RNA–Protein interactions for RNA: ENST00000638112.1

GABRA1-219, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GABRA1, Length 2,818 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-219ENST00000638112 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.32□□□□□ -0.28
GABRA1-219ENST00000638112 TARBP1Q13395 1621 aaKnown RBP13.31□□□□□ -0.28
GABRA1-219ENST00000638112 BIVM-ERCC5R4GMW8 1640 aa13.3□□□□□ -0.28
GABRA1-219ENST00000638112 ITGAEP38570 1179 aa13.3□□□□□ -0.28
GABRA1-219ENST00000638112 TDRD9Q8NDG6 1382 aaKnown RBP13.29□□□□□ -0.28
GABRA1-219ENST00000638112 AQRO60306 1485 aaKnown RBP eCLIP13.28□□□□□ -0.28
GABRA1-219ENST00000638112 FKBP8Q14318 412 aa13.27□□□□□ -0.29
GABRA1-219ENST00000638112 MYT1LQ9UL68 1186 aa13.26□□□□□ -0.29
GABRA1-219ENST00000638112 UBE2Q2Q8WVN8 375 aa13.24□□□□□ -0.29
GABRA1-219ENST00000638112 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
GABRA1-219ENST00000638112 EIF4G3O43432 1585 aaKnown RBP13.23□□□□□ -0.29
GABRA1-219ENST00000638112 ABCA10Q8WWZ4 1543 aa13.22□□□□□ -0.29
GABRA1-219ENST00000638112 WDR97A6NE52 1622 aa13.19□□□□□ -0.3
GABRA1-219ENST00000638112 GAPVD1Q14C86 1478 aa13.17□□□□□ -0.3
GABRA1-219ENST00000638112 NBR1Q14596 966 aa13.14□□□□□ -0.31
GABRA1-219ENST00000638112 ABCA5Q8WWZ7 1642 aa13.14□□□□□ -0.31
GABRA1-219ENST00000638112 IL27Q8NEV9 243 aa13.14□□□□□ -0.31
GABRA1-219ENST00000638112 GRIN2BQ13224 1484 aa13.13□□□□□ -0.31
GABRA1-219ENST00000638112 EIF5BO60841 1220 aaKnown RBP13.13□□□□□ -0.31
GABRA1-219ENST00000638112 KCNH8Q96L42 1107 aa13.13□□□□□ -0.31
GABRA1-219ENST00000638112 FBLN2P98095 1184 aa13.12□□□□□ -0.31
GABRA1-219ENST00000638112 SNAPC4Q5SXM2 1469 aa13.12□□□□□ -0.31
GABRA1-219ENST00000638112 RUSC2Q8N2Y8 1516 aa13.1□□□□□ -0.31
GABRA1-219ENST00000638112 PBRM1Q86U86 1689 aa13.09□□□□□ -0.31
GABRA1-219ENST00000638112 KIF27Q86VH2 1401 aa13.09□□□□□ -0.31
GABRA1-219ENST00000638112 ERICH6BQ5W0A0 696 aa13.09□□□□□ -0.31
GABRA1-219ENST00000638112 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
GABRA1-219ENST00000638112 FANCIQ9NVI1 1328 aa13.08□□□□□ -0.32
GABRA1-219ENST00000638112 CHMP7Q8WUX9 453 aaPredicted RBP13.07□□□□□ -0.32
GABRA1-219ENST00000638112 MAGI1Q96QZ7 1491 aaPredicted RBP13.06□□□□□ -0.32
GABRA1-219ENST00000638112 IGF1RP08069 1367 aa13.06□□□□□ -0.32
GABRA1-219ENST00000638112 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
GABRA1-219ENST00000638112 ERICH3Q5RHP9 1530 aa13.04□□□□□ -0.32
GABRA1-219ENST00000638112 NEFLP07196 543 aa13.03□□□□□ -0.32
GABRA1-219ENST00000638112 CHD1O14646 1710 aa13.03□□□□□ -0.32
GABRA1-219ENST00000638112 SYNJ2O15056 1496 aa13.03□□□□□ -0.32
GABRA1-219ENST00000638112 DNAJC5Q9H3Z4 198 aa13.03□□□□□ -0.32
GABRA1-219ENST00000638112 PKNOX2Q96KN3 472 aa13.03□□□□□ -0.32
GABRA1-219ENST00000638112 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
GABRA1-219ENST00000638112 ADAMTS12P58397 1594 aa13.01□□□□□ -0.33
GABRA1-219ENST00000638112 FHAD1B1AJZ9 1412 aa13□□□□□ -0.33
GABRA1-219ENST00000638112 CARMIL1Q5VZK9 1371 aa12.98□□□□□ -0.33
GABRA1-219ENST00000638112 GRIN2AQ12879 1464 aa12.97□□□□□ -0.33
GABRA1-219ENST00000638112 IRX6P78412 446 aaPredicted RBP12.93□□□□□ -0.34
GABRA1-219ENST00000638112 CDK11AQ9UQ88 783 aaPredicted RBP12.93□□□□□ -0.34
GABRA1-219ENST00000638112 CUL7Q14999 1698 aa12.93□□□□□ -0.34
GABRA1-219ENST00000638112 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
GABRA1-219ENST00000638112 CEP170Q5SW79 1584 aa12.91□□□□□ -0.34
GABRA1-219ENST00000638112 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
GABRA1-219ENST00000638112 NUP160Q12769 1436 aa12.91□□□□□ -0.34
GABRA1-219ENST00000638112 TRIM52Q96A61 297 aa12.9□□□□□ -0.34
GABRA1-219ENST00000638112 CLASP1Q7Z460 1538 aa12.89□□□□□ -0.35
GABRA1-219ENST00000638112 PRXQ9BXM0 1461 aa12.89□□□□□ -0.35
GABRA1-219ENST00000638112 RAPGEF2Q9Y4G8 1499 aa12.89□□□□□ -0.35
GABRA1-219ENST00000638112 EEA1Q15075 1411 aa12.89□□□□□ -0.35
GABRA1-219ENST00000638112 TIMELESSQ9UNS1 1208 aa12.86□□□□□ -0.35
GABRA1-219ENST00000638112 PODXL2Q9NZ53 605 aa12.86□□□□□ -0.35
GABRA1-219ENST00000638112 NOP58Q9Y2X3 529 aaKnown RBP12.85□□□□□ -0.35
GABRA1-219ENST00000638112 RTL5Q5HYW3 569 aaPredicted RBP12.84□□□□□ -0.35
GABRA1-219ENST00000638112 JPH4Q96JJ6 628 aa12.83□□□□□ -0.36
GABRA1-219ENST00000638112 ARHGEF11O15085 1522 aa12.82□□□□□ -0.36
GABRA1-219ENST00000638112 CEP162Q5TB80 1403 aa12.82□□□□□ -0.36
GABRA1-219ENST00000638112 KIAA0586Q9BVV6 1533 aa12.81□□□□□ -0.36
GABRA1-219ENST00000638112 RIMBP3CA6NJZ7 1639 aa12.8□□□□□ -0.36
GABRA1-219ENST00000638112 RIMBP3BA6NNM3 1639 aa12.8□□□□□ -0.36
GABRA1-219ENST00000638112 RIMBP3Q9UFD9 1639 aa12.8□□□□□ -0.36
GABRA1-219ENST00000638112 ERCC6L2Q5T890 1561 aa12.79□□□□□ -0.36
GABRA1-219ENST00000638112 PRG4Q92954 1404 aaPredicted RBP12.77□□□□□ -0.36
GABRA1-219ENST00000638112 TNIKQ9UKE5 1360 aa12.77□□□□□ -0.36
GABRA1-219ENST00000638112 CYB5RLQ6IPT4 315 aa12.77□□□□□ -0.37
GABRA1-219ENST00000638112 SHROOM2Q13796 1616 aa12.76□□□□□ -0.37
GABRA1-219ENST00000638112 KIF21BO75037 1637 aa12.76□□□□□ -0.37
GABRA1-219ENST00000638112 IQGAP2Q13576 1575 aa12.75□□□□□ -0.37
GABRA1-219ENST00000638112 UBTFP17480 764 aaKnown RBP12.75□□□□□ -0.37
GABRA1-219ENST00000638112 RANGAP1P46060 587 aaPredicted RBP12.75□□□□□ -0.37
GABRA1-219ENST00000638112 ARAP1Q96P48 1450 aa12.74□□□□□ -0.37
GABRA1-219ENST00000638112 BRPF3Q9ULD4 1205 aa12.73□□□□□ -0.37
GABRA1-219ENST00000638112 CTTNBP2Q8WZ74 1663 aa12.71□□□□□ -0.37
GABRA1-219ENST00000638112 GOLGA3Q08378 1498 aa12.71□□□□□ -0.37
GABRA1-219ENST00000638112 DDX10Q13206 875 aaKnown RBP12.71□□□□□ -0.37
GABRA1-219ENST00000638112 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
GABRA1-219ENST00000638112 ZMYND15Q9H091 742 aa12.69□□□□□ -0.38
GABRA1-219ENST00000638112 DISP1Q96F81 1524 aa12.69□□□□□ -0.38
GABRA1-219ENST00000638112 UGGT2Q9NYU1 1516 aa12.68□□□□□ -0.38
GABRA1-219ENST00000638112 P3H3Q8IVL6 736 aa12.68□□□□□ -0.38
GABRA1-219ENST00000638112 DHX57Q6P158 1386 aaKnown RBP12.67□□□□□ -0.38
GABRA1-219ENST00000638112 B4GALNT3Q6L9W6 998 aa12.66□□□□□ -0.38
GABRA1-219ENST00000638112 CARMIL2Q6F5E8 1435 aa12.66□□□□□ -0.38
GABRA1-219ENST00000638112 CCER2I3L3R5 266 aa12.65□□□□□ -0.38
GABRA1-219ENST00000638112 LAS1LQ9Y4W2 734 aaKnown RBP12.64□□□□□ -0.39
GABRA1-219ENST00000638112 DAXXQ9UER7 740 aaPredicted RBP12.64□□□□□ -0.39
GABRA1-219ENST00000638112 ZBTB47Q9UFB7 747 aaPredicted RBP12.64□□□□□ -0.39
GABRA1-219ENST00000638112 PTPRGP23470 1445 aa12.63□□□□□ -0.39
GABRA1-219ENST00000638112 KIAA0556O60303 1618 aa12.63□□□□□ -0.39
GABRA1-219ENST00000638112 NEFMP07197 916 aa12.61□□□□□ -0.39
GABRA1-219ENST00000638112 A0A0U1RQG5 324 aaPredicted RBP12.6□□□□□ -0.39
GABRA1-219ENST00000638112 C11orf95C9JLR9 678 aaPredicted RBP12.6□□□□□ -0.39
GABRA1-219ENST00000638112 HIRIP3Q9BW71 556 aaPredicted RBP12.6□□□□□ -0.39
GABRA1-219ENST00000638112 IPO9Q96P70 1041 aaKnown RBP12.59□□□□□ -0.39
GABRA1-219ENST00000638112 ANP32AP39687 249 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms