RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 FGD5Q6ZNL6 1462 aa10.38□□□□□ -0.75
LINC00963-215ENST00000622972 RNF39Q9H2S5 420 aa10.36□□□□□ -0.75
LINC00963-215ENST00000622972 ARHGEF11O15085 1522 aa10.36□□□□□ -0.75
LINC00963-215ENST00000622972 CUX1P39880 1505 aa10.36□□□□□ -0.75
LINC00963-215ENST00000622972 CYB5RLQ6IPT4 315 aa10.35□□□□□ -0.75
LINC00963-215ENST00000622972 SAMD1Q6SPF0 538 aaPredicted RBP10.35□□□□□ -0.75
LINC00963-215ENST00000622972 CHMP7Q8WUX9 453 aaPredicted RBP10.35□□□□□ -0.75
LINC00963-215ENST00000622972 SYNJ1O43426 1573 aa10.35□□□□□ -0.75
LINC00963-215ENST00000622972 SNAPC4Q5SXM2 1469 aa10.33□□□□□ -0.76
LINC00963-215ENST00000622972 BIVM-ERCC5R4GMW8 1640 aa10.33□□□□□ -0.76
LINC00963-215ENST00000622972 WDR97A6NE52 1622 aa10.31□□□□□ -0.76
LINC00963-215ENST00000622972 GRIN2BQ13224 1484 aa10.3□□□□□ -0.76
LINC00963-215ENST00000622972 ATXN8OSP0DMR3 200 aa10.3□□□□□ -0.76
LINC00963-215ENST00000622972 APLP2Q06481 763 aa10.3□□□□□ -0.76
LINC00963-215ENST00000622972 MAGI1Q96QZ7 1491 aaPredicted RBP10.29□□□□□ -0.76
LINC00963-215ENST00000622972 TRHP20396 242 aaPredicted RBP10.28□□□□□ -0.76
LINC00963-215ENST00000622972 C1QBPQ07021 282 aaKnown RBP10.28□□□□□ -0.76
LINC00963-215ENST00000622972 TOP2BQ02880 1626 aa10.28□□□□□ -0.76
LINC00963-215ENST00000622972 GAPVD1Q14C86 1478 aa10.28□□□□□ -0.76
LINC00963-215ENST00000622972 PBRM1Q86U86 1689 aa10.27□□□□□ -0.77
LINC00963-215ENST00000622972 SYNJ2O15056 1496 aa10.25□□□□□ -0.77
LINC00963-215ENST00000622972 ARAP1Q96P48 1450 aa10.25□□□□□ -0.77
LINC00963-215ENST00000622972 WRNQ14191 1432 aaPredicted RBP eCLIP10.24□□□□□ -0.77
LINC00963-215ENST00000622972 ABCA10Q8WWZ4 1543 aa10.23□□□□□ -0.77
LINC00963-215ENST00000622972 CLASP1Q7Z460 1538 aa10.22□□□□□ -0.77
LINC00963-215ENST00000622972 ABCA5Q8WWZ7 1642 aa10.22□□□□□ -0.77
LINC00963-215ENST00000622972 GRIN2AQ12879 1464 aa10.17□□□□□ -0.78
LINC00963-215ENST00000622972 ADAMTS12P58397 1594 aa10.15□□□□□ -0.78
LINC00963-215ENST00000622972 ATF5Q9Y2D1 282 aaPredicted RBP10.15□□□□□ -0.78
LINC00963-215ENST00000622972 CAPN15O75808 1086 aa10.14□□□□□ -0.79
LINC00963-215ENST00000622972 FHAD1B1AJZ9 1412 aa10.14□□□□□ -0.79
LINC00963-215ENST00000622972 SPINK5Q9NQ38 1064 aaPredicted RBP10.12□□□□□ -0.79
LINC00963-215ENST00000622972 ERICH3Q5RHP9 1530 aa10.12□□□□□ -0.79
LINC00963-215ENST00000622972 CEP170Q5SW79 1584 aa10.11□□□□□ -0.79
LINC00963-215ENST00000622972 CACNB1Q02641 598 aaPredicted RBP10.1□□□□□ -0.79
LINC00963-215ENST00000622972 ZNF219Q9P2Y4 722 aaPredicted RBP10.1□□□□□ -0.79
LINC00963-215ENST00000622972 NUP160Q12769 1436 aa10.09□□□□□ -0.79
LINC00963-215ENST00000622972 RUSC2Q8N2Y8 1516 aa10.08□□□□□ -0.8
LINC00963-215ENST00000622972 ERCC6L2Q5T890 1561 aa10.08□□□□□ -0.8
LINC00963-215ENST00000622972 JPH4Q96JJ6 628 aa10.06□□□□□ -0.8
LINC00963-215ENST00000622972 KIF27Q86VH2 1401 aa10.05□□□□□ -0.8
LINC00963-215ENST00000622972 PRG4Q92954 1404 aaPredicted RBP10.05□□□□□ -0.8
LINC00963-215ENST00000622972 SHROOM2Q13796 1616 aa10.04□□□□□ -0.8
LINC00963-215ENST00000622972 NPM1P06748 294 aaKnown RBP eCLIP10.02□□□□□ -0.81
LINC00963-215ENST00000622972 TTBK1Q5TCY1 1321 aaPredicted RBP10□□□□□ -0.81
LINC00963-215ENST00000622972 IGF1RP08069 1367 aa10□□□□□ -0.81
LINC00963-215ENST00000622972 CUL7Q14999 1698 aa9.99□□□□□ -0.81
LINC00963-215ENST00000622972 CARMIL1Q5VZK9 1371 aa9.97□□□□□ -0.81
LINC00963-215ENST00000622972 KIAA0586Q9BVV6 1533 aa9.97□□□□□ -0.81
LINC00963-215ENST00000622972 POLA2Q14181 598 aa9.94□□□□□ -0.82
LINC00963-215ENST00000622972 ABCB7O75027 752 aa9.93□□□□□ -0.82
LINC00963-215ENST00000622972 FAM69CQ0P6D2 419 aa9.93□□□□□ -0.82
LINC00963-215ENST00000622972 CARMIL2Q6F5E8 1435 aa9.91□□□□□ -0.82
LINC00963-215ENST00000622972 KIF13AQ9H1H9 1805 aa9.91□□□□□ -0.82
LINC00963-215ENST00000622972 PTPRGP23470 1445 aa9.9□□□□□ -0.82
LINC00963-215ENST00000622972 ADCY10Q96PN6 1610 aa9.9□□□□□ -0.82
LINC00963-215ENST00000622972 DSG3P32926 999 aa9.9□□□□□ -0.82
LINC00963-215ENST00000622972 IQGAP2Q13576 1575 aa9.89□□□□□ -0.83
LINC00963-215ENST00000622972 PRXQ9BXM0 1461 aa9.89□□□□□ -0.83
LINC00963-215ENST00000622972 CTTNBP2Q8WZ74 1663 aa9.89□□□□□ -0.83
LINC00963-215ENST00000622972 TNIKQ9UKE5 1360 aa9.88□□□□□ -0.83
LINC00963-215ENST00000622972 ABCC10Q5T3U5 1492 aa9.88□□□□□ -0.83
LINC00963-215ENST00000622972 MAPKBP1O60336 1514 aa9.87□□□□□ -0.83
LINC00963-215ENST00000622972 RAPGEF2Q9Y4G8 1499 aa9.87□□□□□ -0.83
LINC00963-215ENST00000622972 KIF21BO75037 1637 aa9.86□□□□□ -0.83
LINC00963-215ENST00000622972 TSPOAP1O95153 1857 aa9.86□□□□□ -0.83
LINC00963-215ENST00000622972 DIP2BQ9P265 1576 aa9.84□□□□□ -0.83
LINC00963-215ENST00000622972 EEA1Q15075 1411 aa9.82□□□□□ -0.84
LINC00963-215ENST00000622972 ABCC2Q92887 1545 aa9.82□□□□□ -0.84
LINC00963-215ENST00000622972 UACAQ9BZF9 1416 aa9.82□□□□□ -0.84
LINC00963-215ENST00000622972 FAM9AQ8IZU1 332 aaPredicted RBP9.81□□□□□ -0.84
LINC00963-215ENST00000622972 ZBTB12Q9Y330 459 aaPredicted RBP9.81□□□□□ -0.84
LINC00963-215ENST00000622972 DISP1Q96F81 1524 aa9.81□□□□□ -0.84
LINC00963-215ENST00000622972 KDM6BO15054 1643 aa9.8□□□□□ -0.84
LINC00963-215ENST00000622972 ASXL2Q76L83 1435 aa9.8□□□□□ -0.84
LINC00963-215ENST00000622972 PLB1Q6P1J6 1458 aa9.79□□□□□ -0.84
LINC00963-215ENST00000622972 UGGT2Q9NYU1 1516 aa9.79□□□□□ -0.84
LINC00963-215ENST00000622972 KIAA0556O60303 1618 aa9.78□□□□□ -0.84
LINC00963-215ENST00000622972 UHRF1BP1LA0JNW5 1464 aa9.78□□□□□ -0.84
LINC00963-215ENST00000622972 GOLGA3Q08378 1498 aa9.77□□□□□ -0.85
LINC00963-215ENST00000622972 ZCCHC11Q5TAX3 1644 aaKnown RBP9.75□□□□□ -0.85
LINC00963-215ENST00000622972 P3H3Q8IVL6 736 aa9.75□□□□□ -0.85
LINC00963-215ENST00000622972 SAMD9Q5K651 1589 aa9.75□□□□□ -0.85
LINC00963-215ENST00000622972 KDM5BQ9UGL1 1544 aa9.74□□□□□ -0.85
LINC00963-215ENST00000622972 RANGAP1P46060 587 aaPredicted RBP9.74□□□□□ -0.85
LINC00963-215ENST00000622972 KCNH8Q96L42 1107 aa9.74□□□□□ -0.85
LINC00963-215ENST00000622972 ARID3CA6NKF2 412 aa9.73□□□□□ -0.85
LINC00963-215ENST00000622972 EPRSP07814 1512 aaKnown RBP9.72□□□□□ -0.85
LINC00963-215ENST00000622972 GLI2P10070 1586 aa9.72□□□□□ -0.85
LINC00963-215ENST00000622972 MKRN4PQ13434 485 aaPredicted RBP9.71□□□□□ -0.86
LINC00963-215ENST00000622972 TEX14Q8IWB6 1497 aa9.71□□□□□ -0.86
LINC00963-215ENST00000622972 WDR7Q9Y4E6 1490 aa9.7□□□□□ -0.86
LINC00963-215ENST00000622972 PPRC1Q5VV67 1664 aaKnown RBP9.7□□□□□ -0.86
LINC00963-215ENST00000622972 MAP3K4Q9Y6R4 1608 aa9.68□□□□□ -0.86
LINC00963-215ENST00000622972 ABCA8O94911 1581 aa9.68□□□□□ -0.86
LINC00963-215ENST00000622972 FKBP8Q14318 412 aa9.68□□□□□ -0.86
LINC00963-215ENST00000622972 LRRIQ1Q96JM4 1722 aa9.68□□□□□ -0.86
LINC00963-215ENST00000622972 CD109Q6YHK3 1445 aa9.66□□□□□ -0.86
LINC00963-215ENST00000622972 KDM4FA0A1W2PPD8 638 aa9.66□□□□□ -0.86
LINC00963-215ENST00000622972 ARHGAP35Q9NRY4 1499 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms