RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W TY1B-MR1Q04214 1755 aa9.5□□□□□ -0.89
LDB18YLL049W TY1B-MR2Q04670 1755 aaKnown RBP9.5□□□□□ -0.89
LDB18YLL049W TY1B-LR1Q12088 1755 aaKnown RBP9.5□□□□□ -0.89
LDB18YLL049W TY1B-NL1Q12112 1755 aa9.5□□□□□ -0.89
LDB18YLL049W TY1B-GR1Q12141 1755 aa9.5□□□□□ -0.89
LDB18YLL049W TY1B-BLQ12490 1755 aa9.5□□□□□ -0.89
LDB18YLL049W NTE1Q04958 1679 aa9.45□□□□□ -0.9
LDB18YLL049W RPO21P04050 1733 aaKnown RBP9.42□□□□□ -0.9
LDB18YLL049W SPP41P38904 1435 aa9.4□□□□□ -0.9
LDB18YLL049W YOR093CQ12275 1648 aa9.38□□□□□ -0.91
LDB18YLL049W YCK3P39962 524 aa9.38□□□□□ -0.91
LDB18YLL049W SMC4Q12267 1418 aa9.38□□□□□ -0.91
LDB18YLL049W POL1P13382 1468 aa9.36□□□□□ -0.91
LDB18YLL049W TSC11P40061 1430 aa9.35□□□□□ -0.91
LDB18YLL049W NUP170P38181 1502 aa9.35□□□□□ -0.91
LDB18YLL049W VTH1P40438 1549 aa9.34□□□□□ -0.91
LDB18YLL049W VTH2P40890 1549 aa9.34□□□□□ -0.91
LDB18YLL049W YOR1P53049 1477 aa9.33□□□□□ -0.92
LDB18YLL049W SNT2P53127 1403 aa9.31□□□□□ -0.92
LDB18YLL049W SPO14P36126 1683 aa9.3□□□□□ -0.92
LDB18YLL049W DOP1Q03921 1698 aa9.27□□□□□ -0.93
LDB18YLL049W HAA1Q12753 694 aaKnown RBP9.27□□□□□ -0.93
LDB18YLL049W STU1P38198 1513 aa9.25□□□□□ -0.93
LDB18YLL049W MYO4P32492 1471 aa9.24□□□□□ -0.93
LDB18YLL049W ULS1Q08562 1619 aa9.22□□□□□ -0.93
LDB18YLL049W BFR2Q06631 534 aaKnown RBP9.21□□□□□ -0.94
LDB18YLL049W ISW2Q08773 1120 aa9.21□□□□□ -0.94
LDB18YLL049W SNQ2P32568 1501 aaKnown RBP9.2□□□□□ -0.94
LDB18YLL049W MET10P39692 1035 aa9.18□□□□□ -0.94
LDB18YLL049W PDR12Q02785 1511 aa9.15□□□□□ -0.94
LDB18YLL049W RPG1P38249 964 aaKnown RBP9.15□□□□□ -0.94
LDB18YLL049W TRM3Q07527 1436 aa9.14□□□□□ -0.95
LDB18YLL049W IQG1Q12280 1495 aa9.09□□□□□ -0.95
LDB18YLL049W PDR10P51533 1564 aa9.09□□□□□ -0.95
LDB18YLL049W GDB1Q06625 1536 aa9.07□□□□□ -0.96
LDB18YLL049W DNF3Q12674 1656 aa9.06□□□□□ -0.96
LDB18YLL049W TFA1P36100 482 aa9.05□□□□□ -0.96
LDB18YLL049W PDR15Q04182 1529 aaKnown RBP9.05□□□□□ -0.96
LDB18YLL049W ARO1P08566 1588 aaKnown RBP9.04□□□□□ -0.96
LDB18YLL049W TSR3Q12094 313 aaKnown RBP9.04□□□□□ -0.96
LDB18YLL049W STH1P32597 1359 aa9.01□□□□□ -0.97
LDB18YLL049W BUD3P25558 1636 aa9.01□□□□□ -0.97
LDB18YLL049W CHC1P22137 1653 aaKnown RBP9□□□□□ -0.97
LDB18YLL049W MLP2P40457 1679 aa8.99□□□□□ -0.97
LDB18YLL049W NUP157P40064 1391 aaKnown RBP8.99□□□□□ -0.97
LDB18YLL049W YTA7P40340 1379 aa8.99□□□□□ -0.97
LDB18YLL049W RTT106P40161 455 aa8.96□□□□□ -0.98
LDB18YLL049W SEC7P11075 2009 aaKnown RBP8.87□□□□□ -0.99
LDB18YLL049W YAP3P38749 330 aa8.87□□□□□ -0.99
LDB18YLL049W USO1P25386 1790 aa8.86□□□□□ -0.99
LDB18YLL049W TY3B-GQ99315 1547 aa8.85□□□□□ -0.99
LDB18YLL049W MAK10Q02197 733 aa8.85□□□□□ -0.99
LDB18YLL049W BNR1P40450 1375 aa8.76□□□□□ -1.01
LDB18YLL049W YSP2Q06681 1438 aa8.76□□□□□ -1.01
LDB18YLL049W DIP2Q12220 943 aaPredicted RBP8.7□□□□□ -1.02
LDB18YLL049W AVT3P36062 692 aa8.68□□□□□ -1.02
LDB18YLL049W MRPL32P25348 183 aa8.67□□□□□ -1.02
LDB18YLL049W GLN1P32288 370 aaKnown RBP8.66□□□□□ -1.02
LDB18YLL049W THI12P42883 340 aa8.66□□□□□ -1.02
LDB18YLL049W THI5P43534 340 aa8.66□□□□□ -1.02
LDB18YLL049W THI11P47183 340 aa8.66□□□□□ -1.02
LDB18YLL049W THI13Q07748 340 aa8.66□□□□□ -1.02
LDB18YLL049W TY1B-NL2Q99337 1749 aaKnown RBP8.66□□□□□ -1.02
LDB18YLL049W YMR196WQ04336 1088 aa8.65□□□□□ -1.02
LDB18YLL049W CAT8P39113 1433 aa8.63□□□□□ -1.03
LDB18YLL049W YBT1P32386 1661 aa8.63□□□□□ -1.03
LDB18YLL049W URN1Q06525 465 aaKnown RBP8.63□□□□□ -1.03
LDB18YLL049W HAP1P0CE41 1502 aa8.62□□□□□ -1.03
LDB18YLL049W NUP188P52593 1655 aaKnown RBP8.6□□□□□ -1.03
LDB18YLL049W IML1P47170 1584 aa8.59□□□□□ -1.03
LDB18YLL049W YAH1Q12184 172 aaKnown RBP8.58□□□□□ -1.04
LDB18YLL049W CKB1P43639 278 aa8.53□□□□□ -1.04
LDB18YLL049W IPL1P38991 367 aa8.52□□□□□ -1.05
LDB18YLL049W IFH1P39520 1085 aa8.52□□□□□ -1.05
LDB18YLL049W TAF7Q05021 590 aa8.51□□□□□ -1.05
LDB18YLL049W GEA1P47102 1408 aaPredicted RBP8.51□□□□□ -1.05
LDB18YLL049W YIL055CP40523 627 aaKnown RBP8.5□□□□□ -1.05
LDB18YLL049W SAS10Q12136 610 aaPredicted RBP8.5□□□□□ -1.05
LDB18YLL049W VMR1P38735 1592 aa8.49□□□□□ -1.05
LDB18YLL049W YGL015CP33199 130 aa8.47□□□□□ -1.05
LDB18YLL049W APP1P53933 587 aa8.46□□□□□ -1.06
LDB18YLL049W TYS1P36421 394 aaKnown RBP8.45□□□□□ -1.06
LDB18YLL049W PTP3P40048 928 aa8.4□□□□□ -1.06
LDB18YLL049W YMR074CQ04773 145 aa8.39□□□□□ -1.07
LDB18YLL049W REB1P21538 810 aa8.35□□□□□ -1.07
LDB18YLL049W BCK1Q01389 1478 aa8.34□□□□□ -1.07
LDB18YLL049W RPL17AP05740 184 aaKnown RBP8.34□□□□□ -1.07
LDB18YLL049W RPL17BP46990 184 aaKnown RBP8.34□□□□□ -1.07
LDB18YLL049W SRB8P25648 1427 aa8.34□□□□□ -1.07
LDB18YLL049W PDR11P40550 1411 aa8.29□□□□□ -1.08
LDB18YLL049W PDR5P33302 1511 aaKnown RBP8.29□□□□□ -1.08
LDB18YLL049W CFT1Q06632 1357 aaKnown RBP8.25□□□□□ -1.09
LDB18YLL049W BUD21Q08492 214 aaPredicted RBP8.25□□□□□ -1.09
LDB18YLL049W ENT1Q12518 454 aa8.24□□□□□ -1.09
LDB18YLL049W BUD31P25337 157 aaPredicted RBP8.23□□□□□ -1.09
LDB18YLL049W ENV9Q08651 330 aa8.21□□□□□ -1.1
LDB18YLL049W KRE5P22023 1365 aa8.21□□□□□ -1.1
LDB18YLL049W YNR029CP53729 429 aaKnown RBP8.2□□□□□ -1.1
LDB18YLL049W RIA1P53893 1110 aa8.17□□□□□ -1.1
LDB18YLL049W IMH1Q06704 911 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms