RNA–Protein interactions for RNA: ENST00000629659.2

EWSR1-222, Transcript of EWS RNA binding protein 1, humanhuman

TSL 5 BASIC

Gene EWSR1, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-222ENST00000629659 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
EWSR1-222ENST00000629659 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
EWSR1-222ENST00000629659 SETD5Q9C0A6 1442 aa24.43■■□□□ 1.5
EWSR1-222ENST00000629659 BCANQ96GW7 911 aa24.42■■□□□ 1.5
EWSR1-222ENST00000629659 MAP3K1Q13233 1512 aa24.42■■□□□ 1.5
EWSR1-222ENST00000629659 DDX10Q13206 875 aaKnown RBP24.42■■□□□ 1.5
EWSR1-222ENST00000629659 FKBP8Q14318 412 aa24.41■■□□□ 1.5
EWSR1-222ENST00000629659 WDR97A6NE52 1622 aa24.4■■□□□ 1.5
EWSR1-222ENST00000629659 TIAM1Q13009 1591 aa24.4■■□□□ 1.5
EWSR1-222ENST00000629659 PPP1R15AO75807 674 aaPredicted RBP24.38■■□□□ 1.49
EWSR1-222ENST00000629659 SIN3AQ96ST3 1273 aa24.36■■□□□ 1.49
EWSR1-222ENST00000629659 RAD54L2Q9Y4B4 1467 aa24.35■■□□□ 1.49
EWSR1-222ENST00000629659 NESP48681 1621 aa24.34■■□□□ 1.49
EWSR1-222ENST00000629659 LRRC9Q6ZRR7 1453 aa24.32■■□□□ 1.48
EWSR1-222ENST00000629659 DNMBPQ6XZF7 1577 aa24.32■■□□□ 1.48
EWSR1-222ENST00000629659 PHLDB1Q86UU1 1377 aa24.32■■□□□ 1.48
EWSR1-222ENST00000629659 TIMELESSQ9UNS1 1208 aa24.31■■□□□ 1.48
EWSR1-222ENST00000629659 P3H3Q8IVL6 736 aa24.29■■□□□ 1.48
EWSR1-222ENST00000629659 TOPBP1Q92547 1522 aa24.29■■□□□ 1.48
EWSR1-222ENST00000629659 CCER2I3L3R5 266 aa24.27■■□□□ 1.48
EWSR1-222ENST00000629659 POLA1P09884 1462 aaPredicted RBP24.27■■□□□ 1.48
EWSR1-222ENST00000629659 ABCA10Q8WWZ4 1543 aa24.25■■□□□ 1.47
EWSR1-222ENST00000629659 PCF11O94913 1555 aaKnown RBP24.24■■□□□ 1.47
EWSR1-222ENST00000629659 NEFLP07196 543 aa24.23■■□□□ 1.47
EWSR1-222ENST00000629659 FAM50AQ14320 339 aaKnown RBP24.23■■□□□ 1.47
EWSR1-222ENST00000629659 RBM19Q9Y4C8 960 aaKnown RBP24.22■■□□□ 1.47
EWSR1-222ENST00000629659 CFAP43Q8NDM7 1665 aa24.19■■□□□ 1.46
EWSR1-222ENST00000629659 TRIM52Q96A61 297 aa24.19■■□□□ 1.46
EWSR1-222ENST00000629659 FHOD3Q2V2M9 1422 aa24.18■■□□□ 1.46
EWSR1-222ENST00000629659 ANP32CO43423 234 aa24.18■■□□□ 1.46
EWSR1-222ENST00000629659 HIRIP3Q9BW71 556 aaPredicted RBP24.18■■□□□ 1.46
EWSR1-222ENST00000629659 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
EWSR1-222ENST00000629659 ATP1B4Q9UN42 357 aaPredicted RBP24.18■■□□□ 1.46
EWSR1-222ENST00000629659 CUL7Q14999 1698 aa24.13■■□□□ 1.45
EWSR1-222ENST00000629659 CTTNBP2Q8WZ74 1663 aa24.13■■□□□ 1.45
EWSR1-222ENST00000629659 URB2Q14146 1524 aaKnown RBP24.12■■□□□ 1.45
EWSR1-222ENST00000629659 BCL11AQ9H165 835 aa24.12■■□□□ 1.45
EWSR1-222ENST00000629659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.09■■□□□ 1.456e-6■□□□□ 11
EWSR1-222ENST00000629659 LAMC3Q9Y6N6 1575 aa24.07■■□□□ 1.44
EWSR1-222ENST00000629659 EFCAB5A4FU69 1503 aa24.07■■□□□ 1.44
EWSR1-222ENST00000629659 FYCO1Q9BQS8 1478 aa24.06■■□□□ 1.44
EWSR1-222ENST00000629659 CASKIN1Q8WXD9 1431 aa24.02■■□□□ 1.44
EWSR1-222ENST00000629659 DNAJC5BQ9UF47 199 aa24.02■■□□□ 1.44
EWSR1-222ENST00000629659 TDRD9Q8NDG6 1382 aaKnown RBP24.02■■□□□ 1.44
EWSR1-222ENST00000629659 TONSLQ96HA7 1378 aa24■■□□□ 1.43
EWSR1-222ENST00000629659 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
EWSR1-222ENST00000629659 AQRO60306 1485 aaKnown RBP eCLIP23.97■■□□□ 1.432e-7■■■□□ 18.8
EWSR1-222ENST00000629659 MSH5O43196 834 aa23.96■■□□□ 1.43
EWSR1-222ENST00000629659 KIF21AQ7Z4S6 1674 aa23.94■■□□□ 1.42
EWSR1-222ENST00000629659 GAPVD1Q14C86 1478 aa23.94■■□□□ 1.42
EWSR1-222ENST00000629659 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
EWSR1-222ENST00000629659 CCDC18Q5T9S5 1454 aa23.92■■□□□ 1.42
EWSR1-222ENST00000629659 FGD6Q6ZV73 1430 aa23.92■■□□□ 1.42
EWSR1-222ENST00000629659 FMN1Q68DA7 1419 aa23.92■■□□□ 1.42
EWSR1-222ENST00000629659 UACAQ9BZF9 1416 aa23.91■■□□□ 1.42
EWSR1-222ENST00000629659 LRRIQ1Q96JM4 1722 aa23.91■■□□□ 1.42
EWSR1-222ENST00000629659 SAMD9Q5K651 1589 aa23.89■■□□□ 1.42
EWSR1-222ENST00000629659 HFM1A2PYH4 1435 aa23.89■■□□□ 1.42
EWSR1-222ENST00000629659 PDS5BQ9NTI5 1447 aa23.89■■□□□ 1.42
EWSR1-222ENST00000629659 PTPRKQ15262 1439 aa23.88■■□□□ 1.41
EWSR1-222ENST00000629659 FANCIQ9NVI1 1328 aa23.88■■□□□ 1.41
EWSR1-222ENST00000629659 HNRNPUQ00839 825 aaKnown RBP eCLIP23.87■■□□□ 1.41
EWSR1-222ENST00000629659 KDM5BQ9UGL1 1544 aa23.85■■□□□ 1.41
EWSR1-222ENST00000629659 PTPN23Q9H3S7 1636 aa23.84■■□□□ 1.41
EWSR1-222ENST00000629659 MTUS2Q5JR59 1369 aa23.83■■□□□ 1.41
EWSR1-222ENST00000629659 CDK11AQ9UQ88 783 aaPredicted RBP23.82■■□□□ 1.4
EWSR1-222ENST00000629659 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
EWSR1-222ENST00000629659 NAIPQ13075 1403 aa23.8■■□□□ 1.4
EWSR1-222ENST00000629659 IRX6P78412 446 aaPredicted RBP23.8■■□□□ 1.4
EWSR1-222ENST00000629659 GRIN2BQ13224 1484 aa23.79■■□□□ 1.4
EWSR1-222ENST00000629659 WASHC2AQ641Q2 1341 aa23.76■■□□□ 1.39
EWSR1-222ENST00000629659 ERICH6BQ5W0A0 696 aa23.76■■□□□ 1.39
EWSR1-222ENST00000629659 NCOA2Q15596 1464 aa23.74■■□□□ 1.39
EWSR1-222ENST00000629659 PBRM1Q86U86 1689 aa23.73■■□□□ 1.39
EWSR1-222ENST00000629659 HSPA5P11021 654 aaKnown RBP23.72■■□□□ 1.39
EWSR1-222ENST00000629659 SUPT6HQ7KZ85 1726 aaKnown RBP23.71■■□□□ 1.39
EWSR1-222ENST00000629659 MYOM3Q5VTT5 1437 aa23.7■■□□□ 1.38
EWSR1-222ENST00000629659 THOC2Q8NI27 1593 aaKnown RBP23.69■■□□□ 1.38
EWSR1-222ENST00000629659 MAGI3Q5TCQ9 1506 aa23.68■■□□□ 1.38
EWSR1-222ENST00000629659 PPP4R2Q9NY27 417 aa23.68■■□□□ 1.38
EWSR1-222ENST00000629659 EHBP1L1Q8N3D4 1523 aa23.68■■□□□ 1.38
EWSR1-222ENST00000629659 CCDC184Q52MB2 194 aa23.65■■□□□ 1.38
EWSR1-222ENST00000629659 ERICH6Q7L0X2 663 aa23.63■■□□□ 1.37
EWSR1-222ENST00000629659 CNTLNQ9NXG0 1405 aa23.63■■□□□ 1.37
EWSR1-222ENST00000629659 DENND4BO75064 1496 aaPredicted RBP23.62■■□□□ 1.37
EWSR1-222ENST00000629659 UGGT2Q9NYU1 1516 aa23.62■■□□□ 1.37
EWSR1-222ENST00000629659 EIF4G2P78344 907 aaKnown RBP eCLIP23.62■■□□□ 1.37
EWSR1-222ENST00000629659 ADAMTS12P58397 1594 aa23.62■■□□□ 1.37
EWSR1-222ENST00000629659 IQGAP2Q13576 1575 aa23.61■■□□□ 1.37
EWSR1-222ENST00000629659 ARHGEF11O15085 1522 aa23.59■■□□□ 1.37
EWSR1-222ENST00000629659 HECW1Q76N89 1606 aa23.58■■□□□ 1.36
EWSR1-222ENST00000629659 PRKRIP1Q9H875 184 aaPredicted RBP23.57■■□□□ 1.36
EWSR1-222ENST00000629659 RRP7BPQ9NSQ0 103 aa23.57■■□□□ 1.36
EWSR1-222ENST00000629659 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
EWSR1-222ENST00000629659 ARID3CA6NKF2 412 aa23.55■■□□□ 1.36
EWSR1-222ENST00000629659 C11orf95C9JLR9 678 aaPredicted RBP23.55■■□□□ 1.36
EWSR1-222ENST00000629659 CDK13Q14004 1512 aaKnown RBP23.55■■□□□ 1.36
EWSR1-222ENST00000629659 NCOA1Q15788 1441 aa23.55■■□□□ 1.36
EWSR1-222ENST00000629659 ZBED9Q6R2W3 1325 aa23.54■■□□□ 1.36
EWSR1-222ENST00000629659 CCDC7Q96M83 1385 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms