RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 KIF27Q86VH2 1401 aa30.89■■■□□ 2.54
PCSK6-220ENST00000622483 IRX6P78412 446 aaPredicted RBP30.88■■■□□ 2.53
PCSK6-220ENST00000622483 P3H3Q8IVL6 736 aa30.87■■■□□ 2.53
PCSK6-220ENST00000622483 CLIP1P30622 1438 aa30.87■■■□□ 2.53
PCSK6-220ENST00000622483 BIVM-ERCC5R4GMW8 1640 aa30.85■■■□□ 2.53
PCSK6-220ENST00000622483 PDS5BQ9NTI5 1447 aa30.84■■■□□ 2.53
PCSK6-220ENST00000622483 TOPBP1Q92547 1522 aa30.81■■■□□ 2.52
PCSK6-220ENST00000622483 URB2Q14146 1524 aaKnown RBP30.81■■■□□ 2.52
PCSK6-220ENST00000622483 POLA1P09884 1462 aaPredicted RBP30.77■■■□□ 2.52
PCSK6-220ENST00000622483 IGF1RP08069 1367 aa30.75■■■□□ 2.51
PCSK6-220ENST00000622483 LAMC3Q9Y6N6 1575 aa30.71■■■□□ 2.51
PCSK6-220ENST00000622483 ATP1B4Q9UN42 357 aaPredicted RBP30.7■■■□□ 2.51
PCSK6-220ENST00000622483 KIF21AQ7Z4S6 1674 aa30.69■■■□□ 2.5
PCSK6-220ENST00000622483 VPS8Q8N3P4 1428 aa30.69■■■□□ 2.5
PCSK6-220ENST00000622483 KANK4Q5T7N3 995 aaPredicted RBP30.69■■■□□ 2.5
PCSK6-220ENST00000622483 ERCC6Q03468 1493 aa30.68■■■□□ 2.5
PCSK6-220ENST00000622483 CARMIL1Q5VZK9 1371 aa30.66■■■□□ 2.5
PCSK6-220ENST00000622483 PRDM2Q13029 1718 aa30.63■■■□□ 2.49
PCSK6-220ENST00000622483 DNMBPQ6XZF7 1577 aa30.6■■■□□ 2.49
PCSK6-220ENST00000622483 DEKP35659 375 aaKnown RBP30.59■■■□□ 2.49
PCSK6-220ENST00000622483 PRXQ9BXM0 1461 aa30.58■■■□□ 2.49
PCSK6-220ENST00000622483 AQRO60306 1485 aaKnown RBP eCLIP30.55■■■□□ 2.486e-7■■□□□ 11.9
PCSK6-220ENST00000622483 FBLN2P98095 1184 aa30.54■■■□□ 2.48
PCSK6-220ENST00000622483 NBR1Q14596 966 aa30.54■■■□□ 2.48
PCSK6-220ENST00000622483 SIN3AQ96ST3 1273 aa30.54■■■□□ 2.48
PCSK6-220ENST00000622483 ANO8Q9HCE9 1232 aaPredicted RBP30.53■■■□□ 2.48
PCSK6-220ENST00000622483 CDK11AQ9UQ88 783 aaPredicted RBP30.53■■■□□ 2.48
PCSK6-220ENST00000622483 KIF21BO75037 1637 aa30.51■■■□□ 2.47
PCSK6-220ENST00000622483 ANP32CO43423 234 aa30.42■■■□□ 2.46
PCSK6-220ENST00000622483 FANCIQ9NVI1 1328 aa30.42■■■□□ 2.46
PCSK6-220ENST00000622483 ARID3CA6NKF2 412 aa30.41■■■□□ 2.46
PCSK6-220ENST00000622483 ZNF608Q9ULD9 1512 aaPredicted RBP30.39■■■□□ 2.46
PCSK6-220ENST00000622483 ABCA10Q8WWZ4 1543 aa30.37■■■□□ 2.45
PCSK6-220ENST00000622483 HNRNPUQ00839 825 aaKnown RBP eCLIP30.36■■■□□ 2.45
PCSK6-220ENST00000622483 GAPVD1Q14C86 1478 aa30.36■■■□□ 2.45
PCSK6-220ENST00000622483 MRC2Q9UBG0 1479 aa30.36■■■□□ 2.45
PCSK6-220ENST00000622483 PPP1R15AO75807 674 aaPredicted RBP30.34■■■□□ 2.45
PCSK6-220ENST00000622483 ARAP1Q96P48 1450 aa30.3■■■□□ 2.44
PCSK6-220ENST00000622483 CCDC136Q96JN2 1154 aa30.27■■■□□ 2.44
PCSK6-220ENST00000622483 RAB3GAP2Q9H2M9 1393 aa30.26■■■□□ 2.43
PCSK6-220ENST00000622483 WDR97A6NE52 1622 aa30.25■■■□□ 2.43
PCSK6-220ENST00000622483 B4GALNT3Q6L9W6 998 aa30.24■■■□□ 2.43
PCSK6-220ENST00000622483 RTN4Q9NQC3 1192 aaKnown RBP30.24■■■□□ 2.43
PCSK6-220ENST00000622483 ERICH3Q5RHP9 1530 aa30.23■■■□□ 2.43
PCSK6-220ENST00000622483 SALL2Q9Y467 1007 aaPredicted RBP30.23■■■□□ 2.43
PCSK6-220ENST00000622483 PAK3O75914 559 aaPredicted RBP30.21■■■□□ 2.43
PCSK6-220ENST00000622483 ARHGAP35Q9NRY4 1499 aa30.19■■■□□ 2.42
PCSK6-220ENST00000622483 FHOD3Q2V2M9 1422 aa30.17■■■□□ 2.42
PCSK6-220ENST00000622483 CCNB3Q8WWL7 1395 aa30.17■■■□□ 2.42
PCSK6-220ENST00000622483 CCER2I3L3R5 266 aa30.15■■■□□ 2.42
PCSK6-220ENST00000622483 FAM50AQ14320 339 aaKnown RBP30.11■■■□□ 2.41
PCSK6-220ENST00000622483 CHMP7Q8WUX9 453 aaPredicted RBP30.11■■■□□ 2.41
PCSK6-220ENST00000622483 MAPKBP1O60336 1514 aa30.1■■■□□ 2.41
PCSK6-220ENST00000622483 TARBP1Q13395 1621 aaKnown RBP30.09■■■□□ 2.41
PCSK6-220ENST00000622483 NOP58Q9Y2X3 529 aaKnown RBP30.06■■■□□ 2.4
PCSK6-220ENST00000622483 IL27Q8NEV9 243 aa30.05■■■□□ 2.4
PCSK6-220ENST00000622483 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.04■■■□□ 2.4
PCSK6-220ENST00000622483 RRBP1Q9P2E9 1410 aaKnown RBP30.04■■■□□ 2.4
PCSK6-220ENST00000622483 ABCA5Q8WWZ7 1642 aa29.99■■■□□ 2.39
PCSK6-220ENST00000622483 MYT1LQ9UL68 1186 aa29.98■■■□□ 2.39
PCSK6-220ENST00000622483 WDR62O43379 1518 aa29.97■■■□□ 2.39
PCSK6-220ENST00000622483 PPP4R2Q9NY27 417 aa29.97■■■□□ 2.39
PCSK6-220ENST00000622483 SENP3-EIF4A1A0A087X0R7 540 aa29.97■■■□□ 2.39
PCSK6-220ENST00000622483 SNAPC4Q5SXM2 1469 aa29.95■■■□□ 2.39
PCSK6-220ENST00000622483 IFT140Q96RY7 1462 aa29.95■■■□□ 2.38
PCSK6-220ENST00000622483 CNGB1Q14028 1251 aaPredicted RBP29.92■■■□□ 2.38
PCSK6-220ENST00000622483 CCDC184Q52MB2 194 aa29.92■■■□□ 2.38
PCSK6-220ENST00000622483 FAM9BQ8IZU0 186 aa29.91■■■□□ 2.38
PCSK6-220ENST00000622483 GRIN2BQ13224 1484 aa29.91■■■□□ 2.38
PCSK6-220ENST00000622483 THOC2Q8NI27 1593 aaKnown RBP29.88■■■□□ 2.37
PCSK6-220ENST00000622483 RTL5Q5HYW3 569 aaPredicted RBP29.88■■■□□ 2.37
PCSK6-220ENST00000622483 SETD5Q9C0A6 1442 aa29.86■■■□□ 2.37
PCSK6-220ENST00000622483 FHAD1B1AJZ9 1412 aa29.85■■■□□ 2.37
PCSK6-220ENST00000622483 EIF4G3O43432 1585 aaKnown RBP29.81■■■□□ 2.36
PCSK6-220ENST00000622483 CUL7Q14999 1698 aa29.8■■■□□ 2.36
PCSK6-220ENST00000622483 PBRM1Q86U86 1689 aa29.76■■■□□ 2.35
PCSK6-220ENST00000622483 NPM2Q86SE8 214 aaKnown RBP29.74■■■□□ 2.35
PCSK6-220ENST00000622483 TONSLQ96HA7 1378 aa29.74■■■□□ 2.35
PCSK6-220ENST00000622483 ZBTB47Q9UFB7 747 aaPredicted RBP29.7■■■□□ 2.34
PCSK6-220ENST00000622483 ANP32AP39687 249 aaKnown RBP29.69■■■□□ 2.34
PCSK6-220ENST00000622483 LAS1LQ9Y4W2 734 aaKnown RBP29.68■■■□□ 2.34
PCSK6-220ENST00000622483 ADAMTS12P58397 1594 aa29.67■■■□□ 2.34
PCSK6-220ENST00000622483 PHLDB1Q86UU1 1377 aa29.65■■■□□ 2.34
PCSK6-220ENST00000622483 PCF11O94913 1555 aaKnown RBP29.65■■■□□ 2.34
PCSK6-220ENST00000622483 JPH4Q96JJ6 628 aa29.65■■■□□ 2.34
PCSK6-220ENST00000622483 IPO9Q96P70 1041 aaKnown RBP29.63■■■□□ 2.33
PCSK6-220ENST00000622483 GRIN2AQ12879 1464 aa29.62■■■□□ 2.33
PCSK6-220ENST00000622483 MRS2Q9HD23 443 aa29.61■■■□□ 2.33
PCSK6-220ENST00000622483 CTTNBP2Q8WZ74 1663 aa29.6■■■□□ 2.33
PCSK6-220ENST00000622483 WASHC2AQ641Q2 1341 aa29.57■■■□□ 2.32
PCSK6-220ENST00000622483 MTUS2Q5JR59 1369 aa29.57■■■□□ 2.32
PCSK6-220ENST00000622483 ERICH6BQ5W0A0 696 aa29.55■■■□□ 2.32
PCSK6-220ENST00000622483 EIF5BO60841 1220 aaKnown RBP29.54■■■□□ 2.32
PCSK6-220ENST00000622483 IQGAP2Q13576 1575 aa29.53■■■□□ 2.32
PCSK6-220ENST00000622483 HSPA5P11021 654 aaKnown RBP29.53■■■□□ 2.32
PCSK6-220ENST00000622483 TIMELESSQ9UNS1 1208 aa29.51■■■□□ 2.32
PCSK6-220ENST00000622483 FMN1Q68DA7 1419 aa29.51■■■□□ 2.31
PCSK6-220ENST00000622483 SYNJ2O15056 1496 aa29.49■■■□□ 2.31
PCSK6-220ENST00000622483 NEFMP07197 916 aa29.49■■■□□ 2.31
PCSK6-220ENST00000622483 AKNAQ7Z591 1439 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms