RNA–Protein interactions for RNA: YCR073C

SSK22, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK22, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK22YCR073C MDS3P53094 1487 aa8.36□□□□□ -1.07
SSK22YCR073C GCN2P15442 1659 aa8.32□□□□□ -1.08
SSK22YCR073C RPO21P04050 1733 aaKnown RBP8.31□□□□□ -1.08
SSK22YCR073C SNT2P53127 1403 aa8.3□□□□□ -1.08
SSK22YCR073C GEA1P47102 1408 aaPredicted RBP8.28□□□□□ -1.08
SSK22YCR073C DNF1P32660 1571 aa8.28□□□□□ -1.08
SSK22YCR073C NTE1Q04958 1679 aa8.27□□□□□ -1.09
SSK22YCR073C TSC11P40061 1430 aa8.26□□□□□ -1.09
SSK22YCR073C RPA190P10964 1664 aaKnown RBP8.25□□□□□ -1.09
SSK22YCR073C SPO14P36126 1683 aa8.25□□□□□ -1.09
SSK22YCR073C YLR419WQ06698 1435 aaKnown RBP8.24□□□□□ -1.09
SSK22YCR073C VTH1P40438 1549 aa8.24□□□□□ -1.09
SSK22YCR073C VTH2P40890 1549 aa8.24□□□□□ -1.09
SSK22YCR073C PDR12Q02785 1511 aa8.23□□□□□ -1.09
SSK22YCR073C VPS15P22219 1454 aa8.21□□□□□ -1.1
SSK22YCR073C ARO1P08566 1588 aaKnown RBP8.19□□□□□ -1.1
SSK22YCR073C NUP159P40477 1460 aa8.17□□□□□ -1.1
SSK22YCR073C CDC25P04821 1589 aa8.17□□□□□ -1.1
SSK22YCR073C SRB8P25648 1427 aa8.16□□□□□ -1.1
SSK22YCR073C YRF1-1P0CX20 1796 aa8.13□□□□□ -1.11
SSK22YCR073C YRF1-5P0CX21 1796 aa8.13□□□□□ -1.11
SSK22YCR073C YRF1-8P0CX22 1796 aa8.13□□□□□ -1.11
SSK22YCR073C DOP1Q03921 1698 aa8.13□□□□□ -1.11
SSK22YCR073C GDB1Q06625 1536 aa8.12□□□□□ -1.11
SSK22YCR073C YOR093CQ12275 1648 aa8.12□□□□□ -1.11
SSK22YCR073C PAN1P32521 1480 aa8.07□□□□□ -1.12
SSK22YCR073C TY3B-IQ7LHG5 1498 aaKnown RBP8.07□□□□□ -1.12
SSK22YCR073C ENP1P38333 483 aaKnown RBP8.07□□□□□ -1.12
SSK22YCR073C PRS1P32895 427 aaKnown RBP8.07□□□□□ -1.12
SSK22YCR073C NUP192P47054 1683 aa8.07□□□□□ -1.12
SSK22YCR073C CHC1P22137 1653 aaKnown RBP8.06□□□□□ -1.12
SSK22YCR073C GEA2P39993 1459 aaKnown RBP8.05□□□□□ -1.12
SSK22YCR073C SPT7P35177 1332 aa8.04□□□□□ -1.12
SSK22YCR073C SAS10Q12136 610 aaPredicted RBP8.02□□□□□ -1.13
SSK22YCR073C BFR2Q06631 534 aaKnown RBP8.01□□□□□ -1.13
SSK22YCR073C CAT8P39113 1433 aa7.98□□□□□ -1.13
SSK22YCR073C VMR1P38735 1592 aa7.98□□□□□ -1.13
SSK22YCR073C DNF2Q12675 1612 aa7.97□□□□□ -1.13
SSK22YCR073C IQG1Q12280 1495 aa7.97□□□□□ -1.13
SSK22YCR073C BUD3P25558 1636 aa7.96□□□□□ -1.13
SSK22YCR073C CFT1Q06632 1357 aaKnown RBP7.91□□□□□ -1.14
SSK22YCR073C SEC3P33332 1336 aaKnown RBP7.9□□□□□ -1.15
SSK22YCR073C POL5P39985 1022 aaKnown RBP7.87□□□□□ -1.15
SSK22YCR073C SNF2P22082 1703 aa7.87□□□□□ -1.15
SSK22YCR073C TAF7Q05021 590 aa7.85□□□□□ -1.15
SSK22YCR073C YSP2Q06681 1438 aa7.85□□□□□ -1.15
SSK22YCR073C DNF3Q12674 1656 aa7.83□□□□□ -1.16
SSK22YCR073C MLP1Q02455 1875 aaKnown RBP7.83□□□□□ -1.16
SSK22YCR073C PDR11P40550 1411 aa7.83□□□□□ -1.16
SSK22YCR073C IML1P47170 1584 aa7.82□□□□□ -1.16
SSK22YCR073C RTT106P40161 455 aa7.82□□□□□ -1.16
SSK22YCR073C SEC7P11075 2009 aaKnown RBP7.8□□□□□ -1.16
SSK22YCR073C NUP188P52593 1655 aaKnown RBP7.8□□□□□ -1.16
SSK22YCR073C OPY1P38271 328 aa7.79□□□□□ -1.16
SSK22YCR073C LTE1P07866 1435 aa7.79□□□□□ -1.16
SSK22YCR073C YPR148CQ06523 435 aa7.78□□□□□ -1.16
SSK22YCR073C TY1B-NL2Q99337 1749 aaKnown RBP7.78□□□□□ -1.16
SSK22YCR073C MHP1P43638 1398 aa7.78□□□□□ -1.16
SSK22YCR073C IME2P32581 645 aa7.77□□□□□ -1.17
SSK22YCR073C NST1P53935 1240 aa7.77□□□□□ -1.17
SSK22YCR073C HAP1P0CE41 1502 aa7.74□□□□□ -1.17
SSK22YCR073C PSD2P53037 1138 aaKnown RBP7.74□□□□□ -1.17
SSK22YCR073C IFH1P39520 1085 aa7.73□□□□□ -1.17
SSK22YCR073C TFA1P36100 482 aa7.71□□□□□ -1.18
SSK22YCR073C DUR1,2P32528 1835 aaKnown RBP7.68□□□□□ -1.18
SSK22YCR073C NUP157P40064 1391 aaKnown RBP7.67□□□□□ -1.18
SSK22YCR073C USO1P25386 1790 aa7.67□□□□□ -1.18
SSK22YCR073C YIL177CP40434 1758 aa7.63□□□□□ -1.19
SSK22YCR073C YJL225CP40889 1758 aa7.63□□□□□ -1.19
SSK22YCR073C RAV1P47104 1357 aa7.63□□□□□ -1.19
SSK22YCR073C MMS1Q06211 1407 aa7.63□□□□□ -1.19
SSK22YCR073C EBP2P36049 427 aaKnown RBP7.62□□□□□ -1.19
SSK22YCR073C MET5P47169 1442 aa7.62□□□□□ -1.19
SSK22YCR073C YIR014WP40570 242 aa7.61□□□□□ -1.19
SSK22YCR073C RTC1Q08281 1341 aa7.56□□□□□ -1.2
SSK22YCR073C YML133CQ03099 1374 aa7.56□□□□□ -1.2
SSK22YCR073C YLL067CQ07888 1374 aa7.56□□□□□ -1.2
SSK22YCR073C YLL066CQ99208 1374 aa7.56□□□□□ -1.2
SSK22YCR073C IOC4Q04213 475 aa7.56□□□□□ -1.2
SSK22YCR073C APC1P53886 1748 aa7.56□□□□□ -1.2
SSK22YCR073C DRS2P39524 1355 aa7.53□□□□□ -1.2
SSK22YCR073C ABP1P15891 592 aaKnown RBP7.51□□□□□ -1.21
SSK22YCR073C BNI1P41832 1953 aa7.49□□□□□ -1.21
SSK22YCR073C YRF1-2P40105 1681 aa7.49□□□□□ -1.21
SSK22YCR073C BCK1Q01389 1478 aa7.48□□□□□ -1.21
SSK22YCR073C YEF3P16521 1044 aaKnown RBP7.48□□□□□ -1.21
SSK22YCR073C RVB2Q12464 471 aaKnown RBP7.46□□□□□ -1.22
SSK22YCR073C LEU3P08638 886 aa7.45□□□□□ -1.22
SSK22YCR073C FUN12P39730 1002 aaKnown RBP7.45□□□□□ -1.22
SSK22YCR073C RRP5Q05022 1729 aaKnown RBP7.45□□□□□ -1.22
SSK22YCR073C RPP0P05317 312 aaKnown RBP7.44□□□□□ -1.22
SSK22YCR073C CLC1P17891 233 aa7.44□□□□□ -1.22
SSK22YCR073C TY4B-HP0C2J7 1802 aa7.44□□□□□ -1.22
SSK22YCR073C PDS5Q04264 1277 aa7.43□□□□□ -1.22
SSK22YCR073C RPC31P17890 251 aa7.42□□□□□ -1.22
SSK22YCR073C SNF7P39929 240 aaKnown RBP7.42□□□□□ -1.22
SSK22YCR073C EDE1P34216 1381 aa7.42□□□□□ -1.22
SSK22YCR073C TRM3Q07527 1436 aa7.42□□□□□ -1.22
SSK22YCR073C TY4B-JP47024 1803 aa7.42□□□□□ -1.22
SSK22YCR073C CAB3P36076 571 aa7.41□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms