RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C DNA2P38859 1522 aa7.58□□□□□ -1.2
RGD1YBR260C KOG1P38873 1557 aa7.58□□□□□ -1.2
RGD1YBR260C MYO4P32492 1471 aa7.58□□□□□ -1.2
RGD1YBR260C NOP53Q12080 455 aaKnown RBP7.57□□□□□ -1.2
RGD1YBR260C GEA1P47102 1408 aaPredicted RBP7.57□□□□□ -1.2
RGD1YBR260C NUG1P40010 520 aaKnown RBP7.57□□□□□ -1.2
RGD1YBR260C RLF2Q12495 606 aa7.57□□□□□ -1.2
RGD1YBR260C MHP1P43638 1398 aa7.56□□□□□ -1.2
RGD1YBR260C NST1P53935 1240 aa7.56□□□□□ -1.2
RGD1YBR260C YIR014WP40570 242 aa7.55□□□□□ -1.2
RGD1YBR260C YPP1P46951 817 aa7.55□□□□□ -1.2
RGD1YBR260C YPK9Q12697 1472 aa7.55□□□□□ -1.2
RGD1YBR260C SWR1Q05471 1514 aa7.55□□□□□ -1.2
RGD1YBR260C YOR1P53049 1477 aa7.54□□□□□ -1.2
RGD1YBR260C RNA1P11745 407 aaKnown RBP7.54□□□□□ -1.2
RGD1YBR260C RKR1Q04781 1562 aa7.54□□□□□ -1.2
RGD1YBR260C RAD26P40352 1085 aa7.53□□□□□ -1.2
RGD1YBR260C FPR4Q06205 392 aaPredicted RBP7.53□□□□□ -1.2
RGD1YBR260C PCT1P13259 424 aa7.52□□□□□ -1.2
RGD1YBR260C IRC20Q06554 1556 aa7.52□□□□□ -1.21
RGD1YBR260C PDR15Q04182 1529 aaKnown RBP7.52□□□□□ -1.21
RGD1YBR260C NOP58Q12499 511 aaKnown RBP7.52□□□□□ -1.21
RGD1YBR260C DIP2Q12220 943 aaPredicted RBP7.51□□□□□ -1.21
RGD1YBR260C KRI1P42846 591 aaKnown RBP7.51□□□□□ -1.21
RGD1YBR260C YRB30P53107 440 aaPredicted RBP7.5□□□□□ -1.21
RGD1YBR260C NUP159P40477 1460 aa7.49□□□□□ -1.21
RGD1YBR260C KIP3P53086 805 aaKnown RBP7.49□□□□□ -1.21
RGD1YBR260C RVB2Q12464 471 aaKnown RBP7.49□□□□□ -1.21
RGD1YBR260C ABP1P15891 592 aaKnown RBP7.49□□□□□ -1.21
RGD1YBR260C KNS1P32350 737 aaPredicted RBP7.48□□□□□ -1.21
RGD1YBR260C SWE1P32944 819 aa7.48□□□□□ -1.21
RGD1YBR260C GCN2P15442 1659 aa7.48□□□□□ -1.21
RGD1YBR260C DEF1P35732 738 aaKnown RBP7.47□□□□□ -1.21
RGD1YBR260C NOT3P06102 836 aaKnown RBP7.47□□□□□ -1.21
RGD1YBR260C MSP1P28737 362 aa7.47□□□□□ -1.21
RGD1YBR260C VPS15P22219 1454 aa7.46□□□□□ -1.21
RGD1YBR260C TY3B-GQ99315 1547 aa7.46□□□□□ -1.22
RGD1YBR260C DNF1P32660 1571 aa7.46□□□□□ -1.22
RGD1YBR260C EDE1P34216 1381 aa7.46□□□□□ -1.22
RGD1YBR260C ARL1P38116 183 aaKnown RBP7.45□□□□□ -1.22
RGD1YBR260C VPS24P36095 224 aaKnown RBP7.44□□□□□ -1.22
RGD1YBR260C PDS5Q04264 1277 aa7.44□□□□□ -1.22
RGD1YBR260C CDC45Q08032 650 aa7.43□□□□□ -1.22
RGD1YBR260C SPC110P32380 944 aa7.42□□□□□ -1.22
RGD1YBR260C ULS1Q08562 1619 aa7.42□□□□□ -1.22
RGD1YBR260C CLB5P30283 435 aa7.41□□□□□ -1.22
RGD1YBR260C VPS27P40343 622 aaKnown RBP7.41□□□□□ -1.22
RGD1YBR260C SMC3P47037 1230 aa7.41□□□□□ -1.22
RGD1YBR260C ESC1Q03661 1658 aaKnown RBP7.41□□□□□ -1.22
RGD1YBR260C NOP7P53261 605 aaKnown RBP7.39□□□□□ -1.23
RGD1YBR260C RIX1P38883 763 aaPredicted RBP7.38□□□□□ -1.23
RGD1YBR260C PDR5P33302 1511 aaKnown RBP7.38□□□□□ -1.23
RGD1YBR260C GEA2P39993 1459 aaKnown RBP7.37□□□□□ -1.23
RGD1YBR260C TRM3Q07527 1436 aa7.37□□□□□ -1.23
RGD1YBR260C TEA1P47988 759 aa7.37□□□□□ -1.23
RGD1YBR260C SPT2P06843 333 aaPredicted RBP7.36□□□□□ -1.23
RGD1YBR260C NUP157P40064 1391 aaKnown RBP7.36□□□□□ -1.23
RGD1YBR260C PSH1Q12161 406 aa7.35□□□□□ -1.23
RGD1YBR260C NMD2P38798 1089 aaKnown RBP7.34□□□□□ -1.23
RGD1YBR260C RPP0P05317 312 aaKnown RBP7.34□□□□□ -1.24
RGD1YBR260C RAD2P07276 1031 aa7.34□□□□□ -1.24
RGD1YBR260C SUI2P20459 304 aaKnown RBP7.34□□□□□ -1.24
RGD1YBR260C SIC1P38634 284 aa7.34□□□□□ -1.24
RGD1YBR260C MSH3P25336 1018 aa7.33□□□□□ -1.24
RGD1YBR260C TPM2P40414 161 aa7.33□□□□□ -1.24
RGD1YBR260C DSN1P40568 576 aa7.33□□□□□ -1.24
RGD1YBR260C MED8P38304 223 aa7.32□□□□□ -1.24
RGD1YBR260C RSC1P53236 928 aa7.32□□□□□ -1.24
RGD1YBR260C YDL144CQ07589 356 aa7.32□□□□□ -1.24
RGD1YBR260C ATG2P53855 1592 aa7.32□□□□□ -1.24
RGD1YBR260C BMS1Q08965 1183 aaKnown RBP7.32□□□□□ -1.24
RGD1YBR260C ECM1P39715 212 aa7.31□□□□□ -1.24
RGD1YBR260C RPN1P38764 993 aaKnown RBP7.3□□□□□ -1.24
RGD1YBR260C DOS2P54858 310 aa7.3□□□□□ -1.24
RGD1YBR260C LSP1Q12230 341 aaKnown RBP7.3□□□□□ -1.24
RGD1YBR260C TY1B-DR3Q99231 1755 aa7.3□□□□□ -1.24
RGD1YBR260C YBT1P32386 1661 aa7.3□□□□□ -1.24
RGD1YBR260C MCM2P29469 868 aa7.3□□□□□ -1.24
RGD1YBR260C GDB1Q06625 1536 aa7.3□□□□□ -1.24
RGD1YBR260C SPB4P25808 606 aaPredicted RBP7.29□□□□□ -1.24
RGD1YBR260C MDG1P53885 366 aa7.29□□□□□ -1.24
RGD1YBR260C LCD1Q04377 747 aa7.29□□□□□ -1.24
RGD1YBR260C RPO31P04051 1460 aa7.29□□□□□ -1.24
RGD1YBR260C PRY3P47033 881 aa7.28□□□□□ -1.24
RGD1YBR260C YNL011CP53980 444 aa7.27□□□□□ -1.25
RGD1YBR260C PRP3Q03338 469 aaPredicted RBP7.27□□□□□ -1.25
RGD1YBR260C UTP13Q05946 817 aaKnown RBP7.27□□□□□ -1.25
RGD1YBR260C CLB1P24868 471 aa7.27□□□□□ -1.25
RGD1YBR260C MSH4P40965 878 aaPredicted RBP7.27□□□□□ -1.25
RGD1YBR260C DEP1P31385 405 aa7.26□□□□□ -1.25
RGD1YBR260C LTV1P34078 463 aa7.26□□□□□ -1.25
RGD1YBR260C CIN4P39110 191 aa7.26□□□□□ -1.25
RGD1YBR260C VPS4P52917 437 aa7.26□□□□□ -1.25
RGD1YBR260C ITC1P53125 1264 aa7.26□□□□□ -1.25
RGD1YBR260C HOS3Q02959 697 aaKnown RBP7.26□□□□□ -1.25
RGD1YBR260C TY3B-IQ7LHG5 1498 aaKnown RBP7.25□□□□□ -1.25
RGD1YBR260C VPS60Q03390 229 aa7.25□□□□□ -1.25
RGD1YBR260C ESC2Q06340 456 aa7.25□□□□□ -1.25
RGD1YBR260C ETT1Q08421 412 aaKnown RBP7.25□□□□□ -1.25
RGD1YBR260C NOP14Q99207 810 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms