RNA–Protein interactions for RNA: YLR146C

SPE4, Transcript of Spermine synthase, yeastyeast

Gene SPE4, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE4YLR146C POL5P39985 1022 aaKnown RBP10.13□□□□□ -0.79
SPE4YLR146C SEC3P33332 1336 aaKnown RBP10.12□□□□□ -0.79
SPE4YLR146C EAP1P36041 632 aaKnown RBP10.12□□□□□ -0.79
SPE4YLR146C TAF2P23255 1407 aa10.1□□□□□ -0.79
SPE4YLR146C PSD2P53037 1138 aaKnown RBP10.09□□□□□ -0.79
SPE4YLR146C YLR271WQ06152 274 aa10.09□□□□□ -0.79
SPE4YLR146C ECM5Q03214 1411 aa10.08□□□□□ -0.8
SPE4YLR146C RTG1P32607 177 aa10.08□□□□□ -0.8
SPE4YLR146C ESP1Q03018 1630 aa10.05□□□□□ -0.8
SPE4YLR146C YOL036WQ08206 761 aa10.04□□□□□ -0.8
SPE4YLR146C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.04□□□□□ -0.8not detected
SPE4YLR146C MRM1P25270 412 aa10.03□□□□□ -0.8
SPE4YLR146C SAS10Q12136 610 aaPredicted RBP10.03□□□□□ -0.8
SPE4YLR146C TRP5P00931 707 aaKnown RBP10.02□□□□□ -0.81
SPE4YLR146C SET4P42948 560 aa10.02□□□□□ -0.81
SPE4YLR146C NCR1Q12200 1170 aa10.02□□□□□ -0.81
SPE4YLR146C SSM4P40318 1319 aa10.01□□□□□ -0.81
SPE4YLR146C MYO4P32492 1471 aa10□□□□□ -0.81
SPE4YLR146C SCC2Q04002 1493 aa10□□□□□ -0.81
SPE4YLR146C BPT1P14772 1559 aa9.99□□□□□ -0.81
SPE4YLR146C SPT7P35177 1332 aa9.99□□□□□ -0.81
SPE4YLR146C TAF7Q05021 590 aa9.98□□□□□ -0.81
SPE4YLR146C YNL035CP53962 389 aaKnown RBP9.97□□□□□ -0.81
SPE4YLR146C SEC61P32915 480 aa9.96□□□□□ -0.82
SPE4YLR146C YPR148CQ06523 435 aa9.96□□□□□ -0.82
SPE4YLR146C SMC4Q12267 1418 aa9.96□□□□□ -0.82
SPE4YLR146C PRS1P32895 427 aaKnown RBP9.94□□□□□ -0.82
SPE4YLR146C MLP2P40457 1679 aa9.93□□□□□ -0.82
SPE4YLR146C DNA2P38859 1522 aa9.92□□□□□ -0.82
SPE4YLR146C PEP1P32319 1579 aa9.9□□□□□ -0.82
SPE4YLR146C YOR1P53049 1477 aa9.9□□□□□ -0.83
SPE4YLR146C YMR1P47147 688 aaKnown RBP RIP-Chip data9.89□□□□□ -0.83not detected
SPE4YLR146C YPK9Q12697 1472 aa9.89□□□□□ -0.83
SPE4YLR146C PAN1P32521 1480 aa9.88□□□□□ -0.83
SPE4YLR146C DBP1P24784 617 aaKnown RBP9.86□□□□□ -0.83
SPE4YLR146C PDR10P51533 1564 aa9.86□□□□□ -0.83
SPE4YLR146C SWR1Q05471 1514 aa9.86□□□□□ -0.83
SPE4YLR146C SNQ2P32568 1501 aaKnown RBP9.85□□□□□ -0.83
SPE4YLR146C VMA1P17255 1071 aaKnown RBP9.84□□□□□ -0.83
SPE4YLR146C VPS29P38759 282 aa9.84□□□□□ -0.83
SPE4YLR146C RKR1Q04781 1562 aa9.84□□□□□ -0.83
SPE4YLR146C BUD4P47136 1447 aa9.83□□□□□ -0.84
SPE4YLR146C MGA2P40578 1113 aa9.83□□□□□ -0.84
SPE4YLR146C SAM3Q08986 587 aa9.83□□□□□ -0.84
SPE4YLR146C RTT106P40161 455 aa9.81□□□□□ -0.84
SPE4YLR146C TFG1P41895 735 aaPredicted RBP9.81□□□□□ -0.84
SPE4YLR146C YFR006WP43590 535 aa9.81□□□□□ -0.84
SPE4YLR146C SRB8P25648 1427 aa9.81□□□□□ -0.84
SPE4YLR146C BCK2P33306 851 aa9.8□□□□□ -0.84
SPE4YLR146C SAP30P38429 201 aa9.78□□□□□ -0.84
SPE4YLR146C YLR419WQ06698 1435 aaKnown RBP9.78□□□□□ -0.84
SPE4YLR146C TSC11P40061 1430 aa9.77□□□□□ -0.85
SPE4YLR146C STS1P38637 319 aa9.77□□□□□ -0.85
SPE4YLR146C DAN4P47179 1161 aa9.77□□□□□ -0.85
SPE4YLR146C GEA1P47102 1408 aaPredicted RBP9.76□□□□□ -0.85
SPE4YLR146C YCF1P39109 1515 aaKnown RBP9.75□□□□□ -0.85
SPE4YLR146C CLC1P17891 233 aa9.74□□□□□ -0.85
SPE4YLR146C CHL1P22516 861 aaPredicted RBP9.73□□□□□ -0.85
SPE4YLR146C IME2P32581 645 aa9.73□□□□□ -0.85
SPE4YLR146C RTG3P38165 486 aa9.73□□□□□ -0.85
SPE4YLR146C TCB2P48231 1178 aa9.73□□□□□ -0.85
SPE4YLR146C JIP4Q03361 876 aa9.73□□□□□ -0.85
SPE4YLR146C CST9Q06032 482 aa9.72□□□□□ -0.85
SPE4YLR146C YDL129WQ07555 291 aa9.71□□□□□ -0.86
SPE4YLR146C PDR15Q04182 1529 aaKnown RBP9.71□□□□□ -0.86
SPE4YLR146C KOG1P38873 1557 aa9.71□□□□□ -0.86
SPE4YLR146C TOP2P06786 1428 aaKnown RBP9.69□□□□□ -0.86
SPE4YLR146C ATG2P53855 1592 aa9.68□□□□□ -0.86
SPE4YLR146C RPO31P04051 1460 aa9.67□□□□□ -0.86
SPE4YLR146C ABP1P15891 592 aaKnown RBP9.67□□□□□ -0.86
SPE4YLR146C SIS2P36024 562 aa9.67□□□□□ -0.86
SPE4YLR146C MNN4P36044 1178 aa9.67□□□□□ -0.86
SPE4YLR146C PRE3P38624 215 aa9.67□□□□□ -0.86
SPE4YLR146C IRC20Q06554 1556 aa9.67□□□□□ -0.86
SPE4YLR146C NUP159P40477 1460 aa9.66□□□□□ -0.86
SPE4YLR146C MHP1P43638 1398 aa9.64□□□□□ -0.87
SPE4YLR146C ULS1Q08562 1619 aa9.63□□□□□ -0.87
SPE4YLR146C CFT1Q06632 1357 aaKnown RBP9.63□□□□□ -0.87
SPE4YLR146C GYP5Q12344 894 aa9.62□□□□□ -0.87
SPE4YLR146C OPY1P38271 328 aa9.61□□□□□ -0.87
SPE4YLR146C IFH1P39520 1085 aa9.61□□□□□ -0.87
SPE4YLR146C EAF7P53911 425 aaKnown RBP9.61□□□□□ -0.87
SPE4YLR146C HTA1P04911 132 aaKnown RBP9.6□□□□□ -0.87
SPE4YLR146C HTA2P04912 132 aa9.6□□□□□ -0.87
SPE4YLR146C TY3B-GQ99315 1547 aa9.59□□□□□ -0.87
SPE4YLR146C RPC31P17890 251 aa9.58□□□□□ -0.88
SPE4YLR146C VPS15P22219 1454 aa9.58□□□□□ -0.88
SPE4YLR146C ESC1Q03661 1658 aaKnown RBP9.58□□□□□ -0.88
SPE4YLR146C TY1B-DR3Q99231 1755 aa9.56□□□□□ -0.88
SPE4YLR146C LEU3P08638 886 aa9.56□□□□□ -0.88
SPE4YLR146C PTC4P38089 393 aa9.56□□□□□ -0.88
SPE4YLR146C PDR5P33302 1511 aaKnown RBP9.56□□□□□ -0.88
SPE4YLR146C DNF1P32660 1571 aa9.55□□□□□ -0.88
SPE4YLR146C DCW1P36091 449 aa9.55□□□□□ -0.88
SPE4YLR146C RCR1P38212 213 aa9.55□□□□□ -0.88
SPE4YLR146C YEL023CP39992 682 aa9.55□□□□□ -0.88
SPE4YLR146C YFR016CP43597 1233 aaKnown RBP9.54□□□□□ -0.88
SPE4YLR146C GCN2P15442 1659 aa9.52□□□□□ -0.89
SPE4YLR146C SNF7P39929 240 aaKnown RBP9.52□□□□□ -0.89
SPE4YLR146C XDJ1P39102 459 aa9.51□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms