RNA–Protein interactions for RNA: ENST00000637550.1

CACNB4-258, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 3,038 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-258ENST00000637550 FANCD2Q9BXW9 1451 aa8.26□□□□□ -1.09
CACNB4-258ENST00000637550 GOLGA3Q08378 1498 aa8.25□□□□□ -1.09
CACNB4-258ENST00000637550 FGD5Q6ZNL6 1462 aa8.24□□□□□ -1.09
CACNB4-258ENST00000637550 BIVM-ERCC5R4GMW8 1640 aa8.24□□□□□ -1.09
CACNB4-258ENST00000637550 ANO8Q9HCE9 1232 aaPredicted RBP8.24□□□□□ -1.09
CACNB4-258ENST00000637550 CUX2O14529 1486 aa8.24□□□□□ -1.09
CACNB4-258ENST00000637550 SAMD1Q6SPF0 538 aaPredicted RBP8.24□□□□□ -1.09
CACNB4-258ENST00000637550 DCAF8L1A6NGE4 600 aa8.24□□□□□ -1.09
CACNB4-258ENST00000637550 NEUROD1Q13562 356 aa8.24□□□□□ -1.09
CACNB4-258ENST00000637550 P3H3Q8IVL6 736 aa8.24□□□□□ -1.09
CACNB4-258ENST00000637550 TNIKQ9UKE5 1360 aa8.23□□□□□ -1.09
CACNB4-258ENST00000637550 U3KPZ7 1027 aaPredicted RBP8.23□□□□□ -1.09
CACNB4-258ENST00000637550 POTEDQ86YR6 584 aa8.21□□□□□ -1.1
CACNB4-258ENST00000637550 CEP164Q9UPV0 1460 aa8.2□□□□□ -1.1
CACNB4-258ENST00000637550 CLIP1P30622 1438 aa8.2□□□□□ -1.1
CACNB4-258ENST00000637550 EEA1Q15075 1411 aa8.2□□□□□ -1.1
CACNB4-258ENST00000637550 PRDM2Q13029 1718 aa8.2□□□□□ -1.1
CACNB4-258ENST00000637550 TDRD9Q8NDG6 1382 aaKnown RBP8.2□□□□□ -1.1
CACNB4-258ENST00000637550 KIF21AQ7Z4S6 1674 aa8.19□□□□□ -1.1
CACNB4-258ENST00000637550 UBE2Q2Q8WVN8 375 aa8.19□□□□□ -1.1
CACNB4-258ENST00000637550 URB2Q14146 1524 aaKnown RBP8.19□□□□□ -1.1
CACNB4-258ENST00000637550 PODXL2Q9NZ53 605 aa8.19□□□□□ -1.1
CACNB4-258ENST00000637550 KIF27Q86VH2 1401 aa8.18□□□□□ -1.1
CACNB4-258ENST00000637550 TOPBP1Q92547 1522 aa8.17□□□□□ -1.1
CACNB4-258ENST00000637550 KIF21BO75037 1637 aa8.17□□□□□ -1.1
CACNB4-258ENST00000637550 IGF1RP08069 1367 aa8.17□□□□□ -1.1
CACNB4-258ENST00000637550 POLA1P09884 1462 aaPredicted RBP8.17□□□□□ -1.1
CACNB4-258ENST00000637550 ATP1B4Q9UN42 357 aaPredicted RBP8.16□□□□□ -1.1
CACNB4-258ENST00000637550 PRXQ9BXM0 1461 aa8.15□□□□□ -1.1
CACNB4-258ENST00000637550 KANK4Q5T7N3 995 aaPredicted RBP8.14□□□□□ -1.11
CACNB4-258ENST00000637550 CARMIL1Q5VZK9 1371 aa8.13□□□□□ -1.11
CACNB4-258ENST00000637550 DNMBPQ6XZF7 1577 aa8.12□□□□□ -1.11
CACNB4-258ENST00000637550 ARID3CA6NKF2 412 aa8.12□□□□□ -1.11
CACNB4-258ENST00000637550 RNF39Q9H2S5 420 aa8.12□□□□□ -1.11
CACNB4-258ENST00000637550 ARAP1Q96P48 1450 aa8.12□□□□□ -1.11
CACNB4-258ENST00000637550 AQRO60306 1485 aaKnown RBP eCLIP8.1□□□□□ -1.11
CACNB4-258ENST00000637550 LAMC3Q9Y6N6 1575 aa8.1□□□□□ -1.11
CACNB4-258ENST00000637550 ITGAEP38570 1179 aa8.1□□□□□ -1.11
CACNB4-258ENST00000637550 PDS5BQ9NTI5 1447 aa8.09□□□□□ -1.11
CACNB4-258ENST00000637550 VPS8Q8N3P4 1428 aa8.08□□□□□ -1.12
CACNB4-258ENST00000637550 PKNOX2Q96KN3 472 aa8.08□□□□□ -1.12
CACNB4-258ENST00000637550 ARHGAP35Q9NRY4 1499 aa8.07□□□□□ -1.12
CACNB4-258ENST00000637550 ZNF608Q9ULD9 1512 aaPredicted RBP8.07□□□□□ -1.12
CACNB4-258ENST00000637550 CCER1Q8TC90 406 aaPredicted RBP8.07□□□□□ -1.12
CACNB4-258ENST00000637550 C1QBPQ07021 282 aaKnown RBP8.06□□□□□ -1.12
CACNB4-258ENST00000637550 FHOD3Q2V2M9 1422 aa8.06□□□□□ -1.12
CACNB4-258ENST00000637550 ERICH3Q5RHP9 1530 aa8.06□□□□□ -1.12
CACNB4-258ENST00000637550 ERCC6Q03468 1493 aa8.06□□□□□ -1.12
CACNB4-258ENST00000637550 ABCA10Q8WWZ4 1543 aa8.05□□□□□ -1.12
CACNB4-258ENST00000637550 FBLN2P98095 1184 aa8.05□□□□□ -1.12
CACNB4-258ENST00000637550 CCDC136Q96JN2 1154 aa8.04□□□□□ -1.12
CACNB4-258ENST00000637550 GAPVD1Q14C86 1478 aa8.04□□□□□ -1.12
CACNB4-258ENST00000637550 ATF5Q9Y2D1 282 aaPredicted RBP8.03□□□□□ -1.12
CACNB4-258ENST00000637550 ZEB1P37275 1124 aaPredicted RBP8.02□□□□□ -1.13
CACNB4-258ENST00000637550 SALL2Q9Y467 1007 aaPredicted RBP8.02□□□□□ -1.13
CACNB4-258ENST00000637550 WDR97A6NE52 1622 aa8.01□□□□□ -1.13
CACNB4-258ENST00000637550 MRC2Q9UBG0 1479 aa8.01□□□□□ -1.13
CACNB4-258ENST00000637550 TARBP1Q13395 1621 aaKnown RBP8.01□□□□□ -1.13
CACNB4-258ENST00000637550 ABCA5Q8WWZ7 1642 aa7.99□□□□□ -1.13
CACNB4-258ENST00000637550 ZNF219Q9P2Y4 722 aaPredicted RBP7.97□□□□□ -1.13
CACNB4-258ENST00000637550 PCF11O94913 1555 aaKnown RBP7.96□□□□□ -1.14
CACNB4-258ENST00000637550 KLHL34Q8N239 644 aa7.96□□□□□ -1.14
CACNB4-258ENST00000637550 PBRM1Q86U86 1689 aa7.96□□□□□ -1.14
CACNB4-258ENST00000637550 FAM50AQ14320 339 aaKnown RBP7.95□□□□□ -1.14
CACNB4-258ENST00000637550 SNAPC4Q5SXM2 1469 aa7.94□□□□□ -1.14
CACNB4-258ENST00000637550 CTTNBP2Q8WZ74 1663 aa7.93□□□□□ -1.14
CACNB4-258ENST00000637550 CUL7Q14999 1698 aa7.93□□□□□ -1.14
CACNB4-258ENST00000637550 PHLDB1Q86UU1 1377 aa7.93□□□□□ -1.14
CACNB4-258ENST00000637550 THOC2Q8NI27 1593 aaKnown RBP7.92□□□□□ -1.14
CACNB4-258ENST00000637550 WDR62O43379 1518 aa7.92□□□□□ -1.14
CACNB4-258ENST00000637550 CHMP7Q8WUX9 453 aaPredicted RBP7.92□□□□□ -1.14
CACNB4-258ENST00000637550 EIF4G3O43432 1585 aaKnown RBP7.92□□□□□ -1.14
CACNB4-258ENST00000637550 LRRIQ1Q96JM4 1722 aa7.9□□□□□ -1.14
CACNB4-258ENST00000637550 ADAMTS12P58397 1594 aa7.9□□□□□ -1.14
CACNB4-258ENST00000637550 GRIN2BQ13224 1484 aa7.9□□□□□ -1.14
CACNB4-258ENST00000637550 TIAM1Q13009 1591 aa7.9□□□□□ -1.15
CACNB4-258ENST00000637550 IFT140Q96RY7 1462 aa7.89□□□□□ -1.15
CACNB4-258ENST00000637550 FHAD1B1AJZ9 1412 aa7.89□□□□□ -1.15
CACNB4-258ENST00000637550 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.88□□□□□ -1.15
CACNB4-258ENST00000637550 LRRC9Q6ZRR7 1453 aa7.88□□□□□ -1.15
CACNB4-258ENST00000637550 CCNB3Q8WWL7 1395 aa7.87□□□□□ -1.15
CACNB4-258ENST00000637550 CDK13Q14004 1512 aaKnown RBP7.87□□□□□ -1.15
CACNB4-258ENST00000637550 NEFLP07196 543 aa7.86□□□□□ -1.15
CACNB4-258ENST00000637550 PDE4CQ08493 712 aa7.86□□□□□ -1.15
CACNB4-258ENST00000637550 CHIC2Q9UKJ5 165 aa7.86□□□□□ -1.15
CACNB4-258ENST00000637550 PDIA4P13667 645 aaKnown RBP7.86□□□□□ -1.15
CACNB4-258ENST00000637550 TSHZ2Q9NRE2 1034 aa7.86□□□□□ -1.15
CACNB4-258ENST00000637550 MTUS2Q5JR59 1369 aa7.85□□□□□ -1.15
CACNB4-258ENST00000637550 MAGI3Q5TCQ9 1506 aa7.85□□□□□ -1.15
CACNB4-258ENST00000637550 IQGAP2Q13576 1575 aa7.85□□□□□ -1.15
CACNB4-258ENST00000637550 GRIN2AQ12879 1464 aa7.84□□□□□ -1.15
CACNB4-258ENST00000637550 SAMD9Q5K651 1589 aa7.84□□□□□ -1.15
CACNB4-258ENST00000637550 CEP170Q5SW79 1584 aa7.84□□□□□ -1.15
CACNB4-258ENST00000637550 CASKIN1Q8WXD9 1431 aa7.84□□□□□ -1.15
CACNB4-258ENST00000637550 ZBTB12Q9Y330 459 aaPredicted RBP7.84□□□□□ -1.16
CACNB4-258ENST00000637550 SPINK5Q9NQ38 1064 aaPredicted RBP7.83□□□□□ -1.16
CACNB4-258ENST00000637550 RRBP1Q9P2E9 1410 aaKnown RBP7.82□□□□□ -1.16
CACNB4-258ENST00000637550 CFAP43Q8NDM7 1665 aa7.82□□□□□ -1.16
CACNB4-258ENST00000637550 EFCAB5A4FU69 1503 aa7.82□□□□□ -1.16
CACNB4-258ENST00000637550 ZNF644Q9H582 1327 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms