RNA–Protein interactions for RNA: ENST00000629716.2

LINC01515-220, Transcript of long intergenic non-protein coding RNA 1515, humanhuman

TSL 5

Gene LINC01515, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01515-220ENST00000629716 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
LINC01515-220ENST00000629716 CHIC1Q5VXU3 224 aa27.93■■■□□ 2.06
LINC01515-220ENST00000629716 SENP3Q9H4L4 574 aaPredicted RBP25.12■■□□□ 1.61
LINC01515-220ENST00000629716 PHF23Q9BUL5 403 aaPredicted RBP24.8■■□□□ 1.56
LINC01515-220ENST00000629716 FOXD1Q16676 465 aa23.43■■□□□ 1.34
LINC01515-220ENST00000629716 PLPPR3Q6T4P5 718 aa22.28■■□□□ 1.16
LINC01515-220ENST00000629716 NISCHQ9Y2I1 1504 aa22.04■■□□□ 1.12
LINC01515-220ENST00000629716 MSH5O43196 834 aa21.92■■□□□ 1.1
LINC01515-220ENST00000629716 PPP6R1Q9UPN7 881 aa21.89■■□□□ 1.09
LINC01515-220ENST00000629716 PIAS4Q8N2W9 510 aaPredicted RBP21.85■■□□□ 1.09
LINC01515-220ENST00000629716 ADRA2BP18089 450 aa21.8■■□□□ 1.08
LINC01515-220ENST00000629716 POTEDQ86YR6 584 aa21.48■■□□□ 1.03
LINC01515-220ENST00000629716 MAPK8IP2Q13387 824 aaPredicted RBP20.04■□□□□ 0.8
LINC01515-220ENST00000629716 SCAF1Q9H7N4 1312 aaKnown RBP19.94■□□□□ 0.78
LINC01515-220ENST00000629716 DMRT2Q9Y5R5 561 aa19.93■□□□□ 0.78
LINC01515-220ENST00000629716 PPP4R3CPQ6ZMV5 832 aa19.54■□□□□ 0.72
LINC01515-220ENST00000629716 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.69
LINC01515-220ENST00000629716 HOXD11P31277 338 aaPredicted RBP19.19■□□□□ 0.66
LINC01515-220ENST00000629716 CNKSR2Q8WXI2 1034 aa19.18■□□□□ 0.66
LINC01515-220ENST00000629716 DCAF8L1A6NGE4 600 aa19.05■□□□□ 0.64
LINC01515-220ENST00000629716 RNF216Q9NWF9 866 aaPredicted RBP19.02■□□□□ 0.64
LINC01515-220ENST00000629716 CACNB1Q02641 598 aaPredicted RBP18.82■□□□□ 0.6
LINC01515-220ENST00000629716 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
LINC01515-220ENST00000629716 RNF39Q9H2S5 420 aa18.72■□□□□ 0.59
LINC01515-220ENST00000629716 ABCC9O60706 1549 aa18.56■□□□□ 0.56
LINC01515-220ENST00000629716 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
LINC01515-220ENST00000629716 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
LINC01515-220ENST00000629716 C1QBPQ07021 282 aaKnown RBP18.44■□□□□ 0.54
LINC01515-220ENST00000629716 ZCCHC6Q5VYS8 1495 aaKnown RBP18.43■□□□□ 0.54
LINC01515-220ENST00000629716 DCAF8L2P0C7V8 631 aa18.39■□□□□ 0.53
LINC01515-220ENST00000629716 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
LINC01515-220ENST00000629716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.23■□□□□ 0.519e-6■□□□□ 10.7
LINC01515-220ENST00000629716 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
LINC01515-220ENST00000629716 NACADO15069 1562 aa18.12■□□□□ 0.49
LINC01515-220ENST00000629716 KCNA4P22459 653 aa18.11■□□□□ 0.49
LINC01515-220ENST00000629716 RB1CC1Q8TDY2 1594 aa18.03■□□□□ 0.48
LINC01515-220ENST00000629716 U3KPZ7 1027 aaPredicted RBP17.89■□□□□ 0.45
LINC01515-220ENST00000629716 SHROOM4Q9ULL8 1493 aa17.78■□□□□ 0.44
LINC01515-220ENST00000629716 SCRIBQ14160 1630 aa17.72■□□□□ 0.43
LINC01515-220ENST00000629716 SLC4A2P04920 1241 aa17.7■□□□□ 0.42
LINC01515-220ENST00000629716 SPINK5Q9NQ38 1064 aaPredicted RBP17.63■□□□□ 0.41
LINC01515-220ENST00000629716 CAPN15O75808 1086 aa17.57■□□□□ 0.4
LINC01515-220ENST00000629716 DSG3P32926 999 aa17.52■□□□□ 0.4
LINC01515-220ENST00000629716 UNC13AQ9UPW8 1703 aa17.51■□□□□ 0.39
LINC01515-220ENST00000629716 PABPN1Q86U42 306 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC01515-220ENST00000629716 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
LINC01515-220ENST00000629716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
LINC01515-220ENST00000629716 APLP2Q06481 763 aa17.34■□□□□ 0.37
LINC01515-220ENST00000629716 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
LINC01515-220ENST00000629716 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
LINC01515-220ENST00000629716 ZNF219Q9P2Y4 722 aaPredicted RBP17.25■□□□□ 0.35
LINC01515-220ENST00000629716 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
LINC01515-220ENST00000629716 ABCB7O75027 752 aa17.16■□□□□ 0.34
LINC01515-220ENST00000629716 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
LINC01515-220ENST00000629716 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
LINC01515-220ENST00000629716 SLC4A1APQ9BWU0 796 aaKnown RBP17.07■□□□□ 0.32
LINC01515-220ENST00000629716 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
LINC01515-220ENST00000629716 SUPT5HO00267 1087 aaKnown RBP17.02■□□□□ 0.32
LINC01515-220ENST00000629716 RSF1Q96T23 1441 aaPredicted RBP16.99■□□□□ 0.31
LINC01515-220ENST00000629716 MROH2BQ7Z745 1585 aa16.98■□□□□ 0.31
LINC01515-220ENST00000629716 SMARCA4P51532 1647 aa16.97■□□□□ 0.31
LINC01515-220ENST00000629716 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
LINC01515-220ENST00000629716 FOXD4L1Q9NU39 408 aa16.9■□□□□ 0.3
LINC01515-220ENST00000629716 POLA2Q14181 598 aa16.84■□□□□ 0.29
LINC01515-220ENST00000629716 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
LINC01515-220ENST00000629716 POTEHQ6S545 545 aa16.81■□□□□ 0.28
LINC01515-220ENST00000629716 WIZO95785 1651 aa16.81■□□□□ 0.28
LINC01515-220ENST00000629716 ATAD2BQ9ULI0 1458 aa16.8■□□□□ 0.28
LINC01515-220ENST00000629716 PEG3Q9GZU2 1588 aa16.78■□□□□ 0.28
LINC01515-220ENST00000629716 CC2D2AQ9P2K1 1620 aa16.76■□□□□ 0.27
LINC01515-220ENST00000629716 ATF5Q9Y2D1 282 aaPredicted RBP16.73■□□□□ 0.27
LINC01515-220ENST00000629716 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
LINC01515-220ENST00000629716 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
LINC01515-220ENST00000629716 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
LINC01515-220ENST00000629716 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
LINC01515-220ENST00000629716 ZBTB22O15209 634 aa16.66■□□□□ 0.26
LINC01515-220ENST00000629716 HMGXB3Q12766 1538 aa16.65■□□□□ 0.26
LINC01515-220ENST00000629716 CCDC88BA6NC98 1476 aa16.5■□□□□ 0.23
LINC01515-220ENST00000629716 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.23
LINC01515-220ENST00000629716 ATXN8OSP0DMR3 200 aa16.4■□□□□ 0.22
LINC01515-220ENST00000629716 CHRDL2Q6WN34 429 aa16.35■□□□□ 0.21
LINC01515-220ENST00000629716 AKT1S1Q96B36 256 aa16.31■□□□□ 0.2
LINC01515-220ENST00000629716 CADPSQ9ULU8 1353 aa16.29■□□□□ 0.2
LINC01515-220ENST00000629716 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
LINC01515-220ENST00000629716 CFTRP13569 1480 aa16.26■□□□□ 0.19
LINC01515-220ENST00000629716 LAMC3Q9Y6N6 1575 aa16.19■□□□□ 0.18
LINC01515-220ENST00000629716 NESP48681 1621 aa16.17■□□□□ 0.18
LINC01515-220ENST00000629716 REM2Q8IYK8 340 aaPredicted RBP16.17■□□□□ 0.18
LINC01515-220ENST00000629716 PDS5BQ9NTI5 1447 aa16.14■□□□□ 0.17
LINC01515-220ENST00000629716 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
LINC01515-220ENST00000629716 PRDM2Q13029 1718 aa16.08■□□□□ 0.16
LINC01515-220ENST00000629716 TRIM41Q8WV44 630 aa16.06■□□□□ 0.16
LINC01515-220ENST00000629716 FBLN2P98095 1184 aa16.04■□□□□ 0.16
LINC01515-220ENST00000629716 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
LINC01515-220ENST00000629716 WRNQ14191 1432 aaPredicted RBP eCLIP16.03■□□□□ 0.16
LINC01515-220ENST00000629716 ABCC8Q09428 1581 aa16.01■□□□□ 0.15
LINC01515-220ENST00000629716 ERCC6Q03468 1493 aa16■□□□□ 0.15
LINC01515-220ENST00000629716 PITPNM1O00562 1244 aa15.98■□□□□ 0.15
LINC01515-220ENST00000629716 SPDYE2BA6NHP3 402 aa15.97■□□□□ 0.15
LINC01515-220ENST00000629716 SPDYE6P0CI01 402 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms