RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeastyeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DBF4YDR052C IFH1P39520 1085 aa6.38□□□□□ -1.39
DBF4YDR052C GRX3Q03835 250 aa6.38□□□□□ -1.39
DBF4YDR052C SIC1P38634 284 aa6.38□□□□□ -1.39
DBF4YDR052C YPP1P46951 817 aa6.38□□□□□ -1.39
DBF4YDR052C YLR419WQ06698 1435 aaKnown RBP6.38□□□□□ -1.39
DBF4YDR052C SMC3P47037 1230 aa6.37□□□□□ -1.39
DBF4YDR052C PSD2P53037 1138 aaKnown RBP6.37□□□□□ -1.39
DBF4YDR052C ETT1Q08421 412 aaKnown RBP6.37□□□□□ -1.39
DBF4YDR052C MSH3P25336 1018 aa6.37□□□□□ -1.39
DBF4YDR052C RPG1P38249 964 aaKnown RBP6.37□□□□□ -1.39
DBF4YDR052C DJP1P40564 432 aa6.37□□□□□ -1.39
DBF4YDR052C PIL1P53252 339 aaKnown RBP6.37□□□□□ -1.39
DBF4YDR052C DOS2P54858 310 aa6.35□□□□□ -1.39
DBF4YDR052C SPT6P23615 1451 aaKnown RBP6.34□□□□□ -1.39
DBF4YDR052C MYO4P32492 1471 aa6.34□□□□□ -1.39
DBF4YDR052C CLB5P30283 435 aa6.34□□□□□ -1.4
DBF4YDR052C RPN1P38764 993 aaKnown RBP6.34□□□□□ -1.4
DBF4YDR052C YIR014WP40570 242 aa6.34□□□□□ -1.4
DBF4YDR052C MSH4P40965 878 aaPredicted RBP6.34□□□□□ -1.4
DBF4YDR052C MYO2P19524 1574 aaKnown RBP6.32□□□□□ -1.4
DBF4YDR052C NUP170P38181 1502 aa6.32□□□□□ -1.4
DBF4YDR052C THO2P53552 1597 aaKnown RBP6.31□□□□□ -1.4
DBF4YDR052C NOT3P06102 836 aaKnown RBP6.31□□□□□ -1.4
DBF4YDR052C PRP3Q03338 469 aaPredicted RBP6.31□□□□□ -1.4
DBF4YDR052C ECM16Q04217 1267 aaKnown RBP6.31□□□□□ -1.4
DBF4YDR052C BMS1Q08965 1183 aaKnown RBP6.31□□□□□ -1.4
DBF4YDR052C YPK9Q12697 1472 aa6.31□□□□□ -1.4
DBF4YDR052C DSN1P40568 576 aa6.31□□□□□ -1.4
DBF4YDR052C NNF2P53253 936 aa6.31□□□□□ -1.4
DBF4YDR052C BYE1P36106 594 aa6.3□□□□□ -1.4
DBF4YDR052C KNS1P32350 737 aaPredicted RBP6.29□□□□□ -1.4
DBF4YDR052C MED8P38304 223 aa6.29□□□□□ -1.4
DBF4YDR052C TIF4632P39936 914 aaKnown RBP6.29□□□□□ -1.4
DBF4YDR052C EDE1P34216 1381 aa6.29□□□□□ -1.4
DBF4YDR052C PCT1P13259 424 aa6.28□□□□□ -1.4
DBF4YDR052C ABP1P15891 592 aaKnown RBP6.28□□□□□ -1.4
DBF4YDR052C MLP2P40457 1679 aa6.27□□□□□ -1.41
DBF4YDR052C RPN7Q06103 429 aaKnown RBP6.27□□□□□ -1.41
DBF4YDR052C LTV1P34078 463 aa6.26□□□□□ -1.41
DBF4YDR052C ECM1P39715 212 aa6.26□□□□□ -1.41
DBF4YDR052C MSP1P28737 362 aa6.26□□□□□ -1.41
DBF4YDR052C SMC4Q12267 1418 aa6.25□□□□□ -1.41
DBF4YDR052C TAF2P23255 1407 aa6.25□□□□□ -1.41
DBF4YDR052C ARL1P38116 183 aaKnown RBP6.24□□□□□ -1.41
DBF4YDR052C NOP8Q08287 484 aaPredicted RBP6.24□□□□□ -1.41
DBF4YDR052C TAN1P53072 289 aaPredicted RBP6.23□□□□□ -1.41
DBF4YDR052C KIP3P53086 805 aaKnown RBP6.23□□□□□ -1.41
DBF4YDR052C YSH1Q06224 779 aaPredicted RBP6.23□□□□□ -1.41
DBF4YDR052C IRC20Q06554 1556 aa6.23□□□□□ -1.41
DBF4YDR052C SAP190P36123 1033 aa6.23□□□□□ -1.41
DBF4YDR052C PAP2P53632 584 aaKnown RBP6.23□□□□□ -1.41
DBF4YDR052C STU1P38198 1513 aa6.23□□□□□ -1.41
DBF4YDR052C SNU71P53207 620 aaKnown RBP6.22□□□□□ -1.41
DBF4YDR052C NST1P53935 1240 aa6.22□□□□□ -1.41
DBF4YDR052C VPS24P36095 224 aaKnown RBP6.22□□□□□ -1.41
DBF4YDR052C RAD2P07276 1031 aa6.21□□□□□ -1.42
DBF4YDR052C SRP54P20424 541 aaKnown RBP6.21□□□□□ -1.42
DBF4YDR052C MDG1P53885 366 aa6.2□□□□□ -1.42
DBF4YDR052C SCC2Q04002 1493 aa6.2□□□□□ -1.42
DBF4YDR052C CLB1P24868 471 aa6.2□□□□□ -1.42
DBF4YDR052C CBF5P33322 483 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
DBF4YDR052C TPM2P40414 161 aa6.2□□□□□ -1.42
DBF4YDR052C RSC1P53236 928 aa6.2□□□□□ -1.42
DBF4YDR052C REV3P14284 1504 aa6.2□□□□□ -1.42
DBF4YDR052C DNA2P38859 1522 aa6.2□□□□□ -1.42
DBF4YDR052C RIM101P33400 625 aa6.19□□□□□ -1.42
DBF4YDR052C CIN4P39110 191 aa6.19□□□□□ -1.42
DBF4YDR052C NOP14Q99207 810 aaKnown RBP6.19□□□□□ -1.42
DBF4YDR052C RAD51P25454 400 aa6.19□□□□□ -1.42
DBF4YDR052C DEP1P31385 405 aa6.19□□□□□ -1.42
DBF4YDR052C RPS0AP32905 252 aaKnown RBP6.19□□□□□ -1.42
DBF4YDR052C RRP14P36080 434 aaKnown RBP6.19□□□□□ -1.42
DBF4YDR052C TY1B-DR4Q07793 1604 aa6.19□□□□□ -1.42
DBF4YDR052C PAN1P32521 1480 aa6.18□□□□□ -1.42
DBF4YDR052C CHZ1P40019 153 aaPredicted RBP6.18□□□□□ -1.42
DBF4YDR052C TLG1Q03322 224 aa6.18□□□□□ -1.42
DBF4YDR052C VPS60Q03390 229 aa6.17□□□□□ -1.42
DBF4YDR052C BPT1P14772 1559 aa6.17□□□□□ -1.42
DBF4YDR052C TRM3Q07527 1436 aa6.17□□□□□ -1.42
DBF4YDR052C RSC8P43609 557 aaKnown RBP6.17□□□□□ -1.42
DBF4YDR052C TSR3Q12094 313 aaKnown RBP6.17□□□□□ -1.42
DBF4YDR052C UTP13Q05946 817 aaKnown RBP6.16□□□□□ -1.42
DBF4YDR052C SIN3P22579 1536 aa6.16□□□□□ -1.42
DBF4YDR052C MHP1P43638 1398 aa6.16□□□□□ -1.42
DBF4YDR052C SPB4P25808 606 aaPredicted RBP6.16□□□□□ -1.42
DBF4YDR052C TEA1P47988 759 aa6.16□□□□□ -1.42
DBF4YDR052C UBP10P53874 792 aaPredicted RBP6.16□□□□□ -1.42
DBF4YDR052C VPS72Q03388 795 aa6.16□□□□□ -1.42
DBF4YDR052C HAA1Q12753 694 aaKnown RBP6.16□□□□□ -1.42
DBF4YDR052C NHA1Q99271 985 aa6.16□□□□□ -1.42
DBF4YDR052C RVB2Q12464 471 aaKnown RBP6.15□□□□□ -1.42
DBF4YDR052C TY1B-AO13527 1196 aaKnown RBP6.14□□□□□ -1.43
DBF4YDR052C SUP35P05453 685 aaKnown RBP6.14□□□□□ -1.43
DBF4YDR052C SSA1P10591 642 aaKnown RBP6.14□□□□□ -1.43
DBF4YDR052C SSA2P10592 639 aaKnown RBP6.14□□□□□ -1.43
DBF4YDR052C SWI3P32591 825 aa6.14□□□□□ -1.43
DBF4YDR052C TCD1P38756 429 aa6.14□□□□□ -1.43
DBF4YDR052C YCK3P39962 524 aa6.14□□□□□ -1.43
DBF4YDR052C RNT1Q02555 471 aa6.14□□□□□ -1.43
DBF4YDR052C RRP15Q06511 250 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms