RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeastyeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC3YAL011W RLF2Q12495 606 aa6.46□□□□□ -1.38
SWC3YAL011W PDR15Q04182 1529 aaKnown RBP6.46□□□□□ -1.38
SWC3YAL011W ABP1P15891 592 aaKnown RBP6.45□□□□□ -1.38
SWC3YAL011W CDC25P04821 1589 aa6.45□□□□□ -1.38
SWC3YAL011W IOC4Q04213 475 aa6.45□□□□□ -1.38
SWC3YAL011W ULS1Q08562 1619 aa6.44□□□□□ -1.38
SWC3YAL011W TY1B-JR2P47100 1755 aaKnown RBP6.43□□□□□ -1.38
SWC3YAL011W TY1B-ER2Q03619 1755 aa6.43□□□□□ -1.38
SWC3YAL011W TY1B-MR1Q04214 1755 aa6.43□□□□□ -1.38
SWC3YAL011W TY1B-MR2Q04670 1755 aaKnown RBP6.43□□□□□ -1.38
SWC3YAL011W TY1B-LR1Q12088 1755 aaKnown RBP6.43□□□□□ -1.38
SWC3YAL011W TY1B-NL1Q12112 1755 aa6.43□□□□□ -1.38
SWC3YAL011W TY1B-GR1Q12141 1755 aa6.43□□□□□ -1.38
SWC3YAL011W TY1B-BLQ12490 1755 aa6.43□□□□□ -1.38
SWC3YAL011W IKI3Q06706 1349 aaKnown RBP6.43□□□□□ -1.38
SWC3YAL011W VTH1P40438 1549 aa6.42□□□□□ -1.38
SWC3YAL011W VTH2P40890 1549 aa6.42□□□□□ -1.38
SWC3YAL011W ESC1Q03661 1658 aaKnown RBP6.42□□□□□ -1.38
SWC3YAL011W PAN1P32521 1480 aa6.41□□□□□ -1.38
SWC3YAL011W TSC11P40061 1430 aa6.41□□□□□ -1.38
SWC3YAL011W ORC1P54784 914 aaPredicted RBP6.41□□□□□ -1.38
SWC3YAL011W GEA1P47102 1408 aaPredicted RBP6.41□□□□□ -1.38
SWC3YAL011W RPN1P38764 993 aaKnown RBP6.41□□□□□ -1.38
SWC3YAL011W ISW2Q08773 1120 aa6.4□□□□□ -1.39
SWC3YAL011W URN1Q06525 465 aaKnown RBP6.39□□□□□ -1.39
SWC3YAL011W RPG1P38249 964 aaKnown RBP6.37□□□□□ -1.39
SWC3YAL011W NUP170P38181 1502 aa6.37□□□□□ -1.39
SWC3YAL011W RPA190P10964 1664 aaKnown RBP6.36□□□□□ -1.39
SWC3YAL011W SSM4P40318 1319 aa6.36□□□□□ -1.39
SWC3YAL011W SNT2P53127 1403 aa6.36□□□□□ -1.39
SWC3YAL011W TY3B-GQ99315 1547 aa6.34□□□□□ -1.39
SWC3YAL011W DNF1P32660 1571 aa6.34□□□□□ -1.39
SWC3YAL011W NTE1Q04958 1679 aa6.34□□□□□ -1.39
SWC3YAL011W RPO21P04050 1733 aaKnown RBP6.33□□□□□ -1.4
SWC3YAL011W YBT1P32386 1661 aa6.33□□□□□ -1.4
SWC3YAL011W RTT106P40161 455 aa6.32□□□□□ -1.4
SWC3YAL011W YCK3P39962 524 aa6.3□□□□□ -1.4
SWC3YAL011W SSP1P38871 571 aa6.29□□□□□ -1.4
SWC3YAL011W GEA2P39993 1459 aaKnown RBP6.29□□□□□ -1.4
SWC3YAL011W IRC20Q06554 1556 aa6.29□□□□□ -1.4
SWC3YAL011W VPS15P22219 1454 aa6.28□□□□□ -1.4
SWC3YAL011W CKB1P43639 278 aa6.27□□□□□ -1.41
SWC3YAL011W NUP159P40477 1460 aa6.26□□□□□ -1.41
SWC3YAL011W YRF1-1P0CX20 1796 aa6.25□□□□□ -1.41
SWC3YAL011W YRF1-5P0CX21 1796 aa6.25□□□□□ -1.41
SWC3YAL011W YRF1-8P0CX22 1796 aa6.25□□□□□ -1.41
SWC3YAL011W CAT8P39113 1433 aa6.25□□□□□ -1.41
SWC3YAL011W SPO14P36126 1683 aa6.23□□□□□ -1.41
SWC3YAL011W GDB1Q06625 1536 aa6.23□□□□□ -1.41
SWC3YAL011W PDR10P51533 1564 aa6.21□□□□□ -1.42
SWC3YAL011W TSR3Q12094 313 aaKnown RBP6.21□□□□□ -1.42
SWC3YAL011W ARO1P08566 1588 aaKnown RBP6.2□□□□□ -1.42
SWC3YAL011W MET10P39692 1035 aa6.2□□□□□ -1.42
SWC3YAL011W BUD3P25558 1636 aa6.19□□□□□ -1.42
SWC3YAL011W TOP1P04786 769 aa6.19□□□□□ -1.42
SWC3YAL011W YRB30P53107 440 aaPredicted RBP6.19□□□□□ -1.42
SWC3YAL011W SRB8P25648 1427 aa6.19□□□□□ -1.42
SWC3YAL011W PDR12Q02785 1511 aa6.19□□□□□ -1.42
SWC3YAL011W NOP8Q08287 484 aaPredicted RBP6.18□□□□□ -1.42
SWC3YAL011W NUP157P40064 1391 aaKnown RBP6.18□□□□□ -1.42
SWC3YAL011W HAA1Q12753 694 aaKnown RBP6.17□□□□□ -1.42
SWC3YAL011W MET5P47169 1442 aa6.16□□□□□ -1.42
SWC3YAL011W YML020WQ03722 664 aa6.15□□□□□ -1.42
SWC3YAL011W GCN2P15442 1659 aa6.15□□□□□ -1.43
SWC3YAL011W SEC7P11075 2009 aaKnown RBP6.14□□□□□ -1.43
SWC3YAL011W RIM101P33400 625 aa6.13□□□□□ -1.43
SWC3YAL011W BUD21Q08492 214 aaPredicted RBP6.13□□□□□ -1.43
SWC3YAL011W YSP2Q06681 1438 aa6.12□□□□□ -1.43
SWC3YAL011W POL5P39985 1022 aaKnown RBP6.11□□□□□ -1.43
SWC3YAL011W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.09□□□□□ -1.44not detected
SWC3YAL011W MMS1Q06211 1407 aa6.08□□□□□ -1.44
SWC3YAL011W IQG1Q12280 1495 aa6.08□□□□□ -1.44
SWC3YAL011W SNU71P53207 620 aaKnown RBP6.08□□□□□ -1.44
SWC3YAL011W RPL17AP05740 184 aaKnown RBP6.07□□□□□ -1.44
SWC3YAL011W NSR1P27476 414 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
SWC3YAL011W RPL17BP46990 184 aaKnown RBP6.07□□□□□ -1.44
SWC3YAL011W NOP7P53261 605 aaKnown RBP6.06□□□□□ -1.44
SWC3YAL011W BNR1P40450 1375 aa6.05□□□□□ -1.44
SWC3YAL011W HGH1P48362 394 aaKnown RBP6.05□□□□□ -1.44
SWC3YAL011W YOR093CQ12275 1648 aa6.04□□□□□ -1.44
SWC3YAL011W CHC1P22137 1653 aaKnown RBP6.03□□□□□ -1.44
SWC3YAL011W PAF1P38351 445 aa6.02□□□□□ -1.44
SWC3YAL011W SLX8P40072 274 aa6.02□□□□□ -1.44
SWC3YAL011W SPB4P25808 606 aaPredicted RBP6.02□□□□□ -1.45
SWC3YAL011W SPT21P35209 758 aa6.02□□□□□ -1.45
SWC3YAL011W DOP1Q03921 1698 aa6.01□□□□□ -1.45
SWC3YAL011W LTE1P07866 1435 aa6□□□□□ -1.45
SWC3YAL011W PDR5P33302 1511 aaKnown RBP5.99□□□□□ -1.45
SWC3YAL011W SSA1P10591 642 aaKnown RBP5.99□□□□□ -1.45
SWC3YAL011W GEF1P37020 779 aa5.99□□□□□ -1.45
SWC3YAL011W SPT7P35177 1332 aa5.99□□□□□ -1.45
SWC3YAL011W KIN1P13185 1064 aa5.98□□□□□ -1.45
SWC3YAL011W MGA2P40578 1113 aa5.98□□□□□ -1.45
SWC3YAL011W YPR148CQ06523 435 aa5.98□□□□□ -1.45
SWC3YAL011W BRL1P38770 471 aa5.98□□□□□ -1.45
SWC3YAL011W VMR1P38735 1592 aa5.97□□□□□ -1.45
SWC3YAL011W YLR271WQ06152 274 aa5.97□□□□□ -1.45
SWC3YAL011W ENP1P38333 483 aaKnown RBP5.96□□□□□ -1.45
SWC3YAL011W NUP188P52593 1655 aaKnown RBP5.96□□□□□ -1.45
SWC3YAL011W PDR11P40550 1411 aa5.96□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms