RNA–Protein interactions for RNA: ENST00000635288.1

LINC01778-208, Transcript of long intergenic non-protein coding RNA 1778, humanhuman

TSL 5 BASIC

Gene LINC01778, Length 1,095 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01778-208ENST00000635288 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
LINC01778-208ENST00000635288 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
LINC01778-208ENST00000635288 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
LINC01778-208ENST00000635288 PHF23Q9BUL5 403 aaPredicted RBP20.04■□□□□ 0.8
LINC01778-208ENST00000635288 POTEDQ86YR6 584 aa19.42■□□□□ 0.7
LINC01778-208ENST00000635288 FOXD1Q16676 465 aa19.14■□□□□ 0.65
LINC01778-208ENST00000635288 MSH5O43196 834 aa18.32■□□□□ 0.52
LINC01778-208ENST00000635288 PIAS4Q8N2W9 510 aaPredicted RBP17.67■□□□□ 0.42
LINC01778-208ENST00000635288 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
LINC01778-208ENST00000635288 ADRA2BP18089 450 aa17.07■□□□□ 0.32
LINC01778-208ENST00000635288 PLPPR3Q6T4P5 718 aa16.92■□□□□ 0.3
LINC01778-208ENST00000635288 NISCHQ9Y2I1 1504 aa16.9■□□□□ 0.3
LINC01778-208ENST00000635288 CACNB1Q02641 598 aaPredicted RBP16.28■□□□□ 0.2
LINC01778-208ENST00000635288 DMRT2Q9Y5R5 561 aa16.06■□□□□ 0.16
LINC01778-208ENST00000635288 ABCC9O60706 1549 aa16■□□□□ 0.15
LINC01778-208ENST00000635288 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
LINC01778-208ENST00000635288 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
LINC01778-208ENST00000635288 CCDC180Q9P1Z9 1646 aa15.62■□□□□ 0.09
LINC01778-208ENST00000635288 RNF39Q9H2S5 420 aa15.52■□□□□ 0.08
LINC01778-208ENST00000635288 DNAJC5BQ9UF47 199 aa15.51■□□□□ 0.07
LINC01778-208ENST00000635288 DCAF8L1A6NGE4 600 aa15.46■□□□□ 0.07
LINC01778-208ENST00000635288 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
LINC01778-208ENST00000635288 KCNA4P22459 653 aa15.12■□□□□ 0.01
LINC01778-208ENST00000635288 RB1CC1Q8TDY2 1594 aa15.11■□□□□ 0.01
LINC01778-208ENST00000635288 HOXD11P31277 338 aaPredicted RBP15.1■□□□□ 0.01
LINC01778-208ENST00000635288 POTEHQ6S545 545 aa15.05■□□□□ -0
LINC01778-208ENST00000635288 DNAJC5Q9H3Z4 198 aa14.85□□□□□ -0.03
LINC01778-208ENST00000635288 NACADO15069 1562 aa14.85□□□□□ -0.03
LINC01778-208ENST00000635288 UNC13AQ9UPW8 1703 aa14.81□□□□□ -0.04
LINC01778-208ENST00000635288 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
LINC01778-208ENST00000635288 RNF216Q9NWF9 866 aaPredicted RBP14.75□□□□□ -0.05
LINC01778-208ENST00000635288 PPP4R3CPQ6ZMV5 832 aa14.73□□□□□ -0.05
LINC01778-208ENST00000635288 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
LINC01778-208ENST00000635288 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
LINC01778-208ENST00000635288 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
LINC01778-208ENST00000635288 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
LINC01778-208ENST00000635288 SHROOM4Q9ULL8 1493 aa14.54□□□□□ -0.08
LINC01778-208ENST00000635288 CC2D2AQ9P2K1 1620 aa14.52□□□□□ -0.08
LINC01778-208ENST00000635288 MYO15BQ96JP2 1530 aa14.48□□□□□ -0.09
LINC01778-208ENST00000635288 SLC4A1APQ9BWU0 796 aaKnown RBP14.48□□□□□ -0.09
LINC01778-208ENST00000635288 NCBP3Q53F19 620 aaKnown RBP14.47□□□□□ -0.09
LINC01778-208ENST00000635288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.41□□□□□ -0.1
LINC01778-208ENST00000635288 EIF4G1Q04637 1599 aaKnown RBP14.34□□□□□ -0.11
LINC01778-208ENST00000635288 NPM3O75607 178 aaKnown RBP14.33□□□□□ -0.12
LINC01778-208ENST00000635288 CSRNP3Q8WYN3 585 aa14.33□□□□□ -0.12
LINC01778-208ENST00000635288 DCAF8L2P0C7V8 631 aa14.29□□□□□ -0.12
LINC01778-208ENST00000635288 CUX2O14529 1486 aa14.22□□□□□ -0.13
LINC01778-208ENST00000635288 DSG3P32926 999 aa14.21□□□□□ -0.13
LINC01778-208ENST00000635288 CAPN15O75808 1086 aa14.1□□□□□ -0.15
LINC01778-208ENST00000635288 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
LINC01778-208ENST00000635288 DCAF1Q9Y4B6 1507 aa14.03□□□□□ -0.16
LINC01778-208ENST00000635288 SCRIBQ14160 1630 aa14□□□□□ -0.17
LINC01778-208ENST00000635288 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
LINC01778-208ENST00000635288 ZBTB22O15209 634 aa13.95□□□□□ -0.18
LINC01778-208ENST00000635288 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
LINC01778-208ENST00000635288 ZCCHC6Q5VYS8 1495 aaKnown RBP13.87□□□□□ -0.19
LINC01778-208ENST00000635288 TRIM41Q8WV44 630 aa13.79□□□□□ -0.2
LINC01778-208ENST00000635288 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
LINC01778-208ENST00000635288 THOC2Q8NI27 1593 aaKnown RBP13.7□□□□□ -0.22
LINC01778-208ENST00000635288 CHRDL2Q6WN34 429 aa13.68□□□□□ -0.22
LINC01778-208ENST00000635288 SP7Q8TDD2 431 aaPredicted RBP13.68□□□□□ -0.22
LINC01778-208ENST00000635288 ABCB7O75027 752 aa13.66□□□□□ -0.22
LINC01778-208ENST00000635288 NCAPD3P42695 1498 aa13.66□□□□□ -0.22
LINC01778-208ENST00000635288 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
LINC01778-208ENST00000635288 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
LINC01778-208ENST00000635288 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
LINC01778-208ENST00000635288 HMGXB3Q12766 1538 aa13.56□□□□□ -0.24
LINC01778-208ENST00000635288 APLP2Q06481 763 aa13.56□□□□□ -0.24
LINC01778-208ENST00000635288 NESP48681 1621 aa13.55□□□□□ -0.24
LINC01778-208ENST00000635288 LAMC3Q9Y6N6 1575 aa13.52□□□□□ -0.25
LINC01778-208ENST00000635288 KIF21AQ7Z4S6 1674 aa13.5□□□□□ -0.25
LINC01778-208ENST00000635288 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
LINC01778-208ENST00000635288 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
LINC01778-208ENST00000635288 BAZ1AQ9NRL2 1556 aaPredicted RBP13.47□□□□□ -0.25
LINC01778-208ENST00000635288 SUPT5HO00267 1087 aaKnown RBP13.47□□□□□ -0.25
LINC01778-208ENST00000635288 SLC4A2P04920 1241 aa13.4□□□□□ -0.26
LINC01778-208ENST00000635288 PDS5BQ9NTI5 1447 aa13.39□□□□□ -0.27
LINC01778-208ENST00000635288 SMARCA4P51532 1647 aa13.36□□□□□ -0.27
LINC01778-208ENST00000635288 WDR62O43379 1518 aa13.34□□□□□ -0.27
LINC01778-208ENST00000635288 BAZ1BQ9UIG0 1483 aaKnown RBP13.33□□□□□ -0.28
LINC01778-208ENST00000635288 RIMBP3CA6NJZ7 1639 aa13.32□□□□□ -0.28
LINC01778-208ENST00000635288 RIMBP3BA6NNM3 1639 aa13.32□□□□□ -0.28
LINC01778-208ENST00000635288 RIMBP3Q9UFD9 1639 aa13.32□□□□□ -0.28
LINC01778-208ENST00000635288 MRC2Q9UBG0 1479 aa13.32□□□□□ -0.28
LINC01778-208ENST00000635288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
LINC01778-208ENST00000635288 HNRNPUL2Q1KMD3 747 aaKnown RBP13.32□□□□□ -0.28
LINC01778-208ENST00000635288 OSCARQ8IYS5 282 aa13.32□□□□□ -0.28
LINC01778-208ENST00000635288 PEG3Q9GZU2 1588 aa13.3□□□□□ -0.28
LINC01778-208ENST00000635288 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
LINC01778-208ENST00000635288 ARHGEF11O15085 1522 aa13.18□□□□□ -0.3
LINC01778-208ENST00000635288 HAX1O00165 279 aa13.18□□□□□ -0.3
LINC01778-208ENST00000635288 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
LINC01778-208ENST00000635288 CADPSQ9ULU8 1353 aa13.16□□□□□ -0.3
LINC01778-208ENST00000635288 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
LINC01778-208ENST00000635288 CEP164Q9UPV0 1460 aa13.13□□□□□ -0.31
LINC01778-208ENST00000635288 ATXN8OSP0DMR3 200 aa13.13□□□□□ -0.31
LINC01778-208ENST00000635288 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
LINC01778-208ENST00000635288 POLA2Q14181 598 aa13.07□□□□□ -0.32
LINC01778-208ENST00000635288 HRCP23327 699 aa13.02□□□□□ -0.33
LINC01778-208ENST00000635288 FANCD2Q9BXW9 1451 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms