RNA–Protein interactions for RNA: YOR316C

COT1, Transcript of Vacuolar transporter that mediates zinc transport into the vacuole, yeastyeast

Gene COT1, Length 1,320 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
COT1YOR316C SCY1P53009 804 aa8.86□□□□□ -0.99
COT1YOR316C TRM732Q03496 1420 aa8.85□□□□□ -0.99
COT1YOR316C RSM7P47150 247 aa8.84□□□□□ -0.99
COT1YOR316C SSP1P38871 571 aa8.82□□□□□ -1
COT1YOR316C MMS22Q06164 1454 aa8.82□□□□□ -1
COT1YOR316C VPS15P22219 1454 aa8.81□□□□□ -1
COT1YOR316C TOP2P06786 1428 aaKnown RBP8.81□□□□□ -1
COT1YOR316C YLR271WQ06152 274 aa8.8□□□□□ -1
COT1YOR316C TY1B-HO13535 1793 aa8.79□□□□□ -1
COT1YOR316C TY1B-DR5P0C2I2 1755 aa8.79□□□□□ -1
COT1YOR316C TY1B-DR6P0C2I3 1755 aa8.79□□□□□ -1
COT1YOR316C TY1B-LR2P0C2I5 1755 aa8.79□□□□□ -1
COT1YOR316C TY1B-LR3P0C2I6 1755 aaKnown RBP8.79□□□□□ -1
COT1YOR316C TY1B-PR1P0C2I9 1755 aaKnown RBP8.79□□□□□ -1
COT1YOR316C TY1B-PR2P0C2J0 1756 aa8.79□□□□□ -1
COT1YOR316C TY1B-PR3P0C2J1 1755 aaKnown RBP8.79□□□□□ -1
COT1YOR316C TY1B-JR1P47098 1755 aa8.79□□□□□ -1
COT1YOR316C TY1B-ML2Q03434 1755 aaKnown RBP8.79□□□□□ -1
COT1YOR316C TY1B-ER1Q03612 1755 aa8.79□□□□□ -1
COT1YOR316C TY1B-ML1Q04711 1755 aaKnown RBP8.79□□□□□ -1
COT1YOR316C TY1B-GR2Q12269 1755 aa8.79□□□□□ -1
COT1YOR316C TY1B-OLQ12273 1755 aa8.79□□□□□ -1
COT1YOR316C TY1B-PLQ12414 1755 aaKnown RBP8.79□□□□□ -1
COT1YOR316C DNF2Q12675 1612 aa8.79□□□□□ -1
COT1YOR316C NUP159P40477 1460 aa8.78□□□□□ -1
COT1YOR316C YRF1-1P0CX20 1796 aa8.77□□□□□ -1.01
COT1YOR316C YRF1-5P0CX21 1796 aa8.77□□□□□ -1.01
COT1YOR316C YRF1-8P0CX22 1796 aa8.77□□□□□ -1.01
COT1YOR316C TY2B-BQ12491 1770 aa8.76□□□□□ -1.01
COT1YOR316C EPS1P40557 701 aa8.75□□□□□ -1.01
COT1YOR316C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.74□□□□□ -1.01not detected
COT1YOR316C AI2P03876 854 aa8.72□□□□□ -1.01
COT1YOR316C TY1B-DR3Q99231 1755 aa8.7□□□□□ -1.02
COT1YOR316C SLX5P32828 619 aaKnown RBP8.69□□□□□ -1.02
COT1YOR316C BBC1P47068 1157 aa8.69□□□□□ -1.02
COT1YOR316C BDF1P35817 686 aa8.68□□□□□ -1.02
COT1YOR316C YOR093CQ12275 1648 aa8.68□□□□□ -1.02
COT1YOR316C SPP41P38904 1435 aa8.64□□□□□ -1.03
COT1YOR316C NTE1Q04958 1679 aa8.62□□□□□ -1.03
COT1YOR316C NUP170P38181 1502 aa8.62□□□□□ -1.03
COT1YOR316C SMC4Q12267 1418 aa8.6□□□□□ -1.03
COT1YOR316C PSD2P53037 1138 aaKnown RBP8.59□□□□□ -1.03
COT1YOR316C TSC11P40061 1430 aa8.59□□□□□ -1.03
COT1YOR316C TY1B-JR2P47100 1755 aaKnown RBP8.59□□□□□ -1.03
COT1YOR316C TY1B-ER2Q03619 1755 aa8.59□□□□□ -1.03
COT1YOR316C TY1B-MR1Q04214 1755 aa8.59□□□□□ -1.03
COT1YOR316C TY1B-MR2Q04670 1755 aaKnown RBP8.59□□□□□ -1.03
COT1YOR316C TY1B-LR1Q12088 1755 aaKnown RBP8.59□□□□□ -1.03
COT1YOR316C TY1B-NL1Q12112 1755 aa8.59□□□□□ -1.03
COT1YOR316C TY1B-GR1Q12141 1755 aa8.59□□□□□ -1.03
COT1YOR316C TY1B-BLQ12490 1755 aa8.59□□□□□ -1.03
COT1YOR316C RPO21P04050 1733 aaKnown RBP8.57□□□□□ -1.04
COT1YOR316C TIF4632P39936 914 aaKnown RBP8.56□□□□□ -1.04
COT1YOR316C SNT2P53127 1403 aa8.56□□□□□ -1.04
COT1YOR316C MGA2P40578 1113 aa8.55□□□□□ -1.04
COT1YOR316C VTH1P40438 1549 aa8.55□□□□□ -1.04
COT1YOR316C VTH2P40890 1549 aa8.55□□□□□ -1.04
COT1YOR316C POL1P13382 1468 aa8.55□□□□□ -1.04
COT1YOR316C CST9Q06032 482 aa8.54□□□□□ -1.04
COT1YOR316C YOR1P53049 1477 aa8.53□□□□□ -1.04
COT1YOR316C MET10P39692 1035 aa8.52□□□□□ -1.05
COT1YOR316C SPO14P36126 1683 aa8.51□□□□□ -1.05
COT1YOR316C MYO4P32492 1471 aa8.49□□□□□ -1.05
COT1YOR316C TGL3P40308 642 aa8.48□□□□□ -1.05
COT1YOR316C TRM3Q07527 1436 aa8.47□□□□□ -1.05
COT1YOR316C ULS1Q08562 1619 aa8.46□□□□□ -1.05
COT1YOR316C DOP1Q03921 1698 aa8.46□□□□□ -1.06
COT1YOR316C MRM1P25270 412 aa8.46□□□□□ -1.06
COT1YOR316C STU1P38198 1513 aa8.43□□□□□ -1.06
COT1YOR316C SNQ2P32568 1501 aaKnown RBP8.4□□□□□ -1.06
COT1YOR316C PDR10P51533 1564 aa8.4□□□□□ -1.07
COT1YOR316C PDR12Q02785 1511 aa8.39□□□□□ -1.07
COT1YOR316C IQG1Q12280 1495 aa8.38□□□□□ -1.07
COT1YOR316C GDB1Q06625 1536 aa8.35□□□□□ -1.07
COT1YOR316C STH1P32597 1359 aa8.34□□□□□ -1.07
COT1YOR316C BUD3P25558 1636 aa8.34□□□□□ -1.08
COT1YOR316C RTT106P40161 455 aa8.33□□□□□ -1.08
COT1YOR316C PDR15Q04182 1529 aaKnown RBP8.33□□□□□ -1.08
COT1YOR316C YTA7P40340 1379 aa8.31□□□□□ -1.08
COT1YOR316C DNF3Q12674 1656 aa8.31□□□□□ -1.08
COT1YOR316C ARO1P08566 1588 aaKnown RBP8.29□□□□□ -1.08
COT1YOR316C RTG3P38165 486 aa8.29□□□□□ -1.08
COT1YOR316C RCR1P38212 213 aa8.29□□□□□ -1.08
COT1YOR316C NUP157P40064 1391 aaKnown RBP8.27□□□□□ -1.09
COT1YOR316C NSR1P27476 414 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
COT1YOR316C YAP5P40574 245 aa8.26□□□□□ -1.09
COT1YOR316C YAP3P38749 330 aa8.24□□□□□ -1.09
COT1YOR316C YOR238WQ08634 303 aa8.23□□□□□ -1.09
COT1YOR316C MAK10Q02197 733 aa8.22□□□□□ -1.09
COT1YOR316C CHC1P22137 1653 aaKnown RBP8.21□□□□□ -1.09
COT1YOR316C VPS29P38759 282 aa8.21□□□□□ -1.1
COT1YOR316C PIB1Q06651 286 aa8.19□□□□□ -1.1
COT1YOR316C BNR1P40450 1375 aa8.18□□□□□ -1.1
COT1YOR316C YMR1P47147 688 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
COT1YOR316C MLP2P40457 1679 aa8.17□□□□□ -1.1
COT1YOR316C MST1P07236 462 aa8.17□□□□□ -1.1
COT1YOR316C TY3B-GQ99315 1547 aa8.17□□□□□ -1.1
COT1YOR316C RAM2P29703 316 aa8.16□□□□□ -1.1
COT1YOR316C DBP1P24784 617 aaKnown RBP8.14□□□□□ -1.11
COT1YOR316C STS1P38637 319 aa8.13□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms