RNA–Protein interactions for RNA: ENST00000629716.2

LINC01515-220, Transcript of long intergenic non-protein coding RNA 1515, humanhuman

TSL 5

Gene LINC01515, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01515-220ENST00000629716 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
LINC01515-220ENST00000629716 SPDYE2Q495Y8 402 aa15.97■□□□□ 0.15
LINC01515-220ENST00000629716 PIP4P2Q8N4L2 257 aa15.96■□□□□ 0.15
LINC01515-220ENST00000629716 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
LINC01515-220ENST00000629716 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
LINC01515-220ENST00000629716 CUX1P39880 1505 aa15.9■□□□□ 0.14
LINC01515-220ENST00000629716 SYNJ1O43426 1573 aa15.89■□□□□ 0.13
LINC01515-220ENST00000629716 TOP2BQ02880 1626 aa15.88■□□□□ 0.13
LINC01515-220ENST00000629716 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
LINC01515-220ENST00000629716 FXR2P51116 673 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC01515-220ENST00000629716 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
LINC01515-220ENST00000629716 URB2Q14146 1524 aaKnown RBP15.87■□□□□ 0.13
LINC01515-220ENST00000629716 TOPBP1Q92547 1522 aa15.87■□□□□ 0.13
LINC01515-220ENST00000629716 BIVM-ERCC5R4GMW8 1640 aa15.86■□□□□ 0.13
LINC01515-220ENST00000629716 FGD5Q6ZNL6 1462 aa15.8■□□□□ 0.12
LINC01515-220ENST00000629716 WDR62O43379 1518 aa15.78■□□□□ 0.12
LINC01515-220ENST00000629716 ZNF692Q9BU19 519 aaPredicted RBP15.77■□□□□ 0.12
LINC01515-220ENST00000629716 SSUH2Q9Y2M2 353 aa15.77■□□□□ 0.12
LINC01515-220ENST00000629716 SOGA1O94964 1423 aa15.77■□□□□ 0.11
LINC01515-220ENST00000629716 THOC2Q8NI27 1593 aaKnown RBP15.76■□□□□ 0.11
LINC01515-220ENST00000629716 POLA1P09884 1462 aaPredicted RBP15.76■□□□□ 0.11
LINC01515-220ENST00000629716 SP7Q8TDD2 431 aaPredicted RBP15.74■□□□□ 0.11
LINC01515-220ENST00000629716 FAM9AQ8IZU1 332 aaPredicted RBP15.72■□□□□ 0.11
LINC01515-220ENST00000629716 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.1
LINC01515-220ENST00000629716 SPDYE1Q8NFV5 336 aaPredicted RBP15.7■□□□□ 0.1
LINC01515-220ENST00000629716 EEA1Q15075 1411 aa15.69■□□□□ 0.1
LINC01515-220ENST00000629716 IFT140Q96RY7 1462 aa15.68■□□□□ 0.1
LINC01515-220ENST00000629716 KIF27Q86VH2 1401 aa15.68■□□□□ 0.1
LINC01515-220ENST00000629716 CUX2O14529 1486 aa15.67■□□□□ 0.1
LINC01515-220ENST00000629716 ABCA10Q8WWZ4 1543 aa15.67■□□□□ 0.1
LINC01515-220ENST00000629716 HAX1O00165 279 aa15.66■□□□□ 0.1
LINC01515-220ENST00000629716 CLEC11AQ9Y240 323 aa15.65■□□□□ 0.1
LINC01515-220ENST00000629716 RUSC2Q8N2Y8 1516 aa15.63■□□□□ 0.09
LINC01515-220ENST00000629716 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
LINC01515-220ENST00000629716 TARBP1Q13395 1621 aaKnown RBP15.61■□□□□ 0.09
LINC01515-220ENST00000629716 EHMT2Q96KQ7 1210 aa15.58■□□□□ 0.08
LINC01515-220ENST00000629716 PRKAR2AP13861 404 aaKnown RBP15.57■□□□□ 0.08
LINC01515-220ENST00000629716 GAPVD1Q14C86 1478 aa15.57■□□□□ 0.08
LINC01515-220ENST00000629716 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
LINC01515-220ENST00000629716 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.08
LINC01515-220ENST00000629716 IGF1RP08069 1367 aa15.54■□□□□ 0.08
LINC01515-220ENST00000629716 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
LINC01515-220ENST00000629716 ABCA5Q8WWZ7 1642 aa15.51■□□□□ 0.07
LINC01515-220ENST00000629716 EVX2Q03828 476 aa15.51■□□□□ 0.07
LINC01515-220ENST00000629716 GRIN2BQ13224 1484 aa15.5■□□□□ 0.07
LINC01515-220ENST00000629716 CARMIL1Q5VZK9 1371 aa15.49■□□□□ 0.07
LINC01515-220ENST00000629716 ERICH3Q5RHP9 1530 aa15.48■□□□□ 0.07
LINC01515-220ENST00000629716 LOC105371045A0A1W2PR82 267 aa15.48■□□□□ 0.07
LINC01515-220ENST00000629716 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.07
LINC01515-220ENST00000629716 PRXQ9BXM0 1461 aa15.45■□□□□ 0.06
LINC01515-220ENST00000629716 UBTFP17480 764 aaKnown RBP15.44■□□□□ 0.06
LINC01515-220ENST00000629716 GOLGA3Q08378 1498 aa15.43■□□□□ 0.06
LINC01515-220ENST00000629716 CUL7Q14999 1698 aa15.42■□□□□ 0.06
LINC01515-220ENST00000629716 RAPGEF2Q9Y4G8 1499 aa15.42■□□□□ 0.06
LINC01515-220ENST00000629716 KIF21BO75037 1637 aa15.42■□□□□ 0.06
LINC01515-220ENST00000629716 FHAD1B1AJZ9 1412 aa15.42■□□□□ 0.06
LINC01515-220ENST00000629716 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
LINC01515-220ENST00000629716 PRR29P0C7W0 189 aa15.41■□□□□ 0.06
LINC01515-220ENST00000629716 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
LINC01515-220ENST00000629716 MAGI1Q96QZ7 1491 aaPredicted RBP15.4■□□□□ 0.06
LINC01515-220ENST00000629716 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
LINC01515-220ENST00000629716 CHADLQ6NUI6 762 aa15.37■□□□□ 0.05
LINC01515-220ENST00000629716 C19orf67A6NJJ6 358 aa15.36■□□□□ 0.05
LINC01515-220ENST00000629716 ADAMTS12P58397 1594 aa15.35■□□□□ 0.05
LINC01515-220ENST00000629716 TNIKQ9UKE5 1360 aa15.34■□□□□ 0.05
LINC01515-220ENST00000629716 SYNJ2O15056 1496 aa15.33■□□□□ 0.05
LINC01515-220ENST00000629716 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
LINC01515-220ENST00000629716 RANGAP1P46060 587 aaPredicted RBP15.23■□□□□ 0.03
LINC01515-220ENST00000629716 CEP162Q5TB80 1403 aa15.2■□□□□ 0.02
LINC01515-220ENST00000629716 NUP160Q12769 1436 aa15.18■□□□□ 0.02
LINC01515-220ENST00000629716 KIAA0586Q9BVV6 1533 aa15.18■□□□□ 0.02
LINC01515-220ENST00000629716 CLIP1P30622 1438 aa15.17■□□□□ 0.02
LINC01515-220ENST00000629716 SPDYE4A6NLX3 237 aa15.16■□□□□ 0.02
LINC01515-220ENST00000629716 FARP1Q9Y4F1 1045 aaPredicted RBP15.16■□□□□ 0.02
LINC01515-220ENST00000629716 CHD1O14646 1710 aa15.16■□□□□ 0.02
LINC01515-220ENST00000629716 CTTNBP2Q8WZ74 1663 aa15.16■□□□□ 0.02
LINC01515-220ENST00000629716 CEP170Q5SW79 1584 aa15.15■□□□□ 0.02
LINC01515-220ENST00000629716 GABBR2O75899 941 aa15.14■□□□□ 0.01
LINC01515-220ENST00000629716 IQGAP2Q13576 1575 aa15.14■□□□□ 0.01
LINC01515-220ENST00000629716 JPH4Q96JJ6 628 aa15.12■□□□□ 0.01
LINC01515-220ENST00000629716 STAG3Q9UJ98 1225 aa15.1■□□□□ 0.01
LINC01515-220ENST00000629716 P3H3Q8IVL6 736 aa15.09■□□□□ 0.01
LINC01515-220ENST00000629716 EFCAB5A4FU69 1503 aa15.07■□□□□ 0
LINC01515-220ENST00000629716 UGGT2Q9NYU1 1516 aa15.07■□□□□ 0
LINC01515-220ENST00000629716 CD44P16070 742 aaKnown RBP15.06■□□□□ 0
LINC01515-220ENST00000629716 CARMIL2Q6F5E8 1435 aa15.06■□□□□ 0
LINC01515-220ENST00000629716 ARHGAP35Q9NRY4 1499 aa15.06■□□□□ 0
LINC01515-220ENST00000629716 CREBZFQ9NS37 354 aa15.04■□□□□ -0
LINC01515-220ENST00000629716 CLASP1Q7Z460 1538 aa15.02■□□□□ -0
LINC01515-220ENST00000629716 PRG4Q92954 1404 aaPredicted RBP15.01□□□□□ -0.01
LINC01515-220ENST00000629716 ARAP1Q96P48 1450 aa15.01□□□□□ -0.01
LINC01515-220ENST00000629716 FHOD3Q2V2M9 1422 aa15□□□□□ -0.01
LINC01515-220ENST00000629716 SAMD9Q5K651 1589 aa14.99□□□□□ -0.01
LINC01515-220ENST00000629716 DISP1Q96F81 1524 aa14.99□□□□□ -0.01
LINC01515-220ENST00000629716 VPS8Q8N3P4 1428 aa14.99□□□□□ -0.01
LINC01515-220ENST00000629716 FMN1Q68DA7 1419 aa14.98□□□□□ -0.01
LINC01515-220ENST00000629716 TTBK1Q5TCY1 1321 aaPredicted RBP14.97□□□□□ -0.01
LINC01515-220ENST00000629716 KIAA0556O60303 1618 aa14.96□□□□□ -0.01
LINC01515-220ENST00000629716 SHROOM2Q13796 1616 aa14.95□□□□□ -0.02
LINC01515-220ENST00000629716 ATP1B4Q9UN42 357 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms