RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 TOPBP1Q92547 1522 aa17.48■□□□□ 0.39
CASC19-247ENST00000641642 CUX1P39880 1505 aa17.47■□□□□ 0.39
CASC19-247ENST00000641642 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
CASC19-247ENST00000641642 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
CASC19-247ENST00000641642 BIVM-ERCC5R4GMW8 1640 aa17.47■□□□□ 0.39
CASC19-247ENST00000641642 SYNJ1O43426 1573 aa17.42■□□□□ 0.38
CASC19-247ENST00000641642 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
CASC19-247ENST00000641642 CUX2O14529 1486 aa17.38■□□□□ 0.37
CASC19-247ENST00000641642 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
CASC19-247ENST00000641642 POLA1P09884 1462 aaPredicted RBP17.36■□□□□ 0.37
CASC19-247ENST00000641642 FBLN2P98095 1184 aa17.33■□□□□ 0.36
CASC19-247ENST00000641642 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
CASC19-247ENST00000641642 SOGA1O94964 1423 aa17.31■□□□□ 0.36
CASC19-247ENST00000641642 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
CASC19-247ENST00000641642 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
CASC19-247ENST00000641642 SPDYE2Q495Y8 402 aa17.3■□□□□ 0.36
CASC19-247ENST00000641642 PITPNM1O00562 1244 aa17.29■□□□□ 0.36
CASC19-247ENST00000641642 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
CASC19-247ENST00000641642 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
CASC19-247ENST00000641642 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
CASC19-247ENST00000641642 PIP4P2Q8N4L2 257 aa17.26■□□□□ 0.35
CASC19-247ENST00000641642 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
CASC19-247ENST00000641642 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
CASC19-247ENST00000641642 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
CASC19-247ENST00000641642 EEA1Q15075 1411 aa17.19■□□□□ 0.34
CASC19-247ENST00000641642 KIF27Q86VH2 1401 aa17.19■□□□□ 0.34
CASC19-247ENST00000641642 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
CASC19-247ENST00000641642 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
CASC19-247ENST00000641642 ABCA5Q8WWZ7 1642 aa17.12■□□□□ 0.33
CASC19-247ENST00000641642 TDRD9Q8NDG6 1382 aaKnown RBP17.12■□□□□ 0.33
CASC19-247ENST00000641642 SSUH2Q9Y2M2 353 aa17.11■□□□□ 0.33
CASC19-247ENST00000641642 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
CASC19-247ENST00000641642 ERICH3Q5RHP9 1530 aa17.09■□□□□ 0.33
CASC19-247ENST00000641642 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
CASC19-247ENST00000641642 AQRO60306 1485 aaKnown RBP eCLIP17.08■□□□□ 0.323e-6■■■■□ 24.7
CASC19-247ENST00000641642 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
CASC19-247ENST00000641642 IGF1RP08069 1367 aa17.04■□□□□ 0.32
CASC19-247ENST00000641642 RUSC2Q8N2Y8 1516 aa17.03■□□□□ 0.32
CASC19-247ENST00000641642 SP7Q8TDD2 431 aaPredicted RBP17.03■□□□□ 0.32
CASC19-247ENST00000641642 PBRM1Q86U86 1689 aa17.02■□□□□ 0.32
CASC19-247ENST00000641642 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
CASC19-247ENST00000641642 MAGI1Q96QZ7 1491 aaPredicted RBP17.01■□□□□ 0.31
CASC19-247ENST00000641642 CUL7Q14999 1698 aa17■□□□□ 0.31
CASC19-247ENST00000641642 SPDYE1Q8NFV5 336 aaPredicted RBP16.98■□□□□ 0.31
CASC19-247ENST00000641642 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.31
CASC19-247ENST00000641642 CARMIL1Q5VZK9 1371 aa16.96■□□□□ 0.31
CASC19-247ENST00000641642 SNAPC4Q5SXM2 1469 aa16.94■□□□□ 0.3
CASC19-247ENST00000641642 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
CASC19-247ENST00000641642 FAM9AQ8IZU1 332 aaPredicted RBP16.93■□□□□ 0.3
CASC19-247ENST00000641642 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
CASC19-247ENST00000641642 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
CASC19-247ENST00000641642 RAPGEF2Q9Y4G8 1499 aa16.91■□□□□ 0.3
CASC19-247ENST00000641642 KIF21BO75037 1637 aa16.9■□□□□ 0.3
CASC19-247ENST00000641642 CHMP7Q8WUX9 453 aaPredicted RBP16.88■□□□□ 0.29
CASC19-247ENST00000641642 HAX1O00165 279 aa16.87■□□□□ 0.29
CASC19-247ENST00000641642 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
CASC19-247ENST00000641642 GRIN2AQ12879 1464 aa16.84■□□□□ 0.29
CASC19-247ENST00000641642 GOLGA3Q08378 1498 aa16.83■□□□□ 0.28
CASC19-247ENST00000641642 PRKAR2AP13861 404 aaKnown RBP16.8■□□□□ 0.28
CASC19-247ENST00000641642 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
CASC19-247ENST00000641642 CHD1O14646 1710 aa16.78■□□□□ 0.28
CASC19-247ENST00000641642 NUP160Q12769 1436 aa16.78■□□□□ 0.28
CASC19-247ENST00000641642 EVX2Q03828 476 aa16.74■□□□□ 0.27
CASC19-247ENST00000641642 UBTFP17480 764 aaKnown RBP16.73■□□□□ 0.27
CASC19-247ENST00000641642 KIAA0586Q9BVV6 1533 aa16.73■□□□□ 0.27
CASC19-247ENST00000641642 TNIKQ9UKE5 1360 aa16.72■□□□□ 0.27
CASC19-247ENST00000641642 CTTNBP2Q8WZ74 1663 aa16.69■□□□□ 0.26
CASC19-247ENST00000641642 CEP170Q5SW79 1584 aa16.69■□□□□ 0.26
CASC19-247ENST00000641642 LOC105371045A0A1W2PR82 267 aa16.66■□□□□ 0.26
CASC19-247ENST00000641642 IQGAP2Q13576 1575 aa16.65■□□□□ 0.26
CASC19-247ENST00000641642 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
CASC19-247ENST00000641642 C19orf67A6NJJ6 358 aa16.63■□□□□ 0.25
CASC19-247ENST00000641642 PRR29P0C7W0 189 aa16.62■□□□□ 0.25
CASC19-247ENST00000641642 JPH4Q96JJ6 628 aa16.61■□□□□ 0.25
CASC19-247ENST00000641642 UGGT2Q9NYU1 1516 aa16.6■□□□□ 0.25
CASC19-247ENST00000641642 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
CASC19-247ENST00000641642 CHADLQ6NUI6 762 aa16.58■□□□□ 0.24
CASC19-247ENST00000641642 EFCAB5A4FU69 1503 aa16.56■□□□□ 0.24
CASC19-247ENST00000641642 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
CASC19-247ENST00000641642 CEP162Q5TB80 1403 aa16.53■□□□□ 0.24
CASC19-247ENST00000641642 CLIP1P30622 1438 aa16.52■□□□□ 0.23
CASC19-247ENST00000641642 SAMD9Q5K651 1589 aa16.51■□□□□ 0.23
CASC19-247ENST00000641642 PRG4Q92954 1404 aaPredicted RBP16.5■□□□□ 0.23
CASC19-247ENST00000641642 DISP1Q96F81 1524 aa16.49■□□□□ 0.23
CASC19-247ENST00000641642 KIAA0556O60303 1618 aa16.48■□□□□ 0.23
CASC19-247ENST00000641642 ARHGAP35Q9NRY4 1499 aa16.48■□□□□ 0.23
CASC19-247ENST00000641642 RANGAP1P46060 587 aaPredicted RBP16.42■□□□□ 0.22
CASC19-247ENST00000641642 FMN1Q68DA7 1419 aa16.42■□□□□ 0.22
CASC19-247ENST00000641642 ARHGEF11O15085 1522 aa16.4■□□□□ 0.22
CASC19-247ENST00000641642 PTPRGP23470 1445 aa16.39■□□□□ 0.21
CASC19-247ENST00000641642 ARAP1Q96P48 1450 aa16.38■□□□□ 0.21
CASC19-247ENST00000641642 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
CASC19-247ENST00000641642 FARP1Q9Y4F1 1045 aaPredicted RBP16.38■□□□□ 0.21
CASC19-247ENST00000641642 FHOD3Q2V2M9 1422 aa16.37■□□□□ 0.21
CASC19-247ENST00000641642 ERCC6L2Q5T890 1561 aa16.36■□□□□ 0.21
CASC19-247ENST00000641642 P3H3Q8IVL6 736 aa16.36■□□□□ 0.21
CASC19-247ENST00000641642 GABBR2O75899 941 aa16.35■□□□□ 0.21
CASC19-247ENST00000641642 DNAJC5Q9H3Z4 198 aa16.35■□□□□ 0.21
CASC19-247ENST00000641642 VPS8Q8N3P4 1428 aa16.34■□□□□ 0.21
CASC19-247ENST00000641642 RIMBP3CA6NJZ7 1639 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms