RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C SNT2P53127 1403 aa3.61□□□□□ -1.83
IRC20YLR247C MLP2P40457 1679 aa3.6□□□□□ -1.83
IRC20YLR247C PDR15Q04182 1529 aaKnown RBP3.59□□□□□ -1.83
IRC20YLR247C MMS22Q06164 1454 aa3.59□□□□□ -1.83
IRC20YLR247C DNF3Q12674 1656 aa3.59□□□□□ -1.83
IRC20YLR247C HAP1P0CE41 1502 aa3.58□□□□□ -1.84
IRC20YLR247C POL1P13382 1468 aa3.58□□□□□ -1.84
IRC20YLR247C NUP170P38181 1502 aa3.57□□□□□ -1.84
IRC20YLR247C MMS1Q06211 1407 aa3.57□□□□□ -1.84
IRC20YLR247C SMC4Q12267 1418 aa3.57□□□□□ -1.84
IRC20YLR247C SKI3P17883 1432 aaKnown RBP3.57□□□□□ -1.84
IRC20YLR247C ULS1Q08562 1619 aa3.56□□□□□ -1.84
IRC20YLR247C NUP159P40477 1460 aa3.56□□□□□ -1.84
IRC20YLR247C VTH1P40438 1549 aa3.56□□□□□ -1.84
IRC20YLR247C VTH2P40890 1549 aa3.56□□□□□ -1.84
IRC20YLR247C ARO1P08566 1588 aaKnown RBP3.56□□□□□ -1.84
IRC20YLR247C YOR1P53049 1477 aa3.56□□□□□ -1.84
IRC20YLR247C TRM3Q07527 1436 aa3.55□□□□□ -1.84
IRC20YLR247C SNQ2P32568 1501 aaKnown RBP3.55□□□□□ -1.84
IRC20YLR247C YFR006WP43590 535 aa3.54□□□□□ -1.84
IRC20YLR247C GDB1Q06625 1536 aa3.54□□□□□ -1.84
IRC20YLR247C TY3B-GQ99315 1547 aa3.53□□□□□ -1.84
IRC20YLR247C TRM732Q03496 1420 aa3.52□□□□□ -1.85
IRC20YLR247C ITT1Q04638 464 aa3.52□□□□□ -1.85
IRC20YLR247C BUD3P25558 1636 aa3.51□□□□□ -1.85
IRC20YLR247C DRS2P39524 1355 aa3.5□□□□□ -1.85
IRC20YLR247C MYO4P32492 1471 aa3.5□□□□□ -1.85
IRC20YLR247C PDR10P51533 1564 aa3.49□□□□□ -1.85
IRC20YLR247C USO1P25386 1790 aa3.48□□□□□ -1.85
IRC20YLR247C SPP41P38904 1435 aa3.47□□□□□ -1.85
IRC20YLR247C PRY3P47033 881 aa3.47□□□□□ -1.85
IRC20YLR247C TY1B-NL2Q99337 1749 aaKnown RBP3.47□□□□□ -1.85
IRC20YLR247C TSC11P40061 1430 aa3.47□□□□□ -1.85
IRC20YLR247C SEC7P11075 2009 aaKnown RBP3.43□□□□□ -1.86
IRC20YLR247C STU1P38198 1513 aa3.43□□□□□ -1.86
IRC20YLR247C NUP188P52593 1655 aaKnown RBP3.43□□□□□ -1.86
IRC20YLR247C YBT1P32386 1661 aa3.42□□□□□ -1.86
IRC20YLR247C IQG1Q12280 1495 aa3.4□□□□□ -1.86
IRC20YLR247C YRF1-2P40105 1681 aa3.4□□□□□ -1.87
IRC20YLR247C ISW2Q08773 1120 aa3.38□□□□□ -1.87
IRC20YLR247C AAD16Q02895 342 aa3.38□□□□□ -1.87
IRC20YLR247C VMR1P38735 1592 aa3.34□□□□□ -1.87
IRC20YLR247C ABP1P15891 592 aaKnown RBP3.34□□□□□ -1.87
IRC20YLR247C IML1P47170 1584 aa3.34□□□□□ -1.88
IRC20YLR247C RPG1P38249 964 aaKnown RBP3.29□□□□□ -1.88
IRC20YLR247C PRI1P10363 409 aa3.28□□□□□ -1.88
IRC20YLR247C BCK1Q01389 1478 aa3.27□□□□□ -1.89
IRC20YLR247C DIP2Q12220 943 aaPredicted RBP3.27□□□□□ -1.89
IRC20YLR247C CAT8P39113 1433 aa3.23□□□□□ -1.89
IRC20YLR247C HAA1Q12753 694 aaKnown RBP3.22□□□□□ -1.89
IRC20YLR247C STH1P32597 1359 aa3.22□□□□□ -1.89
IRC20YLR247C MET10P39692 1035 aa3.21□□□□□ -1.9
IRC20YLR247C PDR5P33302 1511 aaKnown RBP3.2□□□□□ -1.9
IRC20YLR247C NUP192P47054 1683 aa3.2□□□□□ -1.9
IRC20YLR247C YTA7P40340 1379 aa3.2□□□□□ -1.9
IRC20YLR247C YSP2Q06681 1438 aa3.2□□□□□ -1.9
IRC20YLR247C TSR3Q12094 313 aaKnown RBP3.2□□□□□ -1.9
IRC20YLR247C RRP5Q05022 1729 aaKnown RBP3.19□□□□□ -1.9
IRC20YLR247C NUP157P40064 1391 aaKnown RBP3.19□□□□□ -1.9
IRC20YLR247C GCN2P15442 1659 aa3.18□□□□□ -1.9
IRC20YLR247C BFR2Q06631 534 aaKnown RBP3.18□□□□□ -1.9
IRC20YLR247C REB1P21538 810 aa3.17□□□□□ -1.9
IRC20YLR247C FKS3Q04952 1785 aa3.16□□□□□ -1.9
IRC20YLR247C MRPL32P25348 183 aa3.16□□□□□ -1.9
IRC20YLR247C SNF2P22082 1703 aa3.14□□□□□ -1.91
IRC20YLR247C URB1P34241 1764 aaKnown RBP3.13□□□□□ -1.91
IRC20YLR247C YAH1Q12184 172 aaKnown RBP3.12□□□□□ -1.91
IRC20YLR247C TY4B-HP0C2J7 1802 aa3.12□□□□□ -1.91
IRC20YLR247C TY4B-JP47024 1803 aa3.12□□□□□ -1.91
IRC20YLR247C RPL17AP05740 184 aaKnown RBP3.11□□□□□ -1.91
IRC20YLR247C RPL17BP46990 184 aaKnown RBP3.11□□□□□ -1.91
IRC20YLR247C BNR1P40450 1375 aa3.11□□□□□ -1.91
IRC20YLR247C MAK10Q02197 733 aa3.11□□□□□ -1.91
IRC20YLR247C YRF1-3P0CX14 1859 aa3.11□□□□□ -1.91
IRC20YLR247C YRF1-7P0CX15 1859 aa3.11□□□□□ -1.91
IRC20YLR247C YRF1-6P53819 1859 aa3.11□□□□□ -1.91
IRC20YLR247C YAP3P38749 330 aa3.1□□□□□ -1.91
IRC20YLR247C EDE1P34216 1381 aa3.09□□□□□ -1.91
IRC20YLR247C GLN1P32288 370 aaKnown RBP3.09□□□□□ -1.91
IRC20YLR247C YMR196WQ04336 1088 aa3.08□□□□□ -1.92
IRC20YLR247C CFT1Q06632 1357 aaKnown RBP3.07□□□□□ -1.92
IRC20YLR247C GEA1P47102 1408 aaPredicted RBP3.06□□□□□ -1.92
IRC20YLR247C TY3B-IQ7LHG5 1498 aaKnown RBP3.03□□□□□ -1.92
IRC20YLR247C PTP3P40048 928 aa3.03□□□□□ -1.92
IRC20YLR247C YIL177CP40434 1758 aa3.03□□□□□ -1.92
IRC20YLR247C YJL225CP40889 1758 aa3.03□□□□□ -1.92
IRC20YLR247C RIM15P43565 1770 aa3.02□□□□□ -1.93
IRC20YLR247C RQC2Q12532 1038 aaKnown RBP3.02□□□□□ -1.93
IRC20YLR247C AVT3P36062 692 aa3.01□□□□□ -1.93
IRC20YLR247C YCK3P39962 524 aa3□□□□□ -1.93
IRC20YLR247C YMR074CQ04773 145 aa2.99□□□□□ -1.93
IRC20YLR247C SRB8P25648 1427 aa2.99□□□□□ -1.93
IRC20YLR247C YIL055CP40523 627 aaKnown RBP2.98□□□□□ -1.93
IRC20YLR247C YGL015CP33199 130 aa2.98□□□□□ -1.93
IRC20YLR247C URN1Q06525 465 aaKnown RBP2.98□□□□□ -1.93
IRC20YLR247C THI12P42883 340 aa2.97□□□□□ -1.93
IRC20YLR247C THI5P43534 340 aa2.97□□□□□ -1.93
IRC20YLR247C THI11P47183 340 aa2.97□□□□□ -1.93
IRC20YLR247C THI13Q07748 340 aa2.97□□□□□ -1.93
IRC20YLR247C APC1P53886 1748 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms