RNA–Protein interactions for RNA: ENST00000638682.1

LINC02001-202, Transcript of long intergenic non-protein coding RNA 2001, humanhuman

TSL 5 BASIC

Gene LINC02001, Length 1,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02001-202ENST00000638682 POTEHQ6S545 545 aa18.51■□□□□ 0.55
LINC02001-202ENST00000638682 BIVM-ERCC5R4GMW8 1640 aa18.5■□□□□ 0.55
LINC02001-202ENST00000638682 TOP2BQ02880 1626 aa18.49■□□□□ 0.55
LINC02001-202ENST00000638682 DNAJC5Q9H3Z4 198 aa18.49■□□□□ 0.55
LINC02001-202ENST00000638682 WDR97A6NE52 1622 aa18.47■□□□□ 0.55
LINC02001-202ENST00000638682 AQRO60306 1485 aaKnown RBP eCLIP18.46■□□□□ 0.55
LINC02001-202ENST00000638682 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
LINC02001-202ENST00000638682 ABCA10Q8WWZ4 1543 aa18.4■□□□□ 0.54
LINC02001-202ENST00000638682 ABCA5Q8WWZ7 1642 aa18.36■□□□□ 0.53
LINC02001-202ENST00000638682 GRIN2BQ13224 1484 aa18.35■□□□□ 0.53
LINC02001-202ENST00000638682 FAM9AQ8IZU1 332 aaPredicted RBP18.34■□□□□ 0.53
LINC02001-202ENST00000638682 GAPVD1Q14C86 1478 aa18.34■□□□□ 0.53
LINC02001-202ENST00000638682 SNAPC4Q5SXM2 1469 aa18.34■□□□□ 0.53
LINC02001-202ENST00000638682 PBRM1Q86U86 1689 aa18.34■□□□□ 0.53
LINC02001-202ENST00000638682 CHD1O14646 1710 aa18.32■□□□□ 0.52
LINC02001-202ENST00000638682 MAGI1Q96QZ7 1491 aaPredicted RBP18.31■□□□□ 0.52
LINC02001-202ENST00000638682 OSCARQ8IYS5 282 aa18.29■□□□□ 0.52
LINC02001-202ENST00000638682 MYCNP04198 464 aaPredicted RBP18.28■□□□□ 0.52
LINC02001-202ENST00000638682 EEA1Q15075 1411 aa18.25■□□□□ 0.51
LINC02001-202ENST00000638682 FBLN2P98095 1184 aa18.25■□□□□ 0.51
LINC02001-202ENST00000638682 LOC105371045A0A1W2PR82 267 aa18.24■□□□□ 0.51
LINC02001-202ENST00000638682 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
LINC02001-202ENST00000638682 SYNJ2O15056 1496 aa18.23■□□□□ 0.51
LINC02001-202ENST00000638682 ADAMTS12P58397 1594 aa18.21■□□□□ 0.51
LINC02001-202ENST00000638682 ERICH3Q5RHP9 1530 aa18.2■□□□□ 0.5
LINC02001-202ENST00000638682 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
LINC02001-202ENST00000638682 RBM42Q9BTD8 480 aaKnown RBP18.17■□□□□ 0.5
LINC02001-202ENST00000638682 KIF27Q86VH2 1401 aa18.14■□□□□ 0.49
LINC02001-202ENST00000638682 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
LINC02001-202ENST00000638682 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
LINC02001-202ENST00000638682 GRIN2AQ12879 1464 aa18.13■□□□□ 0.49
LINC02001-202ENST00000638682 CLASP1Q7Z460 1538 aa18.1■□□□□ 0.49
LINC02001-202ENST00000638682 POLA2Q14181 598 aa18.09■□□□□ 0.49
LINC02001-202ENST00000638682 EHMT2Q96KQ7 1210 aa18.08■□□□□ 0.49
LINC02001-202ENST00000638682 ARHGEF11O15085 1522 aa18.08■□□□□ 0.49
LINC02001-202ENST00000638682 RIMBP3CA6NJZ7 1639 aa18.08■□□□□ 0.48
LINC02001-202ENST00000638682 RIMBP3BA6NNM3 1639 aa18.08■□□□□ 0.48
LINC02001-202ENST00000638682 RIMBP3Q9UFD9 1639 aa18.08■□□□□ 0.48
LINC02001-202ENST00000638682 KIF21BO75037 1637 aa18.07■□□□□ 0.48
LINC02001-202ENST00000638682 CUL7Q14999 1698 aa18.05■□□□□ 0.48
LINC02001-202ENST00000638682 SLC4A1APQ9BWU0 796 aaKnown RBP18.03■□□□□ 0.48
LINC02001-202ENST00000638682 CEP170Q5SW79 1584 aa18.03■□□□□ 0.48
LINC02001-202ENST00000638682 NUP160Q12769 1436 aa18.02■□□□□ 0.48
LINC02001-202ENST00000638682 GOLGA3Q08378 1498 aa18.02■□□□□ 0.47
LINC02001-202ENST00000638682 IGF1RP08069 1367 aa18■□□□□ 0.47
LINC02001-202ENST00000638682 FOXD4L1Q9NU39 408 aa17.96■□□□□ 0.47
LINC02001-202ENST00000638682 PRXQ9BXM0 1461 aa17.94■□□□□ 0.46
LINC02001-202ENST00000638682 CARMIL1Q5VZK9 1371 aa17.93■□□□□ 0.46
LINC02001-202ENST00000638682 ARAP1Q96P48 1450 aa17.92■□□□□ 0.46
LINC02001-202ENST00000638682 RAPGEF2Q9Y4G8 1499 aa17.92■□□□□ 0.46
LINC02001-202ENST00000638682 TNIKQ9UKE5 1360 aa17.92■□□□□ 0.46
LINC02001-202ENST00000638682 UBTFP17480 764 aaKnown RBP17.9■□□□□ 0.46
LINC02001-202ENST00000638682 SHROOM2Q13796 1616 aa17.9■□□□□ 0.46
LINC02001-202ENST00000638682 CYB5RLQ6IPT4 315 aa17.84■□□□□ 0.45
LINC02001-202ENST00000638682 KIAA0586Q9BVV6 1533 aa17.84■□□□□ 0.45
LINC02001-202ENST00000638682 ERCC6L2Q5T890 1561 aa17.83■□□□□ 0.45
LINC02001-202ENST00000638682 CEP162Q5TB80 1403 aa17.83■□□□□ 0.45
LINC02001-202ENST00000638682 PRG4Q92954 1404 aaPredicted RBP17.8■□□□□ 0.44
LINC02001-202ENST00000638682 CHRDL2Q6WN34 429 aa17.8■□□□□ 0.44
LINC02001-202ENST00000638682 ZBTB12Q9Y330 459 aaPredicted RBP17.79■□□□□ 0.44
LINC02001-202ENST00000638682 IQGAP2Q13576 1575 aa17.79■□□□□ 0.44
LINC02001-202ENST00000638682 ATF5Q9Y2D1 282 aaPredicted RBP17.78■□□□□ 0.44
LINC02001-202ENST00000638682 JPH4Q96JJ6 628 aa17.77■□□□□ 0.43
LINC02001-202ENST00000638682 CTTNBP2Q8WZ74 1663 aa17.72■□□□□ 0.43
LINC02001-202ENST00000638682 CLIP1P30622 1438 aa17.71■□□□□ 0.43
LINC02001-202ENST00000638682 CARMIL2Q6F5E8 1435 aa17.67■□□□□ 0.42
LINC02001-202ENST00000638682 AKT1S1Q96B36 256 aa17.67■□□□□ 0.42
LINC02001-202ENST00000638682 UGGT2Q9NYU1 1516 aa17.65■□□□□ 0.42
LINC02001-202ENST00000638682 RANGAP1P46060 587 aaPredicted RBP17.62■□□□□ 0.41
LINC02001-202ENST00000638682 DISP1Q96F81 1524 aa17.61■□□□□ 0.41
LINC02001-202ENST00000638682 KIAA0556O60303 1618 aa17.61■□□□□ 0.41
LINC02001-202ENST00000638682 PTPRGP23470 1445 aa17.57■□□□□ 0.4
LINC02001-202ENST00000638682 TTBK1Q5TCY1 1321 aaPredicted RBP17.56■□□□□ 0.4
LINC02001-202ENST00000638682 ADCY10Q96PN6 1610 aa17.56■□□□□ 0.4
LINC02001-202ENST00000638682 ARHGAP35Q9NRY4 1499 aa17.55■□□□□ 0.4
LINC02001-202ENST00000638682 VPS8Q8N3P4 1428 aa17.54■□□□□ 0.4
LINC02001-202ENST00000638682 ZBTB22O15209 634 aa17.51■□□□□ 0.39
LINC02001-202ENST00000638682 EFCAB5A4FU69 1503 aa17.5■□□□□ 0.39
LINC02001-202ENST00000638682 ABCC2Q92887 1545 aa17.48■□□□□ 0.39
LINC02001-202ENST00000638682 SAMD9Q5K651 1589 aa17.47■□□□□ 0.39
LINC02001-202ENST00000638682 UACAQ9BZF9 1416 aa17.47■□□□□ 0.39
LINC02001-202ENST00000638682 ATXN8OSP0DMR3 200 aa17.47■□□□□ 0.39
LINC02001-202ENST00000638682 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
LINC02001-202ENST00000638682 NPM1P06748 294 aaKnown RBP eCLIP17.46■□□□□ 0.39
LINC02001-202ENST00000638682 MAPKBP1O60336 1514 aa17.45■□□□□ 0.38
LINC02001-202ENST00000638682 UHRF1BP1LA0JNW5 1464 aa17.45■□□□□ 0.38
LINC02001-202ENST00000638682 PPARGC1BQ86YN6 1023 aaKnown RBP17.42■□□□□ 0.38
LINC02001-202ENST00000638682 PLB1Q6P1J6 1458 aa17.41■□□□□ 0.38
LINC02001-202ENST00000638682 P3H3Q8IVL6 736 aa17.4■□□□□ 0.38
LINC02001-202ENST00000638682 ABCA8O94911 1581 aa17.39■□□□□ 0.38
LINC02001-202ENST00000638682 FHOD3Q2V2M9 1422 aa17.38■□□□□ 0.37
LINC02001-202ENST00000638682 TRIM26Q12899 539 aaPredicted RBP17.37■□□□□ 0.37
LINC02001-202ENST00000638682 ZCCHC11Q5TAX3 1644 aaKnown RBP17.37■□□□□ 0.37
LINC02001-202ENST00000638682 KDM5BQ9UGL1 1544 aa17.37■□□□□ 0.37
LINC02001-202ENST00000638682 DIP2BQ9P265 1576 aa17.36■□□□□ 0.37
LINC02001-202ENST00000638682 PCGF6Q9BYE7 350 aa17.35■□□□□ 0.37
LINC02001-202ENST00000638682 KIF13AQ9H1H9 1805 aa17.35■□□□□ 0.37
LINC02001-202ENST00000638682 PCF11O94913 1555 aaKnown RBP17.35■□□□□ 0.37
LINC02001-202ENST00000638682 ABCC10Q5T3U5 1492 aa17.34■□□□□ 0.37
LINC02001-202ENST00000638682 ASXL2Q76L83 1435 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms