RNA–Protein interactions for RNA: ENST00000635288.1

LINC01778-208, Transcript of long intergenic non-protein coding RNA 1778, humanhuman

TSL 5 BASIC

Gene LINC01778, Length 1,095 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01778-208ENST00000635288 ARAP1Q96P48 1450 aa12.98□□□□□ -0.33
LINC01778-208ENST00000635288 CYB5RLQ6IPT4 315 aa12.98□□□□□ -0.33
LINC01778-208ENST00000635288 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
LINC01778-208ENST00000635288 URB2Q14146 1524 aaKnown RBP12.95□□□□□ -0.34
LINC01778-208ENST00000635288 RSF1Q96T23 1441 aaPredicted RBP12.95□□□□□ -0.34
LINC01778-208ENST00000635288 MROH2BQ7Z745 1585 aa12.94□□□□□ -0.34
LINC01778-208ENST00000635288 CHD1O14646 1710 aa12.93□□□□□ -0.34
LINC01778-208ENST00000635288 PRDM2Q13029 1718 aa12.93□□□□□ -0.34
LINC01778-208ENST00000635288 FKBP8Q14318 412 aa12.92□□□□□ -0.34
LINC01778-208ENST00000635288 FXR2P51116 673 aaKnown RBP eCLIP12.91□□□□□ -0.34
LINC01778-208ENST00000635288 CFTRP13569 1480 aa12.91□□□□□ -0.34
LINC01778-208ENST00000635288 IFT140Q96RY7 1462 aa12.9□□□□□ -0.34
LINC01778-208ENST00000635288 EVX2Q03828 476 aa12.89□□□□□ -0.35
LINC01778-208ENST00000635288 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
LINC01778-208ENST00000635288 ZNF608Q9ULD9 1512 aaPredicted RBP12.85□□□□□ -0.35
LINC01778-208ENST00000635288 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
LINC01778-208ENST00000635288 ATF5Q9Y2D1 282 aaPredicted RBP12.85□□□□□ -0.35
LINC01778-208ENST00000635288 PITPNM1O00562 1244 aa12.83□□□□□ -0.36
LINC01778-208ENST00000635288 LHX8Q68G74 356 aa12.82□□□□□ -0.36
LINC01778-208ENST00000635288 AMER1Q5JTC6 1135 aaPredicted RBP12.81□□□□□ -0.36
LINC01778-208ENST00000635288 PCGF6Q9BYE7 350 aa12.81□□□□□ -0.36
LINC01778-208ENST00000635288 WIZO95785 1651 aa12.8□□□□□ -0.36
LINC01778-208ENST00000635288 TRIM26Q12899 539 aaPredicted RBP12.79□□□□□ -0.36
LINC01778-208ENST00000635288 PLSCR2Q9NRY7 297 aa12.79□□□□□ -0.36
LINC01778-208ENST00000635288 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
LINC01778-208ENST00000635288 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
LINC01778-208ENST00000635288 CLASP1Q7Z460 1538 aa12.73□□□□□ -0.37
LINC01778-208ENST00000635288 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
LINC01778-208ENST00000635288 ABCC8Q09428 1581 aa12.73□□□□□ -0.37
LINC01778-208ENST00000635288 TOPBP1Q92547 1522 aa12.71□□□□□ -0.38
LINC01778-208ENST00000635288 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
LINC01778-208ENST00000635288 SYNJ1O43426 1573 aa12.69□□□□□ -0.38
LINC01778-208ENST00000635288 DNMBPQ6XZF7 1577 aa12.66□□□□□ -0.38
LINC01778-208ENST00000635288 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
LINC01778-208ENST00000635288 LOC105371045A0A1W2PR82 267 aa12.65□□□□□ -0.38
LINC01778-208ENST00000635288 TOP2AP11388 1531 aaKnown RBP12.64□□□□□ -0.39
LINC01778-208ENST00000635288 AQRO60306 1485 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC01778-208ENST00000635288 KIF13AQ9H1H9 1805 aa12.61□□□□□ -0.39
LINC01778-208ENST00000635288 FBLN2P98095 1184 aa12.61□□□□□ -0.39
LINC01778-208ENST00000635288 GAPVD1Q14C86 1478 aa12.59□□□□□ -0.39
LINC01778-208ENST00000635288 GABBR2O75899 941 aa12.58□□□□□ -0.4
LINC01778-208ENST00000635288 SLC24A1O60721 1099 aa12.57□□□□□ -0.4
LINC01778-208ENST00000635288 MAGI1Q96QZ7 1491 aaPredicted RBP12.56□□□□□ -0.4
LINC01778-208ENST00000635288 SNAPC4Q5SXM2 1469 aa12.53□□□□□ -0.4
LINC01778-208ENST00000635288 C19orf67A6NJJ6 358 aa12.53□□□□□ -0.4
LINC01778-208ENST00000635288 POLA1P09884 1462 aaPredicted RBP12.53□□□□□ -0.4
LINC01778-208ENST00000635288 PRKAR2AP13861 404 aaKnown RBP12.5□□□□□ -0.41
LINC01778-208ENST00000635288 SYNJ2O15056 1496 aa12.5□□□□□ -0.41
LINC01778-208ENST00000635288 ERCC6L2Q5T890 1561 aa12.47□□□□□ -0.41
LINC01778-208ENST00000635288 CHMP7Q8WUX9 453 aaPredicted RBP12.47□□□□□ -0.41
LINC01778-208ENST00000635288 EEA1Q15075 1411 aa12.45□□□□□ -0.42
LINC01778-208ENST00000635288 GRIN2BQ13224 1484 aa12.45□□□□□ -0.42
LINC01778-208ENST00000635288 PBRM1Q86U86 1689 aa12.45□□□□□ -0.42
LINC01778-208ENST00000635288 KDM4FA0A1W2PPD8 638 aa12.43□□□□□ -0.42
LINC01778-208ENST00000635288 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
LINC01778-208ENST00000635288 SOGA1O94964 1423 aa12.42□□□□□ -0.42
LINC01778-208ENST00000635288 CCDC88BA6NC98 1476 aa12.41□□□□□ -0.42
LINC01778-208ENST00000635288 RAD54L2Q9Y4B4 1467 aa12.41□□□□□ -0.42
LINC01778-208ENST00000635288 KDM6BO15054 1643 aa12.41□□□□□ -0.42
LINC01778-208ENST00000635288 SHROOM2Q13796 1616 aa12.38□□□□□ -0.43
LINC01778-208ENST00000635288 PPARGC1BQ86YN6 1023 aaKnown RBP12.38□□□□□ -0.43
LINC01778-208ENST00000635288 FAM9AQ8IZU1 332 aaPredicted RBP12.37□□□□□ -0.43
LINC01778-208ENST00000635288 CEP170Q5SW79 1584 aa12.37□□□□□ -0.43
LINC01778-208ENST00000635288 ABCC10Q5T3U5 1492 aa12.36□□□□□ -0.43
LINC01778-208ENST00000635288 WRNQ14191 1432 aaPredicted RBP eCLIP12.35□□□□□ -0.43
LINC01778-208ENST00000635288 DIP2BQ9P265 1576 aa12.35□□□□□ -0.43
LINC01778-208ENST00000635288 HECW2Q9P2P5 1572 aa12.35□□□□□ -0.43
LINC01778-208ENST00000635288 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
LINC01778-208ENST00000635288 MAPKBP1O60336 1514 aa12.34□□□□□ -0.43
LINC01778-208ENST00000635288 MKRN4PQ13434 485 aaPredicted RBP12.33□□□□□ -0.44
LINC01778-208ENST00000635288 SPDYE4A6NLX3 237 aa12.3□□□□□ -0.44
LINC01778-208ENST00000635288 CLEC11AQ9Y240 323 aa12.3□□□□□ -0.44
LINC01778-208ENST00000635288 ABCA5Q8WWZ7 1642 aa12.29□□□□□ -0.44
LINC01778-208ENST00000635288 SPDYE1Q8NFV5 336 aaPredicted RBP12.29□□□□□ -0.44
LINC01778-208ENST00000635288 TNIKQ9UKE5 1360 aa12.29□□□□□ -0.44
LINC01778-208ENST00000635288 NUP160Q12769 1436 aa12.28□□□□□ -0.44
LINC01778-208ENST00000635288 GRIN2AQ12879 1464 aa12.28□□□□□ -0.44
LINC01778-208ENST00000635288 TSPOAP1O95153 1857 aa12.28□□□□□ -0.44
LINC01778-208ENST00000635288 POTEIP0CG38 1075 aa12.28□□□□□ -0.44
LINC01778-208ENST00000635288 FBXO41Q8TF61 875 aa12.28□□□□□ -0.44
LINC01778-208ENST00000635288 SPDYE2BA6NHP3 402 aa12.27□□□□□ -0.45
LINC01778-208ENST00000635288 SPDYE6P0CI01 402 aa12.27□□□□□ -0.45
LINC01778-208ENST00000635288 SPDYE2Q495Y8 402 aa12.27□□□□□ -0.45
LINC01778-208ENST00000635288 ADGRL1O94910 1474 aa12.27□□□□□ -0.45
LINC01778-208ENST00000635288 FAM69CQ0P6D2 419 aa12.26□□□□□ -0.45
LINC01778-208ENST00000635288 ADAMTS12P58397 1594 aa12.24□□□□□ -0.45
LINC01778-208ENST00000635288 PELP1Q8IZL8 1130 aaKnown RBP12.24□□□□□ -0.45
LINC01778-208ENST00000635288 FBXO3Q9UK99 471 aa12.23□□□□□ -0.45
LINC01778-208ENST00000635288 CUX1P39880 1505 aa12.22□□□□□ -0.45
LINC01778-208ENST00000635288 ABCA10Q8WWZ4 1543 aa12.21□□□□□ -0.45
LINC01778-208ENST00000635288 GOLGA3Q08378 1498 aa12.21□□□□□ -0.45
LINC01778-208ENST00000635288 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
LINC01778-208ENST00000635288 PROM2Q8N271 834 aa12.2□□□□□ -0.46
LINC01778-208ENST00000635288 NPM1P06748 294 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC01778-208ENST00000635288 ADCY10Q96PN6 1610 aa12.18□□□□□ -0.46
LINC01778-208ENST00000635288 LMTK3Q96Q04 1460 aa12.16□□□□□ -0.46
LINC01778-208ENST00000635288 CCER1Q8TC90 406 aaPredicted RBP12.16□□□□□ -0.46
LINC01778-208ENST00000635288 PRG4Q92954 1404 aaPredicted RBP12.15□□□□□ -0.46
LINC01778-208ENST00000635288 PPRC1Q5VV67 1664 aaKnown RBP12.14□□□□□ -0.47
LINC01778-208ENST00000635288 CHADLQ6NUI6 762 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms