RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C SPT16P32558 1035 aaKnown RBP8.94□□□□□ -0.98
CCR4YAL021C YSH1Q06224 779 aaPredicted RBP8.94□□□□□ -0.98
CCR4YAL021C STH1P32597 1359 aa8.93□□□□□ -0.98
CCR4YAL021C OPY1P38271 328 aa8.92□□□□□ -0.98
CCR4YAL021C MCM1P11746 286 aa8.9□□□□□ -0.98
CCR4YAL021C RAD26P40352 1085 aa8.9□□□□□ -0.98
CCR4YAL021C MSH4P40965 878 aaPredicted RBP8.88□□□□□ -0.99
CCR4YAL021C CTR9P89105 1077 aa8.88□□□□□ -0.99
CCR4YAL021C RPN7Q06103 429 aaKnown RBP8.88□□□□□ -0.99
CCR4YAL021C TY1B-AO13527 1196 aaKnown RBP8.87□□□□□ -0.99
CCR4YAL021C PRS1P32895 427 aaKnown RBP8.87□□□□□ -0.99
CCR4YAL021C ISW1P38144 1129 aa8.86□□□□□ -0.99
CCR4YAL021C RRP14P36080 434 aaKnown RBP8.84□□□□□ -0.99
CCR4YAL021C PAF1P38351 445 aa8.84□□□□□ -0.99
CCR4YAL021C MPP10P47083 593 aaKnown RBP8.84□□□□□ -0.99
CCR4YAL021C YKR023WP36119 530 aaKnown RBP8.84□□□□□ -0.99
CCR4YAL021C SEC9P40357 651 aa8.84□□□□□ -0.99
CCR4YAL021C ATG36P46983 293 aa8.84□□□□□ -0.99
CCR4YAL021C TPO2P53283 614 aa8.84□□□□□ -0.99
CCR4YAL021C YGL015CP33199 130 aa8.83□□□□□ -1
CCR4YAL021C SAP190P36123 1033 aa8.83□□□□□ -1
CCR4YAL021C PEA2P40091 420 aa8.83□□□□□ -1
CCR4YAL021C EAF7P53911 425 aaKnown RBP8.83□□□□□ -1
CCR4YAL021C BYE1P36106 594 aa8.83□□□□□ -1
CCR4YAL021C LEM3P42838 414 aa8.82□□□□□ -1
CCR4YAL021C NST1P53935 1240 aa8.82□□□□□ -1
CCR4YAL021C RIM101P33400 625 aa8.82□□□□□ -1
CCR4YAL021C PRP3Q03338 469 aaPredicted RBP8.82□□□□□ -1
CCR4YAL021C SUP35P05453 685 aaKnown RBP8.81□□□□□ -1
CCR4YAL021C LTV1P34078 463 aa8.81□□□□□ -1
CCR4YAL021C DAL5P15365 543 aa8.81□□□□□ -1
CCR4YAL021C BRN1P38170 754 aa8.81□□□□□ -1
CCR4YAL021C BRL1P38770 471 aa8.81□□□□□ -1
CCR4YAL021C RSC8P43609 557 aaKnown RBP8.8□□□□□ -1
CCR4YAL021C CFT1Q06632 1357 aaKnown RBP8.8□□□□□ -1
CCR4YAL021C CDC27P38042 758 aa8.8□□□□□ -1
CCR4YAL021C APL5Q08951 932 aaKnown RBP8.79□□□□□ -1
CCR4YAL021C SNF7P39929 240 aaKnown RBP8.79□□□□□ -1
CCR4YAL021C NOP8Q08287 484 aaPredicted RBP8.79□□□□□ -1
CCR4YAL021C SMC3P47037 1230 aa8.78□□□□□ -1
CCR4YAL021C TAN1P53072 289 aaPredicted RBP8.78□□□□□ -1
CCR4YAL021C TAF13P11747 167 aa8.77□□□□□ -1.01
CCR4YAL021C ABP1P15891 592 aaKnown RBP8.77□□□□□ -1.01
CCR4YAL021C HOP09932 586 aa8.75□□□□□ -1.01
CCR4YAL021C BMS1Q08965 1183 aaKnown RBP8.75□□□□□ -1.01
CCR4YAL021C YLL054CQ12244 843 aa8.74□□□□□ -1.01
CCR4YAL021C CBF5P33322 483 aaKnown RBP RIP-Chip data8.73□□□□□ -1.01not detected
CCR4YAL021C DSN1P40568 576 aa8.73□□□□□ -1.01
CCR4YAL021C PAP2P53632 584 aaKnown RBP8.73□□□□□ -1.01
CCR4YAL021C CLB5P30283 435 aa8.73□□□□□ -1.01
CCR4YAL021C DEP1P31385 405 aa8.73□□□□□ -1.01
CCR4YAL021C NOP58Q12499 511 aaKnown RBP8.73□□□□□ -1.01
CCR4YAL021C VPS72Q03388 795 aa8.72□□□□□ -1.01
CCR4YAL021C YMR196WQ04336 1088 aa8.72□□□□□ -1.01
CCR4YAL021C CDC11P32458 415 aa8.71□□□□□ -1.02
CCR4YAL021C AIM20P40451 204 aa8.71□□□□□ -1.02
CCR4YAL021C SSN2P38931 1420 aa8.71□□□□□ -1.02
CCR4YAL021C ALD3P54114 506 aa8.71□□□□□ -1.02
CCR4YAL021C TFC8Q12308 588 aa8.71□□□□□ -1.02
CCR4YAL021C MED8P38304 223 aa8.7□□□□□ -1.02
CCR4YAL021C PET111P08468 800 aa8.69□□□□□ -1.02
CCR4YAL021C CFT2Q12102 859 aaPredicted RBP8.69□□□□□ -1.02
CCR4YAL021C MTR4P47047 1073 aaKnown RBP8.69□□□□□ -1.02
CCR4YAL021C RPC31P17890 251 aa8.68□□□□□ -1.02
CCR4YAL021C RAD51P25454 400 aa8.68□□□□□ -1.02
CCR4YAL021C RPC82P32349 654 aa8.68□□□□□ -1.02
CCR4YAL021C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
CCR4YAL021C LAM6Q08001 693 aa8.68□□□□□ -1.02
CCR4YAL021C HOS4P40480 1083 aa8.66□□□□□ -1.02
CCR4YAL021C VID30P53076 958 aa8.66□□□□□ -1.02
CCR4YAL021C RRP15Q06511 250 aaPredicted RBP8.66□□□□□ -1.02
CCR4YAL021C DCD1P06773 312 aa8.66□□□□□ -1.02
CCR4YAL021C ROX1P25042 368 aa8.66□□□□□ -1.02
CCR4YAL021C PIM1P36775 1133 aa8.66□□□□□ -1.02
CCR4YAL021C ECM1P39715 212 aa8.65□□□□□ -1.02
CCR4YAL021C YPP1P46951 817 aa8.65□□□□□ -1.02
CCR4YAL021C NFI1Q12216 726 aa8.65□□□□□ -1.02
CCR4YAL021C SLN1P39928 1220 aaPredicted RBP8.64□□□□□ -1.03
CCR4YAL021C ERV41Q04651 352 aa8.64□□□□□ -1.03
CCR4YAL021C PSR1Q07800 427 aa8.64□□□□□ -1.03
CCR4YAL021C DSF2P38213 736 aa8.63□□□□□ -1.03
CCR4YAL021C VPS5Q92331 675 aa8.63□□□□□ -1.03
CCR4YAL021C RCF1Q03713 159 aa8.63□□□□□ -1.03
CCR4YAL021C ECM5Q03214 1411 aa8.63□□□□□ -1.03
CCR4YAL021C SRP54P20424 541 aaKnown RBP8.62□□□□□ -1.03
CCR4YAL021C SEC20P28791 383 aa8.62□□□□□ -1.03
CCR4YAL021C DJP1P40564 432 aa8.62□□□□□ -1.03
CCR4YAL021C YIL055CP40523 627 aaKnown RBP8.61□□□□□ -1.03
CCR4YAL021C KIP3P53086 805 aaKnown RBP8.61□□□□□ -1.03
CCR4YAL021C HSC82P15108 705 aaKnown RBP8.61□□□□□ -1.03
CCR4YAL021C ASF1P32447 279 aa8.61□□□□□ -1.03
CCR4YAL021C TPS3P38426 1054 aaKnown RBP8.6□□□□□ -1.03
CCR4YAL021C POL5P39985 1022 aaKnown RBP8.6□□□□□ -1.03
CCR4YAL021C PHO87P25360 923 aa8.6□□□□□ -1.03
CCR4YAL021C BUD21Q08492 214 aaPredicted RBP8.6□□□□□ -1.03
CCR4YAL021C TOP2P06786 1428 aaKnown RBP8.6□□□□□ -1.03
CCR4YAL021C BDP1P46678 594 aa8.59□□□□□ -1.03
CCR4YAL021C CEF1Q03654 590 aaPredicted RBP8.59□□□□□ -1.03
CCR4YAL021C GGA1Q06336 557 aa8.59□□□□□ -1.03
CCR4YAL021C CLF1Q12309 687 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms