RNA–Protein interactions for RNA: YCR017C

CWH43, Transcript of Putative sensor/transporter protein involved in cell wall biogenesis, yeastyeast

Gene CWH43, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CWH43YCR017C YTA7P40340 1379 aa6.61□□□□□ -1.35
CWH43YCR017C GEA2P39993 1459 aaKnown RBP6.6□□□□□ -1.35
CWH43YCR017C PRI1P10363 409 aa6.59□□□□□ -1.36
CWH43YCR017C TSC11P40061 1430 aa6.57□□□□□ -1.36
CWH43YCR017C SNT2P53127 1403 aa6.57□□□□□ -1.36
CWH43YCR017C SNQ2P32568 1501 aaKnown RBP6.57□□□□□ -1.36
CWH43YCR017C YRF1-1P0CX20 1796 aa6.57□□□□□ -1.36
CWH43YCR017C YRF1-5P0CX21 1796 aa6.57□□□□□ -1.36
CWH43YCR017C YRF1-8P0CX22 1796 aa6.57□□□□□ -1.36
CWH43YCR017C NUP159P40477 1460 aa6.56□□□□□ -1.36
CWH43YCR017C AAD16Q02895 342 aa6.55□□□□□ -1.36
CWH43YCR017C VPS15P22219 1454 aa6.54□□□□□ -1.36
CWH43YCR017C BFR2Q06631 534 aaKnown RBP6.54□□□□□ -1.36
CWH43YCR017C PDR12Q02785 1511 aa6.53□□□□□ -1.36
CWH43YCR017C SPO14P36126 1683 aa6.53□□□□□ -1.36
CWH43YCR017C PRY3P47033 881 aa6.51□□□□□ -1.37
CWH43YCR017C BNI1P41832 1953 aa6.51□□□□□ -1.37
CWH43YCR017C STH1P32597 1359 aa6.5□□□□□ -1.37
CWH43YCR017C TRM3Q07527 1436 aa6.5□□□□□ -1.37
CWH43YCR017C BUD3P25558 1636 aa6.5□□□□□ -1.37
CWH43YCR017C IRC20Q06554 1556 aa6.49□□□□□ -1.37
CWH43YCR017C RPG1P38249 964 aaKnown RBP6.49□□□□□ -1.37
CWH43YCR017C DOP1Q03921 1698 aa6.48□□□□□ -1.37
CWH43YCR017C NUP170P38181 1502 aa6.48□□□□□ -1.37
CWH43YCR017C ULS1Q08562 1619 aa6.47□□□□□ -1.37
CWH43YCR017C GDB1Q06625 1536 aa6.46□□□□□ -1.38
CWH43YCR017C AVT3P36062 692 aa6.45□□□□□ -1.38
CWH43YCR017C DRS2P39524 1355 aa6.43□□□□□ -1.38
CWH43YCR017C DNF2Q12675 1612 aa6.42□□□□□ -1.38
CWH43YCR017C CHC1P22137 1653 aaKnown RBP6.41□□□□□ -1.38
CWH43YCR017C CAT8P39113 1433 aa6.38□□□□□ -1.39
CWH43YCR017C PDR15Q04182 1529 aaKnown RBP6.38□□□□□ -1.39
CWH43YCR017C IQG1Q12280 1495 aa6.38□□□□□ -1.39
CWH43YCR017C TAF7Q05021 590 aa6.37□□□□□ -1.39
CWH43YCR017C MMS1Q06211 1407 aa6.36□□□□□ -1.39
CWH43YCR017C RQC2Q12532 1038 aaKnown RBP6.36□□□□□ -1.39
CWH43YCR017C YBT1P32386 1661 aa6.34□□□□□ -1.39
CWH43YCR017C PDR10P51533 1564 aa6.32□□□□□ -1.4
CWH43YCR017C HAP1P0CE41 1502 aa6.32□□□□□ -1.4
CWH43YCR017C YOR093CQ12275 1648 aa6.31□□□□□ -1.4
CWH43YCR017C MET10P39692 1035 aa6.3□□□□□ -1.4
CWH43YCR017C MIF2P35201 549 aa6.28□□□□□ -1.4
CWH43YCR017C ARO1P08566 1588 aaKnown RBP6.26□□□□□ -1.41
CWH43YCR017C TY3B-GQ99315 1547 aa6.25□□□□□ -1.41
CWH43YCR017C NUP157P40064 1391 aaKnown RBP6.25□□□□□ -1.41
CWH43YCR017C TFA1P36100 482 aa6.24□□□□□ -1.41
CWH43YCR017C ITT1Q04638 464 aa6.24□□□□□ -1.41
CWH43YCR017C TSR3Q12094 313 aaKnown RBP6.24□□□□□ -1.41
CWH43YCR017C DNF3Q12674 1656 aa6.23□□□□□ -1.41
CWH43YCR017C GEA1P47102 1408 aaPredicted RBP6.23□□□□□ -1.41
CWH43YCR017C RTT106P40161 455 aa6.22□□□□□ -1.41
CWH43YCR017C SEC7P11075 2009 aaKnown RBP6.2□□□□□ -1.42
CWH43YCR017C RPL17AP05740 184 aaKnown RBP6.17□□□□□ -1.42
CWH43YCR017C RPL17BP46990 184 aaKnown RBP6.17□□□□□ -1.42
CWH43YCR017C REB1P21538 810 aa6.16□□□□□ -1.42
CWH43YCR017C HAA1Q12753 694 aaKnown RBP6.16□□□□□ -1.42
CWH43YCR017C TY1B-NL2Q99337 1749 aaKnown RBP6.14□□□□□ -1.43
CWH43YCR017C NUP188P52593 1655 aaKnown RBP6.14□□□□□ -1.43
CWH43YCR017C YCK3P39962 524 aa6.13□□□□□ -1.43
CWH43YCR017C SRB8P25648 1427 aa6.13□□□□□ -1.43
CWH43YCR017C YSP2Q06681 1438 aa6.13□□□□□ -1.43
CWH43YCR017C PDR5P33302 1511 aaKnown RBP6.13□□□□□ -1.43
CWH43YCR017C VMR1P38735 1592 aa6.12□□□□□ -1.43
CWH43YCR017C ABP1P15891 592 aaKnown RBP6.09□□□□□ -1.43
CWH43YCR017C GCN2P15442 1659 aa6.09□□□□□ -1.43
CWH43YCR017C URN1Q06525 465 aaKnown RBP6.08□□□□□ -1.44
CWH43YCR017C BNR1P40450 1375 aa6.08□□□□□ -1.44
CWH43YCR017C MRPL32P25348 183 aa6.05□□□□□ -1.44
CWH43YCR017C IML1P47170 1584 aa6.05□□□□□ -1.44
CWH43YCR017C SAS10Q12136 610 aaPredicted RBP6□□□□□ -1.45
CWH43YCR017C IKI3Q06706 1349 aaKnown RBP5.99□□□□□ -1.45
CWH43YCR017C IFH1P39520 1085 aa5.97□□□□□ -1.45
CWH43YCR017C YAP3P38749 330 aa5.97□□□□□ -1.45
CWH43YCR017C USO1P25386 1790 aa5.95□□□□□ -1.46
CWH43YCR017C YFR006WP43590 535 aa5.95□□□□□ -1.46
CWH43YCR017C NUP192P47054 1683 aa5.93□□□□□ -1.46
CWH43YCR017C CFT1Q06632 1357 aaKnown RBP5.92□□□□□ -1.46
CWH43YCR017C MAK10Q02197 733 aa5.9□□□□□ -1.46
CWH43YCR017C CKB1P43639 278 aa5.89□□□□□ -1.47
CWH43YCR017C YMR196WQ04336 1088 aa5.88□□□□□ -1.47
CWH43YCR017C BUD21Q08492 214 aaPredicted RBP5.88□□□□□ -1.47
CWH43YCR017C SPT21P35209 758 aa5.87□□□□□ -1.47
CWH43YCR017C IPL1P38991 367 aa5.85□□□□□ -1.47
CWH43YCR017C BCK1Q01389 1478 aa5.84□□□□□ -1.47
CWH43YCR017C RAV1P47104 1357 aa5.83□□□□□ -1.48
CWH43YCR017C YRF1-2P40105 1681 aa5.81□□□□□ -1.48
CWH43YCR017C SSM4P40318 1319 aa5.79□□□□□ -1.48
CWH43YCR017C RTC1Q08281 1341 aa5.76□□□□□ -1.49
CWH43YCR017C EDE1P34216 1381 aa5.75□□□□□ -1.49
CWH43YCR017C PDR11P40550 1411 aa5.75□□□□□ -1.49
CWH43YCR017C YKR023WP36119 530 aaKnown RBP5.74□□□□□ -1.49
CWH43YCR017C SCT1P32784 759 aa5.74□□□□□ -1.49
CWH43YCR017C PAF1P38351 445 aa5.74□□□□□ -1.49
CWH43YCR017C YGL015CP33199 130 aa5.73□□□□□ -1.49
CWH43YCR017C RIM101P33400 625 aa5.73□□□□□ -1.49
CWH43YCR017C RRP5Q05022 1729 aaKnown RBP5.72□□□□□ -1.49
CWH43YCR017C CDC27P38042 758 aa5.71□□□□□ -1.5
CWH43YCR017C TY3B-IQ7LHG5 1498 aaKnown RBP5.7□□□□□ -1.5
CWH43YCR017C TYS1P36421 394 aaKnown RBP5.69□□□□□ -1.5
CWH43YCR017C YAH1Q12184 172 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms