RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HBT1	YDL223C	PKC1	P24583	1151 aa		5.16	□□□□□ -1.58
HBT1	YDL223C	UBP10	P53874	792 aa	Predicted RBP	5.16	□□□□□ -1.58
HBT1	YDL223C	UBP14	P38237	781 aa	Known RBP	5.15	□□□□□ -1.58
HBT1	YDL223C	TFB3	Q03290	321 aa		5.15	□□□□□ -1.58
HBT1	YDL223C	PIB1	Q06651	286 aa		5.15	□□□□□ -1.59
HBT1	YDL223C	SPA2	P23201	1466 aa	Known RBP	5.15	□□□□□ -1.59
HBT1	YDL223C	HIR3	P47171	1648 aa		5.14	□□□□□ -1.59
HBT1	YDL223C	SLX5	P32828	619 aa	Known RBP	5.14	□□□□□ -1.59
HBT1	YDL223C	VHR2	P40041	505 aa		5.14	□□□□□ -1.59
HBT1	YDL223C	YOR238W	Q08634	303 aa		5.13	□□□□□ -1.59
HBT1	YDL223C	ATF2	P53296	535 aa		5.11	□□□□□ -1.59
HBT1	YDL223C	YLR326W	Q06170	240 aa	Known RBP	5.11	□□□□□ -1.59
HBT1	YDL223C	GLN1	P32288	370 aa	Known RBP	5.1	□□□□□ -1.59
HBT1	YDL223C	HPC2	Q01448	625 aa		5.1	□□□□□ -1.59
HBT1	YDL223C	THO2	P53552	1597 aa	Known RBP	5.1	□□□□□ -1.59
HBT1	YDL223C	MAK21	Q12176	1025 aa	Known RBP	5.1	□□□□□ -1.59
HBT1	YDL223C	KTR1	P27810	393 aa	Known RBP	5.09	□□□□□ -1.59
HBT1	YDL223C	ECM5	Q03214	1411 aa		5.09	□□□□□ -1.59
HBT1	YDL223C	SOL3	P38858	249 aa		5.09	□□□□□ -1.59
HBT1	YDL223C	VMA1	P17255	1071 aa	Known RBP	5.07	□□□□□ -1.6
HBT1	YDL223C	YML020W	Q03722	664 aa		5.07	□□□□□ -1.6
HBT1	YDL223C	BUD4	P47136	1447 aa		5.07	□□□□□ -1.6
HBT1	YDL223C	ATG32	P40458	529 aa		5.06	□□□□□ -1.6
HBT1	YDL223C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
HBT1	YDL223C	SUB2	Q07478	446 aa	Known RBP	5.06	□□□□□ -1.6
HBT1	YDL223C	BIM1	P40013	344 aa		5.06	□□□□□ -1.6
HBT1	YDL223C	ERG12	P07277	443 aa		5.05	□□□□□ -1.6
HBT1	YDL223C	TYW1	Q08960	810 aa	Known RBP	5.04	□□□□□ -1.6
HBT1	YDL223C	MDS3	P53094	1487 aa		5.03	□□□□□ -1.6
HBT1	YDL223C	YJL007C	P47080	104 aa		5.03	□□□□□ -1.6
HBT1	YDL223C	YGR273C	P53329	174 aa		5.03	□□□□□ -1.6
HBT1	YDL223C	CSN12	P47130	423 aa		5.03	□□□□□ -1.6
HBT1	YDL223C	NST1	P53935	1240 aa		5.03	□□□□□ -1.6
HBT1	YDL223C	NOP8	Q08287	484 aa	Predicted RBP	5.03	□□□□□ -1.6
HBT1	YDL223C	KEX1	P09620	729 aa		5.02	□□□□□ -1.61
HBT1	YDL223C	XRN1	P22147	1528 aa	Known RBP	5.02	□□□□□ -1.61
HBT1	YDL223C	ILV3	P39522	585 aa	Known RBP	5.01	□□□□□ -1.61
HBT1	YDL223C	PEP1	P32319	1579 aa		5.01	□□□□□ -1.61
HBT1	YDL223C	YGL015C	P33199	130 aa		5.01	□□□□□ -1.61
HBT1	YDL223C	ORC6	P38826	435 aa		5.01	□□□□□ -1.61
HBT1	YDL223C	HGH1	P48362	394 aa	Known RBP	5.01	□□□□□ -1.61
HBT1	YDL223C	GUT1	P32190	709 aa		5	□□□□□ -1.61
HBT1	YDL223C	ATH1	P48016	1211 aa		5	□□□□□ -1.61
HBT1	YDL223C	PSE1	P32337	1089 aa	Known RBP	5	□□□□□ -1.61
HBT1	YDL223C	GRE2	Q12068	342 aa	Known RBP	5	□□□□□ -1.61
HBT1	YDL223C	BRL1	P38770	471 aa		4.99	□□□□□ -1.61
HBT1	YDL223C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
HBT1	YDL223C	SSA1	P10591	642 aa	Known RBP	4.98	□□□□□ -1.61
HBT1	YDL223C	BIO2	P32451	375 aa		4.98	□□□□□ -1.61
HBT1	YDL223C	GEF1	P37020	779 aa		4.98	□□□□□ -1.61
HBT1	YDL223C	SLX8	P40072	274 aa		4.98	□□□□□ -1.61
HBT1	YDL223C	ATG2	P53855	1592 aa		4.98	□□□□□ -1.61
HBT1	YDL223C	TIF1	P10081	395 aa	Known RBP	4.98	□□□□□ -1.61
HBT1	YDL223C	RAD54	P32863	898 aa		4.98	□□□□□ -1.61
HBT1	YDL223C	YAP5	P40574	245 aa		4.97	□□□□□ -1.61
HBT1	YDL223C	SAM3	Q08986	587 aa		4.97	□□□□□ -1.61
HBT1	YDL223C	RGR1	P19263	1082 aa		4.97	□□□□□ -1.61
HBT1	YDL223C	SCJ1	P25303	377 aa		4.96	□□□□□ -1.62
HBT1	YDL223C	CPS1	P27614	576 aa		4.96	□□□□□ -1.62
HBT1	YDL223C	NIS1	P53939	407 aa		4.95	□□□□□ -1.62
HBT1	YDL223C	SSA2	P10592	639 aa	Known RBP	4.95	□□□□□ -1.62
HBT1	YDL223C	NOB1	Q08444	459 aa	Known RBP	4.95	□□□□□ -1.62
HBT1	YDL223C	KIC1	P38692	1080 aa		4.94	□□□□□ -1.62
HBT1	YDL223C	REV3	P14284	1504 aa		4.94	□□□□□ -1.62
HBT1	YDL223C	TEA1	P47988	759 aa		4.94	□□□□□ -1.62
HBT1	YDL223C	MVP1	P40959	511 aa	Known RBP	4.93	□□□□□ -1.62
HBT1	YDL223C	GYP5	Q12344	894 aa		4.93	□□□□□ -1.62
HBT1	YDL223C	TTI1	P36097	1038 aa		4.93	□□□□□ -1.62
HBT1	YDL223C	GAP1	P19145	602 aa	Predicted RBP	4.92	□□□□□ -1.62
HBT1	YDL223C	YML083C	Q04526	418 aa		4.92	□□□□□ -1.62
HBT1	YDL223C	SSN2	P38931	1420 aa		4.92	□□□□□ -1.62
HBT1	YDL223C	YJU3	P28321	313 aa		4.92	□□□□□ -1.62
HBT1	YDL223C	FPK1	P53739	893 aa		4.92	□□□□□ -1.62
HBT1	YDL223C	YPR204W	Q08995	1032 aa		4.92	□□□□□ -1.62
HBT1	YDL223C	ESS1	P22696	170 aa		4.92	□□□□□ -1.62
HBT1	YDL223C	DCW1	P36091	449 aa		4.92	□□□□□ -1.62
HBT1	YDL223C	YNL108C	P53929	270 aa		4.91	□□□□□ -1.62
HBT1	YDL223C	SIN3	P22579	1536 aa		4.9	□□□□□ -1.62
HBT1	YDL223C	YBL036C	P38197	257 aa		4.9	□□□□□ -1.63
HBT1	YDL223C	BPT1	P14772	1559 aa		4.9	□□□□□ -1.63
HBT1	YDL223C	ORC1	P54784	914 aa	Predicted RBP	4.9	□□□□□ -1.63
HBT1	YDL223C	RAD59	Q12223	238 aa		4.9	□□□□□ -1.63
HBT1	YDL223C	SSK2	P53599	1579 aa		4.89	□□□□□ -1.63
HBT1	YDL223C	RTG2	P32608	588 aa	Known RBP	4.89	□□□□□ -1.63
HBT1	YDL223C	TGL3	P40308	642 aa		4.89	□□□□□ -1.63
HBT1	YDL223C	MRX12	P47084	519 aa		4.89	□□□□□ -1.63
HBT1	YDL223C	SSA4	P22202	642 aa	Known RBP	4.88	□□□□□ -1.63
HBT1	YDL223C	YDJ1	P25491	409 aa	Known RBP	4.88	□□□□□ -1.63
HBT1	YDL223C	SLI15	P38283	698 aa		4.88	□□□□□ -1.63
HBT1	YDL223C	HST2	P53686	357 aa		4.88	□□□□□ -1.63
HBT1	YDL223C	PKH3	Q03306	898 aa	Predicted RBP	4.88	□□□□□ -1.63
HBT1	YDL223C	PUP1	P25043	261 aa		4.88	□□□□□ -1.63
HBT1	YDL223C	TIF4632	P39936	914 aa	Known RBP	4.88	□□□□□ -1.63
HBT1	YDL223C	YOL036W	Q08206	761 aa		4.88	□□□□□ -1.63
HBT1	YDL223C	SUP45	P12385	437 aa	Known RBP	4.87	□□□□□ -1.63
HBT1	YDL223C	SET4	P42948	560 aa		4.87	□□□□□ -1.63
HBT1	YDL223C	YPR109W	Q06104	294 aa		4.87	□□□□□ -1.63
HBT1	YDL223C	CDC73	Q06697	393 aa		4.87	□□□□□ -1.63
HBT1	YDL223C	MST1	P07236	462 aa		4.87	□□□□□ -1.63
HBT1	YDL223C	MPH3	P0CE00	602 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms