HOS3	YPL116W	TCB3	Q03640	1545 aa	Known RBP	4.88	□□□□□ -1.63
HOS3	YPL116W	RAD51	P25454	400 aa		4.87	□□□□□ -1.63
HOS3	YPL116W	BYE1	P36106	594 aa		4.87	□□□□□ -1.63
HOS3	YPL116W	RCF1	Q03713	159 aa		4.87	□□□□□ -1.63
HOS3	YPL116W	YLL054C	Q12244	843 aa		4.87	□□□□□ -1.63
HOS3	YPL116W	SUP35	P05453	685 aa	Known RBP	4.87	□□□□□ -1.63
HOS3	YPL116W	LTV1	P34078	463 aa		4.87	□□□□□ -1.63
HOS3	YPL116W	SSF1	P38789	453 aa	Predicted RBP	4.87	□□□□□ -1.63
HOS3	YPL116W	DJP1	P40564	432 aa		4.87	□□□□□ -1.63
HOS3	YPL116W	RSC8	P43609	557 aa	Known RBP	4.87	□□□□□ -1.63
HOS3	YPL116W	BRE1	Q07457	700 aa	Known RBP	4.87	□□□□□ -1.63
HOS3	YPL116W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
HOS3	YPL116W	AIM20	P40451	204 aa		4.86	□□□□□ -1.63
HOS3	YPL116W	YDR341C	Q05506	607 aa	Known RBP	4.86	□□□□□ -1.63
HOS3	YPL116W	PSK2	Q08217	1101 aa		4.86	□□□□□ -1.63
HOS3	YPL116W	NOP8	Q08287	484 aa	Predicted RBP	4.86	□□□□□ -1.63
HOS3	YPL116W	PKH1	Q03407	766 aa		4.85	□□□□□ -1.63
HOS3	YPL116W	RAD2	P07276	1031 aa		4.85	□□□□□ -1.63
HOS3	YPL116W	MEH1	Q02205	184 aa		4.85	□□□□□ -1.63
HOS3	YPL116W	PIM1	P36775	1133 aa		4.84	□□□□□ -1.63
HOS3	YPL116W	OPY1	P38271	328 aa		4.84	□□□□□ -1.63
HOS3	YPL116W	VID30	P53076	958 aa		4.84	□□□□□ -1.63
HOS3	YPL116W	PRP3	Q03338	469 aa	Predicted RBP	4.84	□□□□□ -1.63
HOS3	YPL116W	CLF1	Q12309	687 aa	Predicted RBP	4.84	□□□□□ -1.63
HOS3	YPL116W	ALD3	P54114	506 aa		4.84	□□□□□ -1.64
HOS3	YPL116W	SSA4	P22202	642 aa	Known RBP	4.83	□□□□□ -1.64
HOS3	YPL116W	DEP1	P31385	405 aa		4.83	□□□□□ -1.64
HOS3	YPL116W	GAL11	P19659	1081 aa		4.82	□□□□□ -1.64
HOS3	YPL116W	TAF1	P46677	1066 aa		4.82	□□□□□ -1.64
HOS3	YPL116W	NOP7	P53261	605 aa	Known RBP	4.82	□□□□□ -1.64
HOS3	YPL116W	CEF1	Q03654	590 aa	Predicted RBP	4.82	□□□□□ -1.64
HOS3	YPL116W	VPS5	Q92331	675 aa		4.82	□□□□□ -1.64
HOS3	YPL116W	SPC42	P36094	363 aa		4.82	□□□□□ -1.64
HOS3	YPL116W	GDE1	Q02979	1223 aa		4.82	□□□□□ -1.64
HOS3	YPL116W	GIR2	Q03768	265 aa	Predicted RBP	4.82	□□□□□ -1.64
HOS3	YPL116W	RRP15	Q06511	250 aa	Predicted RBP	4.82	□□□□□ -1.64
HOS3	YPL116W	IMH1	Q06704	911 aa	Known RBP	4.82	□□□□□ -1.64
HOS3	YPL116W	CTR9	P89105	1077 aa		4.81	□□□□□ -1.64
HOS3	YPL116W	RPC82	P32349	654 aa		4.81	□□□□□ -1.64
HOS3	YPL116W	NPR3	P38742	1146 aa		4.81	□□□□□ -1.64
HOS3	YPL116W	SEC27	P41811	889 aa	Known RBP	4.81	□□□□□ -1.64
HOS3	YPL116W	GGA1	Q06336	557 aa		4.81	□□□□□ -1.64
HOS3	YPL116W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
HOS3	YPL116W	SYH1	Q02875	849 aa	Known RBP	4.8	□□□□□ -1.64
HOS3	YPL116W	HEL2	Q05580	639 aa	Known RBP	4.8	□□□□□ -1.64
HOS3	YPL116W	YLR257W	Q06146	321 aa	Known RBP	4.8	□□□□□ -1.64
HOS3	YPL116W	TY1B-DR4	Q07793	1604 aa		4.8	□□□□□ -1.64
HOS3	YPL116W	TY4B-P	A0A0B7P3V8	1104 aa		4.79	□□□□□ -1.64
HOS3	YPL116W	MPE1	P35728	441 aa	Known RBP	4.79	□□□□□ -1.64
HOS3	YPL116W	RAD26	P40352	1085 aa		4.79	□□□□□ -1.64
HOS3	YPL116W	SMC3	P47037	1230 aa		4.79	□□□□□ -1.64
HOS3	YPL116W	PSR1	Q07800	427 aa		4.79	□□□□□ -1.64
HOS3	YPL116W	NFI1	Q12216	726 aa		4.79	□□□□□ -1.64
HOS3	YPL116W	CLN1	P20437	546 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms