RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A YRF1-5P0CX21 1796 aa10.05□□□□□ -0.8
KSH1YNL024C-A YRF1-8P0CX22 1796 aa10.05□□□□□ -0.8
KSH1YNL024C-A BNI1P41832 1953 aa10.05□□□□□ -0.8
KSH1YNL024C-A NTE1Q04958 1679 aa10.03□□□□□ -0.8
KSH1YNL024C-A REB1P21538 810 aa10.03□□□□□ -0.8
KSH1YNL024C-A LTE1P07866 1435 aa10.02□□□□□ -0.81
KSH1YNL024C-A MRPL32P25348 183 aa10.01□□□□□ -0.81
KSH1YNL024C-A MMS22Q06164 1454 aa10.01□□□□□ -0.81
KSH1YNL024C-A YTA7P40340 1379 aa10.01□□□□□ -0.81
KSH1YNL024C-A RPO21P04050 1733 aaKnown RBP9.97□□□□□ -0.81
KSH1YNL024C-A GEA2P39993 1459 aaKnown RBP9.96□□□□□ -0.82
KSH1YNL024C-A STU1P38198 1513 aa9.96□□□□□ -0.82
KSH1YNL024C-A YOR1P53049 1477 aa9.94□□□□□ -0.82
KSH1YNL024C-A TRM732Q03496 1420 aa9.93□□□□□ -0.82
KSH1YNL024C-A SMC4Q12267 1418 aa9.91□□□□□ -0.82
KSH1YNL024C-A MYO4P32492 1471 aa9.88□□□□□ -0.83
KSH1YNL024C-A VTH1P40438 1549 aa9.87□□□□□ -0.83
KSH1YNL024C-A VTH2P40890 1549 aa9.87□□□□□ -0.83
KSH1YNL024C-A SPP41P38904 1435 aa9.87□□□□□ -0.83
KSH1YNL024C-A NUP159P40477 1460 aa9.86□□□□□ -0.83
KSH1YNL024C-A VPS15P22219 1454 aa9.85□□□□□ -0.83
KSH1YNL024C-A MIF2P35201 549 aa9.84□□□□□ -0.83
KSH1YNL024C-A IRC20Q06554 1556 aa9.8□□□□□ -0.84
KSH1YNL024C-A TSC11P40061 1430 aa9.79□□□□□ -0.84
KSH1YNL024C-A TAF7Q05021 590 aa9.78□□□□□ -0.84
KSH1YNL024C-A SPO14P36126 1683 aa9.77□□□□□ -0.84
KSH1YNL024C-A ITT1Q04638 464 aa9.77□□□□□ -0.85
KSH1YNL024C-A DNF2Q12675 1612 aa9.76□□□□□ -0.85
KSH1YNL024C-A MMS1Q06211 1407 aa9.75□□□□□ -0.85
KSH1YNL024C-A SPT21P35209 758 aa9.75□□□□□ -0.85
KSH1YNL024C-A DRS2P39524 1355 aa9.74□□□□□ -0.85
KSH1YNL024C-A MLP2P40457 1679 aa9.74□□□□□ -0.85
KSH1YNL024C-A SNQ2P32568 1501 aaKnown RBP9.72□□□□□ -0.85
KSH1YNL024C-A NUP170P38181 1502 aa9.72□□□□□ -0.85
KSH1YNL024C-A ULS1Q08562 1619 aa9.71□□□□□ -0.85
KSH1YNL024C-A DOP1Q03921 1698 aa9.71□□□□□ -0.86
KSH1YNL024C-A ABP1P15891 592 aaKnown RBP9.66□□□□□ -0.86
KSH1YNL024C-A SAS10Q12136 610 aaPredicted RBP9.66□□□□□ -0.86
KSH1YNL024C-A STH1P32597 1359 aa9.65□□□□□ -0.86
KSH1YNL024C-A SNT2P53127 1403 aa9.62□□□□□ -0.87
KSH1YNL024C-A YKR023WP36119 530 aaKnown RBP9.59□□□□□ -0.87
KSH1YNL024C-A CDC27P38042 758 aa9.59□□□□□ -0.87
KSH1YNL024C-A PDR12Q02785 1511 aa9.58□□□□□ -0.88
KSH1YNL024C-A YGL015CP33199 130 aa9.57□□□□□ -0.88
KSH1YNL024C-A GDB1Q06625 1536 aa9.56□□□□□ -0.88
KSH1YNL024C-A CHC1P22137 1653 aaKnown RBP9.55□□□□□ -0.88
KSH1YNL024C-A IKI3Q06706 1349 aaKnown RBP9.53□□□□□ -0.88
KSH1YNL024C-A YOR093CQ12275 1648 aa9.52□□□□□ -0.89
KSH1YNL024C-A PDR15Q04182 1529 aaKnown RBP9.51□□□□□ -0.89
KSH1YNL024C-A YFR006WP43590 535 aa9.51□□□□□ -0.89
KSH1YNL024C-A MET10P39692 1035 aa9.5□□□□□ -0.89
KSH1YNL024C-A PDR10P51533 1564 aa9.5□□□□□ -0.89
KSH1YNL024C-A GEA1P47102 1408 aaPredicted RBP9.48□□□□□ -0.89
KSH1YNL024C-A TRM3Q07527 1436 aa9.48□□□□□ -0.89
KSH1YNL024C-A BUD3P25558 1636 aa9.48□□□□□ -0.89
KSH1YNL024C-A IQG1Q12280 1495 aa9.47□□□□□ -0.89
KSH1YNL024C-A RTT106P40161 455 aa9.45□□□□□ -0.9
KSH1YNL024C-A SEC7P11075 2009 aaKnown RBP9.44□□□□□ -0.9
KSH1YNL024C-A YBT1P32386 1661 aa9.43□□□□□ -0.9
KSH1YNL024C-A RIM101P33400 625 aa9.42□□□□□ -0.9
KSH1YNL024C-A NUP157P40064 1391 aaKnown RBP9.41□□□□□ -0.9
KSH1YNL024C-A IFH1P39520 1085 aa9.41□□□□□ -0.9
KSH1YNL024C-A CAT8P39113 1433 aa9.4□□□□□ -0.9
KSH1YNL024C-A ARO1P08566 1588 aaKnown RBP9.4□□□□□ -0.9
KSH1YNL024C-A DNF3Q12674 1656 aa9.39□□□□□ -0.91
KSH1YNL024C-A TFC8Q12308 588 aa9.38□□□□□ -0.91
KSH1YNL024C-A HOP09932 586 aa9.36□□□□□ -0.91
KSH1YNL024C-A TY3B-GQ99315 1547 aa9.32□□□□□ -0.92
KSH1YNL024C-A DCD1P06773 312 aa9.32□□□□□ -0.92
KSH1YNL024C-A USO1P25386 1790 aa9.32□□□□□ -0.92
KSH1YNL024C-A UBP10P53874 792 aaPredicted RBP9.29□□□□□ -0.92
KSH1YNL024C-A SSM4P40318 1319 aa9.27□□□□□ -0.93
KSH1YNL024C-A MAP2P38174 421 aaKnown RBP9.26□□□□□ -0.93
KSH1YNL024C-A SRB8P25648 1427 aa9.24□□□□□ -0.93
KSH1YNL024C-A TFA1P36100 482 aa9.24□□□□□ -0.93
KSH1YNL024C-A YSP2Q06681 1438 aa9.14□□□□□ -0.95
KSH1YNL024C-A CKB1P43639 278 aa9.13□□□□□ -0.95
KSH1YNL024C-A BNR1P40450 1375 aa9.12□□□□□ -0.95
KSH1YNL024C-A OXP1P28273 1286 aa9.1□□□□□ -0.95
KSH1YNL024C-A BUD21Q08492 214 aaPredicted RBP9.09□□□□□ -0.95
KSH1YNL024C-A NUP188P52593 1655 aaKnown RBP9.08□□□□□ -0.96
KSH1YNL024C-A YAP3P38749 330 aa9.08□□□□□ -0.96
KSH1YNL024C-A SCY1P53009 804 aa9.08□□□□□ -0.96
KSH1YNL024C-A GCN2P15442 1659 aa9.07□□□□□ -0.96
KSH1YNL024C-A BCH2P36122 765 aa9.07□□□□□ -0.96
KSH1YNL024C-A IML1P47170 1584 aa9.07□□□□□ -0.96
KSH1YNL024C-A TY1B-NL2Q99337 1749 aaKnown RBP9.05□□□□□ -0.96
KSH1YNL024C-A MAK10Q02197 733 aa9□□□□□ -0.97
KSH1YNL024C-A VMR1P38735 1592 aa8.99□□□□□ -0.97
KSH1YNL024C-A HAP1P0CE41 1502 aa8.98□□□□□ -0.97
KSH1YNL024C-A PDR5P33302 1511 aaKnown RBP8.98□□□□□ -0.97
KSH1YNL024C-A PAF1P38351 445 aa8.97□□□□□ -0.97
KSH1YNL024C-A URN1Q06525 465 aaKnown RBP8.96□□□□□ -0.98
KSH1YNL024C-A SLX5P32828 619 aaKnown RBP8.95□□□□□ -0.98
KSH1YNL024C-A NOP7P53261 605 aaKnown RBP8.95□□□□□ -0.98
KSH1YNL024C-A POL5P39985 1022 aaKnown RBP8.92□□□□□ -0.98
KSH1YNL024C-A PTP3P40048 928 aa8.9□□□□□ -0.98
KSH1YNL024C-A YIL055CP40523 627 aaKnown RBP8.89□□□□□ -0.99
KSH1YNL024C-A RAV1P47104 1357 aa8.87□□□□□ -0.99
KSH1YNL024C-A EPS1P40557 701 aa8.87□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms