RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C CDC25P04821 1589 aa6.49□□□□□ -1.37
SGN1YIR001C PTP3P40048 928 aa6.49□□□□□ -1.37
SGN1YIR001C IOC2Q12072 812 aa6.49□□□□□ -1.37
SGN1YIR001C MET5P47169 1442 aa6.49□□□□□ -1.37
SGN1YIR001C TY1B-BRQ12193 1756 aa6.49□□□□□ -1.37
SGN1YIR001C TY1B-GR3Q12316 1755 aa6.49□□□□□ -1.37
SGN1YIR001C TY1B-ORQ92393 1755 aa6.49□□□□□ -1.37
SGN1YIR001C SCC2Q04002 1493 aa6.47□□□□□ -1.37
SGN1YIR001C ULI1P43604 169 aa6.47□□□□□ -1.37
SGN1YIR001C CHD1P32657 1468 aa6.46□□□□□ -1.38
SGN1YIR001C YPK9Q12697 1472 aa6.46□□□□□ -1.38
SGN1YIR001C RPA190P10964 1664 aaKnown RBP6.45□□□□□ -1.38
SGN1YIR001C DNF1P32660 1571 aa6.44□□□□□ -1.38
SGN1YIR001C RPO31P04051 1460 aa6.43□□□□□ -1.38
SGN1YIR001C RSM7P47150 247 aa6.43□□□□□ -1.38
SGN1YIR001C LTE1P07866 1435 aa6.42□□□□□ -1.38
SGN1YIR001C RKR1Q04781 1562 aa6.42□□□□□ -1.38
SGN1YIR001C BNI1P41832 1953 aa6.42□□□□□ -1.38
SGN1YIR001C TY1B-HO13535 1793 aa6.41□□□□□ -1.38
SGN1YIR001C TY1B-DR5P0C2I2 1755 aa6.41□□□□□ -1.38
SGN1YIR001C TY1B-DR6P0C2I3 1755 aa6.41□□□□□ -1.38
SGN1YIR001C TY1B-LR2P0C2I5 1755 aa6.41□□□□□ -1.38
SGN1YIR001C TY1B-LR3P0C2I6 1755 aaKnown RBP6.41□□□□□ -1.38
SGN1YIR001C TY1B-PR1P0C2I9 1755 aaKnown RBP6.41□□□□□ -1.38
SGN1YIR001C TY1B-PR2P0C2J0 1756 aa6.41□□□□□ -1.38
SGN1YIR001C TY1B-PR3P0C2J1 1755 aaKnown RBP6.41□□□□□ -1.38
SGN1YIR001C TY1B-JR1P47098 1755 aa6.41□□□□□ -1.38
SGN1YIR001C TY1B-ML2Q03434 1755 aaKnown RBP6.41□□□□□ -1.38
SGN1YIR001C TY1B-ER1Q03612 1755 aa6.41□□□□□ -1.38
SGN1YIR001C TY1B-ML1Q04711 1755 aaKnown RBP6.41□□□□□ -1.38
SGN1YIR001C TY1B-GR2Q12269 1755 aa6.41□□□□□ -1.38
SGN1YIR001C TY1B-OLQ12273 1755 aa6.41□□□□□ -1.38
SGN1YIR001C TY1B-PLQ12414 1755 aaKnown RBP6.41□□□□□ -1.38
SGN1YIR001C TY2B-BQ12491 1770 aa6.41□□□□□ -1.38
SGN1YIR001C GTT3P39996 337 aa6.41□□□□□ -1.38
SGN1YIR001C PAN1P32521 1480 aa6.41□□□□□ -1.38
SGN1YIR001C ABP1P15891 592 aaKnown RBP6.4□□□□□ -1.38
SGN1YIR001C YAH1Q12184 172 aaKnown RBP6.4□□□□□ -1.38
SGN1YIR001C TY1B-DR3Q99231 1755 aa6.39□□□□□ -1.39
SGN1YIR001C SSP1P38871 571 aa6.38□□□□□ -1.39
SGN1YIR001C BBC1P47068 1157 aa6.38□□□□□ -1.39
SGN1YIR001C ITT1Q04638 464 aa6.37□□□□□ -1.39
SGN1YIR001C GEA2P39993 1459 aaKnown RBP6.36□□□□□ -1.39
SGN1YIR001C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
SGN1YIR001C BCK2P33306 851 aa6.35□□□□□ -1.39
SGN1YIR001C TOP2P06786 1428 aaKnown RBP6.33□□□□□ -1.4
SGN1YIR001C AI2P03876 854 aa6.33□□□□□ -1.4
SGN1YIR001C YFR006WP43590 535 aa6.33□□□□□ -1.4
SGN1YIR001C YLR271WQ06152 274 aa6.33□□□□□ -1.4
SGN1YIR001C YRF1-1P0CX20 1796 aa6.33□□□□□ -1.4
SGN1YIR001C YRF1-5P0CX21 1796 aa6.33□□□□□ -1.4
SGN1YIR001C YRF1-8P0CX22 1796 aa6.33□□□□□ -1.4
SGN1YIR001C RGA1P39083 1007 aa6.32□□□□□ -1.4
SGN1YIR001C MMS22Q06164 1454 aa6.32□□□□□ -1.4
SGN1YIR001C TRM732Q03496 1420 aa6.32□□□□□ -1.4
SGN1YIR001C RTG1P32607 177 aa6.3□□□□□ -1.4
SGN1YIR001C NCR1Q12200 1170 aa6.3□□□□□ -1.4
SGN1YIR001C MMS1Q06211 1407 aa6.3□□□□□ -1.4
SGN1YIR001C TY1B-JR2P47100 1755 aaKnown RBP6.29□□□□□ -1.4
SGN1YIR001C TY1B-ER2Q03619 1755 aa6.29□□□□□ -1.4
SGN1YIR001C TY1B-MR1Q04214 1755 aa6.29□□□□□ -1.4
SGN1YIR001C TY1B-MR2Q04670 1755 aaKnown RBP6.29□□□□□ -1.4
SGN1YIR001C TY1B-LR1Q12088 1755 aaKnown RBP6.29□□□□□ -1.4
SGN1YIR001C TY1B-NL1Q12112 1755 aa6.29□□□□□ -1.4
SGN1YIR001C TY1B-GR1Q12141 1755 aa6.29□□□□□ -1.4
SGN1YIR001C TY1B-BLQ12490 1755 aa6.29□□□□□ -1.4
SGN1YIR001C DRS2P39524 1355 aa6.26□□□□□ -1.41
SGN1YIR001C NUP159P40477 1460 aa6.24□□□□□ -1.41
SGN1YIR001C PSD2P53037 1138 aaKnown RBP6.24□□□□□ -1.41
SGN1YIR001C NTE1Q04958 1679 aa6.23□□□□□ -1.41
SGN1YIR001C EAP1P36041 632 aaKnown RBP6.23□□□□□ -1.41
SGN1YIR001C VPS15P22219 1454 aa6.22□□□□□ -1.41
SGN1YIR001C RPO21P04050 1733 aaKnown RBP6.22□□□□□ -1.41
SGN1YIR001C MGA2P40578 1113 aa6.21□□□□□ -1.42
SGN1YIR001C MSB4Q12317 492 aa6.21□□□□□ -1.42
SGN1YIR001C SPP41P38904 1435 aa6.21□□□□□ -1.42
SGN1YIR001C IRC20Q06554 1556 aa6.21□□□□□ -1.42
SGN1YIR001C POL1P13382 1468 aa6.21□□□□□ -1.42
SGN1YIR001C SMC4Q12267 1418 aa6.2□□□□□ -1.42
SGN1YIR001C DNF2Q12675 1612 aa6.19□□□□□ -1.42
SGN1YIR001C STU1P38198 1513 aa6.19□□□□□ -1.42
SGN1YIR001C YOR1P53049 1477 aa6.18□□□□□ -1.42
SGN1YIR001C SEC61P32915 480 aa6.18□□□□□ -1.42
SGN1YIR001C VTH1P40438 1549 aa6.17□□□□□ -1.42
SGN1YIR001C VTH2P40890 1549 aa6.17□□□□□ -1.42
SGN1YIR001C TSC11P40061 1430 aa6.16□□□□□ -1.42
SGN1YIR001C CHL1P22516 861 aaPredicted RBP6.15□□□□□ -1.42
SGN1YIR001C YNL035CP53962 389 aaKnown RBP6.15□□□□□ -1.42
SGN1YIR001C NUP170P38181 1502 aa6.15□□□□□ -1.43
SGN1YIR001C TRP5P00931 707 aaKnown RBP6.14□□□□□ -1.43
SGN1YIR001C MET10P39692 1035 aa6.12□□□□□ -1.43
SGN1YIR001C SPO14P36126 1683 aa6.11□□□□□ -1.43
SGN1YIR001C MYO4P32492 1471 aa6.11□□□□□ -1.43
SGN1YIR001C ULS1Q08562 1619 aa6.1□□□□□ -1.43
SGN1YIR001C XDJ1P39102 459 aa6.1□□□□□ -1.43
SGN1YIR001C PIB1Q06651 286 aa6.1□□□□□ -1.43
SGN1YIR001C DOP1Q03921 1698 aa6.1□□□□□ -1.43
SGN1YIR001C MRM1P25270 412 aa6.09□□□□□ -1.43
SGN1YIR001C SAP30P38429 201 aa6.09□□□□□ -1.43
SGN1YIR001C RTT106P40161 455 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms