RNA–Protein interactions for RNA: ENST00000637550.1

CACNB4-258, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 3,038 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-258ENST00000637550 AEBP2Q6ZN18 517 aaPredicted RBP13.06□□□□□ -0.32
CACNB4-258ENST00000637550 CHIC1Q5VXU3 224 aa13.05□□□□□ -0.32
CACNB4-258ENST00000637550 NISCHQ9Y2I1 1504 aa11.44□□□□□ -0.58
CACNB4-258ENST00000637550 PHF23Q9BUL5 403 aaPredicted RBP11.41□□□□□ -0.58
CACNB4-258ENST00000637550 SENP3Q9H4L4 574 aaPredicted RBP11.16□□□□□ -0.62
CACNB4-258ENST00000637550 PLPPR3Q6T4P5 718 aa10.65□□□□□ -0.7
CACNB4-258ENST00000637550 FOXD1Q16676 465 aa10.24□□□□□ -0.77
CACNB4-258ENST00000637550 PPP6R1Q9UPN7 881 aa9.91□□□□□ -0.82
CACNB4-258ENST00000637550 ADRA2BP18089 450 aa9.9□□□□□ -0.83
CACNB4-258ENST00000637550 SHROOM4Q9ULL8 1493 aa9.88□□□□□ -0.83
CACNB4-258ENST00000637550 DCAF8L2P0C7V8 631 aa9.87□□□□□ -0.83
CACNB4-258ENST00000637550 CCDC180Q9P1Z9 1646 aa9.73□□□□□ -0.85
CACNB4-258ENST00000637550 PELP1Q8IZL8 1130 aaKnown RBP9.7□□□□□ -0.86
CACNB4-258ENST00000637550 PIAS4Q8N2W9 510 aaPredicted RBP9.64□□□□□ -0.87
CACNB4-258ENST00000637550 ZCCHC6Q5VYS8 1495 aaKnown RBP9.6□□□□□ -0.87
CACNB4-258ENST00000637550 MYT1Q01538 1121 aa9.58□□□□□ -0.88
CACNB4-258ENST00000637550 SUPT5HO00267 1087 aaKnown RBP9.53□□□□□ -0.88
CACNB4-258ENST00000637550 ABCC9O60706 1549 aa9.52□□□□□ -0.89
CACNB4-258ENST00000637550 MSH5O43196 834 aa9.5□□□□□ -0.89
CACNB4-258ENST00000637550 PPP4R3CPQ6ZMV5 832 aa9.36□□□□□ -0.91
CACNB4-258ENST00000637550 SCRIBQ14160 1630 aa9.32□□□□□ -0.92
CACNB4-258ENST00000637550 KCNA4P22459 653 aa9.26□□□□□ -0.93
CACNB4-258ENST00000637550 NCBP3Q53F19 620 aaKnown RBP9.24□□□□□ -0.93
CACNB4-258ENST00000637550 SCAF1Q9H7N4 1312 aaKnown RBP9.22□□□□□ -0.93
CACNB4-258ENST00000637550 DCAF1Q9Y4B6 1507 aa9.22□□□□□ -0.93
CACNB4-258ENST00000637550 TTBK1Q5TCY1 1321 aaPredicted RBP9.22□□□□□ -0.93
CACNB4-258ENST00000637550 PRKCSHP14314 528 aaPredicted RBP9.19□□□□□ -0.94
CACNB4-258ENST00000637550 CNKSR2Q8WXI2 1034 aa9.13□□□□□ -0.95
CACNB4-258ENST00000637550 PABPN1Q86U42 306 aaKnown RBP eCLIP9.13□□□□□ -0.95
CACNB4-258ENST00000637550 DNAJC5BQ9UF47 199 aa9.1□□□□□ -0.95
CACNB4-258ENST00000637550 CECR2Q9BXF3 1484 aa9.08□□□□□ -0.96
CACNB4-258ENST00000637550 NACADO15069 1562 aa9.08□□□□□ -0.96
CACNB4-258ENST00000637550 SLC24A1O60721 1099 aa9.07□□□□□ -0.96
CACNB4-258ENST00000637550 NPM3O75607 178 aaKnown RBP9.03□□□□□ -0.96
CACNB4-258ENST00000637550 RB1CC1Q8TDY2 1594 aa9.03□□□□□ -0.96
CACNB4-258ENST00000637550 MYO15BQ96JP2 1530 aa9.01□□□□□ -0.97
CACNB4-258ENST00000637550 RSF1Q96T23 1441 aaPredicted RBP9.01□□□□□ -0.97
CACNB4-258ENST00000637550 UNC13AQ9UPW8 1703 aa9□□□□□ -0.97
CACNB4-258ENST00000637550 MROH2BQ7Z745 1585 aa8.97□□□□□ -0.97
CACNB4-258ENST00000637550 DMRT2Q9Y5R5 561 aa8.97□□□□□ -0.97
CACNB4-258ENST00000637550 ERICH6Q7L0X2 663 aa8.96□□□□□ -0.98
CACNB4-258ENST00000637550 EHMT2Q96KQ7 1210 aa8.95□□□□□ -0.98
CACNB4-258ENST00000637550 RNF216Q9NWF9 866 aaPredicted RBP8.94□□□□□ -0.98
CACNB4-258ENST00000637550 WIZO95785 1651 aa8.94□□□□□ -0.98
CACNB4-258ENST00000637550 APLP2Q06481 763 aa8.9□□□□□ -0.99
CACNB4-258ENST00000637550 MAPK8IP2Q13387 824 aaPredicted RBP8.89□□□□□ -0.99
CACNB4-258ENST00000637550 SLC4A1APQ9BWU0 796 aaKnown RBP8.89□□□□□ -0.99
CACNB4-258ENST00000637550 HOXD11P31277 338 aaPredicted RBP8.88□□□□□ -0.99
CACNB4-258ENST00000637550 LOC105371045A0A1W2PR82 267 aa8.88□□□□□ -0.99
CACNB4-258ENST00000637550 FAM9AQ8IZU1 332 aaPredicted RBP8.87□□□□□ -0.99
CACNB4-258ENST00000637550 BICRAQ9NZM4 1560 aa8.87□□□□□ -0.99
CACNB4-258ENST00000637550 BCL11AQ9H165 835 aa8.87□□□□□ -0.99
CACNB4-258ENST00000637550 SMARCA4P51532 1647 aa8.78□□□□□ -1
CACNB4-258ENST00000637550 BAZ1AQ9NRL2 1556 aaPredicted RBP8.77□□□□□ -1.01
CACNB4-258ENST00000637550 HRCP23327 699 aa8.76□□□□□ -1.01
CACNB4-258ENST00000637550 TRIM41Q8WV44 630 aa8.76□□□□□ -1.01
CACNB4-258ENST00000637550 CCDC88BA6NC98 1476 aa8.7□□□□□ -1.02
CACNB4-258ENST00000637550 ABCC8Q09428 1581 aa8.69□□□□□ -1.02
CACNB4-258ENST00000637550 TOP2AP11388 1531 aaKnown RBP8.66□□□□□ -1.02
CACNB4-258ENST00000637550 SMARCA2P51531 1590 aa8.66□□□□□ -1.02
CACNB4-258ENST00000637550 CSRNP3Q8WYN3 585 aa8.65□□□□□ -1.02
CACNB4-258ENST00000637550 ATAD2BQ9ULI0 1458 aa8.63□□□□□ -1.03
CACNB4-258ENST00000637550 PPARGC1BQ86YN6 1023 aaKnown RBP8.61□□□□□ -1.03
CACNB4-258ENST00000637550 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
CACNB4-258ENST00000637550 BAZ1BQ9UIG0 1483 aaKnown RBP8.59□□□□□ -1.03
CACNB4-258ENST00000637550 EIF4G1Q04637 1599 aaKnown RBP8.59□□□□□ -1.03
CACNB4-258ENST00000637550 FOXD4L1Q9NU39 408 aa8.59□□□□□ -1.04
CACNB4-258ENST00000637550 PCGF6Q9BYE7 350 aa8.56□□□□□ -1.04
CACNB4-258ENST00000637550 RUSC2Q8N2Y8 1516 aa8.56□□□□□ -1.04
CACNB4-258ENST00000637550 ZBTB22O15209 634 aa8.55□□□□□ -1.04
CACNB4-258ENST00000637550 SOGA1O94964 1423 aa8.54□□□□□ -1.04
CACNB4-258ENST00000637550 RANGAP1P46060 587 aaPredicted RBP8.54□□□□□ -1.04
CACNB4-258ENST00000637550 PEG3Q9GZU2 1588 aa8.51□□□□□ -1.05
CACNB4-258ENST00000637550 CENPBP07199 599 aaPredicted RBP8.5□□□□□ -1.05
CACNB4-258ENST00000637550 EIF5BO60841 1220 aaKnown RBP8.49□□□□□ -1.05
CACNB4-258ENST00000637550 SLC4A2P04920 1241 aa8.49□□□□□ -1.05
CACNB4-258ENST00000637550 CC2D2AQ9P2K1 1620 aa8.48□□□□□ -1.05
CACNB4-258ENST00000637550 SYNJ1O43426 1573 aa8.47□□□□□ -1.05
CACNB4-258ENST00000637550 WRNQ14191 1432 aaPredicted RBP eCLIP8.46□□□□□ -1.06
CACNB4-258ENST00000637550 NCAPD3P42695 1498 aa8.43□□□□□ -1.06
CACNB4-258ENST00000637550 UBTFP17480 764 aaKnown RBP8.43□□□□□ -1.06
CACNB4-258ENST00000637550 ATXN8OSP0DMR3 200 aa8.42□□□□□ -1.06
CACNB4-258ENST00000637550 NESP48681 1621 aa8.41□□□□□ -1.06
CACNB4-258ENST00000637550 MYCNP04198 464 aaPredicted RBP8.41□□□□□ -1.06
CACNB4-258ENST00000637550 HMGXB3Q12766 1538 aa8.38□□□□□ -1.07
CACNB4-258ENST00000637550 PLEKHG5O94827 1062 aa8.36□□□□□ -1.07
CACNB4-258ENST00000637550 CUX1P39880 1505 aa8.35□□□□□ -1.07
CACNB4-258ENST00000637550 CFTRP13569 1480 aa8.33□□□□□ -1.08
CACNB4-258ENST00000637550 RAPGEF2Q9Y4G8 1499 aa8.31□□□□□ -1.08
CACNB4-258ENST00000637550 CADPSQ9ULU8 1353 aa8.31□□□□□ -1.08
CACNB4-258ENST00000637550 CEP162Q5TB80 1403 aa8.31□□□□□ -1.08
CACNB4-258ENST00000637550 GTF3C3Q9Y5Q9 886 aa8.3□□□□□ -1.08
CACNB4-258ENST00000637550 ANP32EQ9BTT0 268 aa8.29□□□□□ -1.08
CACNB4-258ENST00000637550 ACIN1Q9UKV3 1341 aaKnown RBP8.29□□□□□ -1.08
CACNB4-258ENST00000637550 TOP2BQ02880 1626 aa8.29□□□□□ -1.08
CACNB4-258ENST00000637550 TRIM26Q12899 539 aaPredicted RBP8.29□□□□□ -1.08
CACNB4-258ENST00000637550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.29□□□□□ -1.08
CACNB4-258ENST00000637550 HNRNPUL2Q1KMD3 747 aaKnown RBP8.29□□□□□ -1.08
CACNB4-258ENST00000637550 RAD54L2Q9Y4B4 1467 aa8.27□□□□□ -1.09
CACNB4-258ENST00000637550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.27□□□□□ -1.096e-7■■■■■ 26.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms