RNA–Protein interactions for RNA: ENST00000619120.4

SAMSN1-206, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-206ENST00000619120 SYNJ1O43426 1573 aa8.68□□□□□ -1.02
SAMSN1-206ENST00000619120 REM2Q8IYK8 340 aaPredicted RBP8.68□□□□□ -1.02
SAMSN1-206ENST00000619120 PROM2Q8N271 834 aa8.67□□□□□ -1.02
SAMSN1-206ENST00000619120 SOGA1O94964 1423 aa8.66□□□□□ -1.02
SAMSN1-206ENST00000619120 RUSC2Q8N2Y8 1516 aa8.65□□□□□ -1.02
SAMSN1-206ENST00000619120 WRNQ14191 1432 aaPredicted RBP eCLIP8.65□□□□□ -1.02
SAMSN1-206ENST00000619120 CC2D2AQ9P2K1 1620 aa8.64□□□□□ -1.03
SAMSN1-206ENST00000619120 HAX1O00165 279 aa8.63□□□□□ -1.03
SAMSN1-206ENST00000619120 SPDYE1Q8NFV5 336 aaPredicted RBP8.59□□□□□ -1.03
SAMSN1-206ENST00000619120 CFTRP13569 1480 aa8.59□□□□□ -1.03
SAMSN1-206ENST00000619120 TOP2BQ02880 1626 aa8.59□□□□□ -1.03
SAMSN1-206ENST00000619120 PITPNM1O00562 1244 aa8.58□□□□□ -1.04
SAMSN1-206ENST00000619120 BIVM-ERCC5R4GMW8 1640 aa8.58□□□□□ -1.04
SAMSN1-206ENST00000619120 LHX8Q68G74 356 aa8.58□□□□□ -1.04
SAMSN1-206ENST00000619120 PCGF6Q9BYE7 350 aa8.56□□□□□ -1.04
SAMSN1-206ENST00000619120 CUX1P39880 1505 aa8.55□□□□□ -1.04
SAMSN1-206ENST00000619120 PRDM2Q13029 1718 aa8.55□□□□□ -1.04
SAMSN1-206ENST00000619120 PIP4P2Q8N4L2 257 aa8.55□□□□□ -1.04
SAMSN1-206ENST00000619120 EEA1Q15075 1411 aa8.55□□□□□ -1.04
SAMSN1-206ENST00000619120 STAG3Q9UJ98 1225 aa8.52□□□□□ -1.05
SAMSN1-206ENST00000619120 CLEC11AQ9Y240 323 aa8.52□□□□□ -1.05
SAMSN1-206ENST00000619120 CADPSQ9ULU8 1353 aa8.51□□□□□ -1.05
SAMSN1-206ENST00000619120 KIF21BO75037 1637 aa8.5□□□□□ -1.05
SAMSN1-206ENST00000619120 CEP162Q5TB80 1403 aa8.5□□□□□ -1.05
SAMSN1-206ENST00000619120 TNIKQ9UKE5 1360 aa8.49□□□□□ -1.05
SAMSN1-206ENST00000619120 GOLGA3Q08378 1498 aa8.48□□□□□ -1.05
SAMSN1-206ENST00000619120 NESP48681 1621 aa8.47□□□□□ -1.05
SAMSN1-206ENST00000619120 RAPGEF2Q9Y4G8 1499 aa8.47□□□□□ -1.05
SAMSN1-206ENST00000619120 CEP164Q9UPV0 1460 aa8.46□□□□□ -1.05
SAMSN1-206ENST00000619120 TRIM26Q12899 539 aaPredicted RBP8.46□□□□□ -1.05
SAMSN1-206ENST00000619120 PRR29P0C7W0 189 aa8.45□□□□□ -1.06
SAMSN1-206ENST00000619120 FXR2P51116 673 aaKnown RBP eCLIP8.45□□□□□ -1.064e-7■□□□□ 8.9
SAMSN1-206ENST00000619120 HRCP23327 699 aa8.44□□□□□ -1.06
SAMSN1-206ENST00000619120 FBXO3Q9UK99 471 aa8.44□□□□□ -1.06
SAMSN1-206ENST00000619120 PRXQ9BXM0 1461 aa8.43□□□□□ -1.06
SAMSN1-206ENST00000619120 FANCD2Q9BXW9 1451 aa8.43□□□□□ -1.06
SAMSN1-206ENST00000619120 PPARGC1BQ86YN6 1023 aaKnown RBP8.42□□□□□ -1.06
SAMSN1-206ENST00000619120 UBTFP17480 764 aaKnown RBP8.42□□□□□ -1.06
SAMSN1-206ENST00000619120 EVX2Q03828 476 aa8.41□□□□□ -1.06
SAMSN1-206ENST00000619120 FGD5Q6ZNL6 1462 aa8.41□□□□□ -1.06
SAMSN1-206ENST00000619120 ERICH3Q5RHP9 1530 aa8.4□□□□□ -1.07
SAMSN1-206ENST00000619120 KIF27Q86VH2 1401 aa8.39□□□□□ -1.07
SAMSN1-206ENST00000619120 LAMC3Q9Y6N6 1575 aa8.38□□□□□ -1.07
SAMSN1-206ENST00000619120 DNMBPQ6XZF7 1577 aa8.38□□□□□ -1.07
SAMSN1-206ENST00000619120 CLIP1P30622 1438 aa8.37□□□□□ -1.07
SAMSN1-206ENST00000619120 CUX2O14529 1486 aa8.37□□□□□ -1.07
SAMSN1-206ENST00000619120 TOPBP1Q92547 1522 aa8.37□□□□□ -1.07
SAMSN1-206ENST00000619120 URB2Q14146 1524 aaKnown RBP8.36□□□□□ -1.07
SAMSN1-206ENST00000619120 CREBZFQ9NS37 354 aa8.36□□□□□ -1.07
SAMSN1-206ENST00000619120 POLA1P09884 1462 aaPredicted RBP8.35□□□□□ -1.07
SAMSN1-206ENST00000619120 IGF1RP08069 1367 aa8.35□□□□□ -1.07
SAMSN1-206ENST00000619120 PRKAR2AP13861 404 aaKnown RBP8.35□□□□□ -1.07
SAMSN1-206ENST00000619120 KIF21AQ7Z4S6 1674 aa8.35□□□□□ -1.07
SAMSN1-206ENST00000619120 RAD54L2Q9Y4B4 1467 aa8.35□□□□□ -1.07
SAMSN1-206ENST00000619120 VASPP50552 380 aaPredicted RBP8.33□□□□□ -1.08
SAMSN1-206ENST00000619120 CHADLQ6NUI6 762 aa8.33□□□□□ -1.08
SAMSN1-206ENST00000619120 WDR97A6NE52 1622 aa8.32□□□□□ -1.08
SAMSN1-206ENST00000619120 ABCA10Q8WWZ4 1543 aa8.32□□□□□ -1.08
SAMSN1-206ENST00000619120 ARAP1Q96P48 1450 aa8.32□□□□□ -1.08
SAMSN1-206ENST00000619120 VPS8Q8N3P4 1428 aa8.32□□□□□ -1.08
SAMSN1-206ENST00000619120 TTBK1Q5TCY1 1321 aaPredicted RBP8.31□□□□□ -1.08
SAMSN1-206ENST00000619120 RANGAP1P46060 587 aaPredicted RBP8.3□□□□□ -1.08
SAMSN1-206ENST00000619120 MIER1Q8N108 512 aa8.3□□□□□ -1.08
SAMSN1-206ENST00000619120 MNX1P50219 401 aaPredicted RBP8.29□□□□□ -1.08
SAMSN1-206ENST00000619120 PLCD3Q8N3E9 789 aa8.29□□□□□ -1.08
SAMSN1-206ENST00000619120 PDS5BQ9NTI5 1447 aa8.28□□□□□ -1.08
SAMSN1-206ENST00000619120 ARHGAP35Q9NRY4 1499 aa8.28□□□□□ -1.08
SAMSN1-206ENST00000619120 CARMIL1Q5VZK9 1371 aa8.27□□□□□ -1.09
SAMSN1-206ENST00000619120 ABCA5Q8WWZ7 1642 aa8.27□□□□□ -1.09
SAMSN1-206ENST00000619120 PLEKHG5O94827 1062 aa8.27□□□□□ -1.09
SAMSN1-206ENST00000619120 FARP1Q9Y4F1 1045 aaPredicted RBP8.27□□□□□ -1.09
SAMSN1-206ENST00000619120 TARBP1Q13395 1621 aaKnown RBP8.26□□□□□ -1.09
SAMSN1-206ENST00000619120 TDRD9Q8NDG6 1382 aaKnown RBP8.24□□□□□ -1.09
SAMSN1-206ENST00000619120 ZBTB47Q9UFB7 747 aaPredicted RBP8.23□□□□□ -1.09
SAMSN1-206ENST00000619120 CUL7Q14999 1698 aa8.23□□□□□ -1.09
SAMSN1-206ENST00000619120 GABBR2O75899 941 aa8.22□□□□□ -1.09
SAMSN1-206ENST00000619120 IFNLR1Q8IU57 520 aaPredicted RBP8.21□□□□□ -1.1
SAMSN1-206ENST00000619120 MRC2Q9UBG0 1479 aa8.21□□□□□ -1.1
SAMSN1-206ENST00000619120 GAPVD1Q14C86 1478 aa8.2□□□□□ -1.1
SAMSN1-206ENST00000619120 KANK4Q5T7N3 995 aaPredicted RBP8.2□□□□□ -1.1
SAMSN1-206ENST00000619120 CTTNBP2Q8WZ74 1663 aa8.2□□□□□ -1.1
SAMSN1-206ENST00000619120 NPM1P06748 294 aaKnown RBP eCLIP8.19□□□□□ -1.1
SAMSN1-206ENST00000619120 WDR62O43379 1518 aa8.19□□□□□ -1.1
SAMSN1-206ENST00000619120 PBRM1Q86U86 1689 aa8.18□□□□□ -1.1
SAMSN1-206ENST00000619120 AQRO60306 1485 aaKnown RBP eCLIP8.16□□□□□ -1.13e-7■■■■■ 37.1
SAMSN1-206ENST00000619120 PCF11O94913 1555 aaKnown RBP8.16□□□□□ -1.1
SAMSN1-206ENST00000619120 C19orf67A6NJJ6 358 aa8.16□□□□□ -1.1
SAMSN1-206ENST00000619120 ZNF608Q9ULD9 1512 aaPredicted RBP8.16□□□□□ -1.1
SAMSN1-206ENST00000619120 THOC2Q8NI27 1593 aaKnown RBP8.16□□□□□ -1.1
SAMSN1-206ENST00000619120 KLHL34Q8N239 644 aa8.15□□□□□ -1.1
SAMSN1-206ENST00000619120 FHOD3Q2V2M9 1422 aa8.15□□□□□ -1.1
SAMSN1-206ENST00000619120 ADAMTS12P58397 1594 aa8.15□□□□□ -1.11
SAMSN1-206ENST00000619120 TIAM1Q13009 1591 aa8.15□□□□□ -1.11
SAMSN1-206ENST00000619120 SAMD9Q5K651 1589 aa8.14□□□□□ -1.11
SAMSN1-206ENST00000619120 NUBP1P53384 320 aa8.13□□□□□ -1.11
SAMSN1-206ENST00000619120 EFCAB5A4FU69 1503 aa8.13□□□□□ -1.11
SAMSN1-206ENST00000619120 CFAP43Q8NDM7 1665 aa8.12□□□□□ -1.11
SAMSN1-206ENST00000619120 ZEB1P37275 1124 aaPredicted RBP8.12□□□□□ -1.11
SAMSN1-206ENST00000619120 P3H3Q8IVL6 736 aa8.12□□□□□ -1.11
SAMSN1-206ENST00000619120 MAP3K1Q13233 1512 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms