RNA–Protein interactions for RNA: YMR213W

CEF1, Transcript of Essential splicing factor, yeastyeast

Gene CEF1, Length 1,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CEF1YMR213W YLR271WQ06152 274 aa7.91□□□□□ -1.14
CEF1YMR213W ATG2P53855 1592 aa7.91□□□□□ -1.14
CEF1YMR213W SCC2Q04002 1493 aa7.9□□□□□ -1.14
CEF1YMR213W BPT1P14772 1559 aa7.9□□□□□ -1.15
CEF1YMR213W ESP1Q03018 1630 aa7.9□□□□□ -1.15
CEF1YMR213W MDS3P53094 1487 aa7.89□□□□□ -1.15
CEF1YMR213W NOP53Q12080 455 aaKnown RBP7.89□□□□□ -1.15
CEF1YMR213W SMC4Q12267 1418 aa7.88□□□□□ -1.15
CEF1YMR213W POL1P13382 1468 aa7.87□□□□□ -1.15
CEF1YMR213W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.87□□□□□ -1.15not detected
CEF1YMR213W PAF1P38351 445 aa7.86□□□□□ -1.15
CEF1YMR213W PSD2P53037 1138 aaKnown RBP7.86□□□□□ -1.15
CEF1YMR213W RNA1P11745 407 aaKnown RBP7.85□□□□□ -1.15
CEF1YMR213W NUG1P40010 520 aaKnown RBP7.84□□□□□ -1.15
CEF1YMR213W MMS1Q06211 1407 aa7.84□□□□□ -1.15
CEF1YMR213W ROX1P25042 368 aa7.84□□□□□ -1.15
CEF1YMR213W YPK9Q12697 1472 aa7.84□□□□□ -1.16
CEF1YMR213W FUN12P39730 1002 aaKnown RBP7.83□□□□□ -1.16
CEF1YMR213W ENV11P53246 860 aa7.82□□□□□ -1.16
CEF1YMR213W DMA2P53924 522 aa7.82□□□□□ -1.16
CEF1YMR213W AAD16Q02895 342 aa7.81□□□□□ -1.16
CEF1YMR213W FPR4Q06205 392 aaPredicted RBP7.81□□□□□ -1.16
CEF1YMR213W MYO4P32492 1471 aa7.8□□□□□ -1.16
CEF1YMR213W DEF1P35732 738 aaKnown RBP7.8□□□□□ -1.16
CEF1YMR213W RIX1P38883 763 aaPredicted RBP7.8□□□□□ -1.16
CEF1YMR213W IRC20Q06554 1556 aa7.79□□□□□ -1.16
CEF1YMR213W KRI1P42846 591 aaKnown RBP7.79□□□□□ -1.16
CEF1YMR213W NAP1P25293 417 aaKnown RBP7.77□□□□□ -1.17
CEF1YMR213W SLN1P39928 1220 aaPredicted RBP7.77□□□□□ -1.17
CEF1YMR213W NOP58Q12499 511 aaKnown RBP7.77□□□□□ -1.17
CEF1YMR213W MHP1P43638 1398 aa7.77□□□□□ -1.17
CEF1YMR213W MGA2P40578 1113 aa7.76□□□□□ -1.17
CEF1YMR213W ABP1P15891 592 aaKnown RBP7.76□□□□□ -1.17
CEF1YMR213W CTR9P89105 1077 aa7.76□□□□□ -1.17
CEF1YMR213W YIL055CP40523 627 aaKnown RBP7.75□□□□□ -1.17
CEF1YMR213W YIR014WP40570 242 aa7.75□□□□□ -1.17
CEF1YMR213W YCF1P39109 1515 aaKnown RBP7.75□□□□□ -1.17
CEF1YMR213W TSC11P40061 1430 aa7.74□□□□□ -1.17
CEF1YMR213W DJP1P40564 432 aa7.74□□□□□ -1.17
CEF1YMR213W CST9Q06032 482 aa7.74□□□□□ -1.17
CEF1YMR213W RPO31P04051 1460 aa7.73□□□□□ -1.17
CEF1YMR213W SNQ2P32568 1501 aaKnown RBP7.72□□□□□ -1.17
CEF1YMR213W RPN1P38764 993 aaKnown RBP7.71□□□□□ -1.17
CEF1YMR213W YPP1P46951 817 aa7.71□□□□□ -1.17
CEF1YMR213W YKR023WP36119 530 aaKnown RBP7.7□□□□□ -1.18
CEF1YMR213W IFH1P39520 1085 aa7.7□□□□□ -1.18
CEF1YMR213W RAD26P40352 1085 aa7.7□□□□□ -1.18
CEF1YMR213W YRB30P53107 440 aaPredicted RBP7.7□□□□□ -1.18
CEF1YMR213W TSR3Q12094 313 aaKnown RBP7.7□□□□□ -1.18
CEF1YMR213W EDE1P34216 1381 aa7.7□□□□□ -1.18
CEF1YMR213W GEA1P47102 1408 aaPredicted RBP7.7□□□□□ -1.18
CEF1YMR213W SPC110P32380 944 aa7.69□□□□□ -1.18
CEF1YMR213W NUP159P40477 1460 aa7.69□□□□□ -1.18
CEF1YMR213W SMC3P47037 1230 aa7.69□□□□□ -1.18
CEF1YMR213W YOR1P53049 1477 aa7.69□□□□□ -1.18
CEF1YMR213W NOT3P06102 836 aaKnown RBP7.69□□□□□ -1.18
CEF1YMR213W PCT1P13259 424 aa7.69□□□□□ -1.18
CEF1YMR213W SPT2P06843 333 aaPredicted RBP7.67□□□□□ -1.18
CEF1YMR213W RSM7P47150 247 aa7.67□□□□□ -1.18
CEF1YMR213W GCN2P15442 1659 aa7.67□□□□□ -1.18
CEF1YMR213W RKR1Q04781 1562 aa7.66□□□□□ -1.18
CEF1YMR213W PDR15Q04182 1529 aaKnown RBP7.65□□□□□ -1.18
CEF1YMR213W VPS24P36095 224 aaKnown RBP7.65□□□□□ -1.18
CEF1YMR213W NMD2P38798 1089 aaKnown RBP7.65□□□□□ -1.18
CEF1YMR213W MSP1P28737 362 aa7.64□□□□□ -1.19
CEF1YMR213W ARL1P38116 183 aaKnown RBP7.63□□□□□ -1.19
CEF1YMR213W CDC45Q08032 650 aa7.63□□□□□ -1.19
CEF1YMR213W PSH1Q12161 406 aa7.62□□□□□ -1.19
CEF1YMR213W KIP3P53086 805 aaKnown RBP7.61□□□□□ -1.19
CEF1YMR213W KNS1P32350 737 aaPredicted RBP7.61□□□□□ -1.19
CEF1YMR213W ORC1P54784 914 aaPredicted RBP7.61□□□□□ -1.19
CEF1YMR213W RVB2Q12464 471 aaKnown RBP7.6□□□□□ -1.19
CEF1YMR213W DNF1P32660 1571 aa7.59□□□□□ -1.19
CEF1YMR213W HSP82P02829 709 aaKnown RBP7.59□□□□□ -1.19
CEF1YMR213W VPS27P40343 622 aaKnown RBP7.59□□□□□ -1.19
CEF1YMR213W TRM3Q07527 1436 aa7.59□□□□□ -1.19
CEF1YMR213W SWE1P32944 819 aa7.59□□□□□ -1.2
CEF1YMR213W DSN1P40568 576 aa7.57□□□□□ -1.2
CEF1YMR213W RPP0P05317 312 aaKnown RBP7.56□□□□□ -1.2
CEF1YMR213W CLB5P30283 435 aa7.56□□□□□ -1.2
CEF1YMR213W TPM2P40414 161 aa7.56□□□□□ -1.2
CEF1YMR213W NOP7P53261 605 aaKnown RBP7.56□□□□□ -1.2
CEF1YMR213W VPS15P22219 1454 aa7.56□□□□□ -1.2
CEF1YMR213W MSH4P40965 878 aaPredicted RBP7.56□□□□□ -1.2
CEF1YMR213W YNL011CP53980 444 aa7.56□□□□□ -1.2
CEF1YMR213W PDS5Q04264 1277 aa7.56□□□□□ -1.2
CEF1YMR213W PDR5P33302 1511 aaKnown RBP7.55□□□□□ -1.2
CEF1YMR213W TY2B-LR1P0C2J3 1770 aa7.55□□□□□ -1.2
CEF1YMR213W TY2B-FP0CX63 1770 aa7.55□□□□□ -1.2
CEF1YMR213W TY2B-GR2P0CX64 1770 aa7.55□□□□□ -1.2
CEF1YMR213W TY2B-CP25384 1770 aa7.55□□□□□ -1.2
CEF1YMR213W TY2B-DR2Q03494 1770 aa7.55□□□□□ -1.2
CEF1YMR213W TY1B-DR1Q03855 1755 aa7.55□□□□□ -1.2
CEF1YMR213W TY2B-DR3Q07791 1770 aaKnown RBP7.55□□□□□ -1.2
CEF1YMR213W TY2B-OR1Q12113 1770 aa7.55□□□□□ -1.2
CEF1YMR213W TY2B-DR1Q12472 1770 aa7.55□□□□□ -1.2
CEF1YMR213W TY2B-OR2Q12501 1770 aa7.55□□□□□ -1.2
CEF1YMR213W ESC1Q03661 1658 aaKnown RBP7.55□□□□□ -1.2
CEF1YMR213W TY3B-GQ99315 1547 aa7.54□□□□□ -1.2
CEF1YMR213W RAM2P29703 316 aa7.54□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms